Details of the Probe

General Information of Probe

Probe ID
LDPC0382
Probe Name
C140
Synonyms
Z3426114841
Probe Type
PAL-AfBPP Probe
Structure
3D MOL 2D MOL
Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 329.4
Lipid-water partition coefficient (xlogp) 2.2
Rotatable Bond Count (rotbonds) 8
Hydrogen Bond Donor Count (hbonddonor) 0
Hydrogen Bond Acceptor Count (hbondacc) 5
Chemical Identifiers
Formula
C18H20FN3O2
IUPAC Name
3-(3-but-3-ynyldiazirin-3-yl)-1-[3-[(2-fluorophenyl)methoxy]azetidin-1-yl]propan-1-one
Canonical SMILES
C#CCCC1(N=N1)CCC(=O)N2CC(C2)OCC3=CC=CC=C3F
InChI
InChI=1S/C18H20FN3O2/c1-2-3-9-18(20-21-18)10-8-17(23)22-11-15(12-22)24-13-14-6-4-5-7-16(14)19/h1,4-7,15H,3,8-13H2
InChIKey
RHABZUPCHMLOPL-UHFFFAOYSA-N

The Probe Interaction Atlas

Target(s) List of this Probe

96 Enzyme Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
3-ketodihydrosphingosine reductase (KDSR) LDTP05476 27.10  LDD1822 
5'-3' exonuclease PLD3 (PLD3) LDTP08476 7.73  LDD1822 
7-dehydrocholesterol reductase (DHCR7) LDTP13131 10.13  LDD1822 
7-methylguanosine phosphate-specific 5'-nucleotidase (NT5C3B) LDTP10032 38.85  LDD1822 
Acid ceramidase (ASAH1) LDTP05905 18.38  LDD1822 
ADP-dependent glucokinase (ADPGK) LDTP11127 8.28  LDD1822 
Aldehyde dehydrogenase family 3 member A2 (ALDH3A2) LDTP04437 8.06  LDD1822 
Aldehyde dehydrogenase, mitochondrial (ALDH2) LDTP02074 9.85  LDD1822 
Alpha-galactosidase A (GLA) LDTP02141 8.11  LDD1822 
Alpha-N-acetylglucosaminidase (NAGLU) LDTP04634 11.71  LDD1822 
Antigen peptide transporter 1 (TAP1) LDTP05408 16.56  LDD1822 
Beta-galactosidase (GLB1) LDTP02837 18.00  LDD1822 
Beta-glucuronidase (GUSB) LDTP02260 8.94  LDD1822 
Bis(monoacylglycero)phosphate synthase CLN5 (CLN5) LDTP01241 13.45  LDD1822 
CAAX prenyl protease 1 homolog (ZMPSTE24) LDTP01328 10.41  LDD1822 
Carbohydrate sulfotransferase 14 (CHST14) LDTP09096 11.79  LDD1822 
Carnitine O-palmitoyltransferase 2, mitochondrial (CPT2) LDTP03257 8.28  LDD1822 
Cartilage-associated protein (CRTAP) LDTP01300 8.34  LDD1822 
Catechol O-methyltransferase (COMT) LDTP03145 9.45  LDD1822 
Ceramide synthase 1 (CERS1) LDTP03394 9.32  LDD1822 
Ceramide synthase 2 (CERS2) LDTP10329 9.92  LDD1822 
Choline kinase alpha (CHKA) LDTP03787 8.00  LDD1822 
Cytochrome b-c1 complex subunit 8 (UQCRQ) LDTP00486 9.78  LDD1822 
Cytochrome b-c1 complex subunit 9 (UQCR10) LDTP13189 10.56  LDD1822 
Cytochrome b5 type B (CYB5B) LDTP00697 13.64  LDD1822 
Cytochrome P450 20A1 (CYP20A1) LDTP17410 8.40  LDD1822 
dCTP pyrophosphatase 1 (DCTPP1) LDTP12013 35.75  LDD1822 
Delta(14)-sterol reductase LBR (LBR) LDTP06200 12.47  LDD1822 
Delta(24)-sterol reductase (DHCR24) LDTP06375 19.70  LDD1822 
Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial (ECH1) LDTP05724 8.69  LDD1822 
Dihydrofolate reductase (DHFR) LDTP01769 8.40  LDD1822 
Endoplasmic reticulum protein SC65 (P3H4) LDTP09874 8.22  LDD1822 
Endoplasmic reticulum transmembrane helix translocase (ATP13A1) LDTP12279 13.93  LDD1822 
Endothelin-converting enzyme 1 (ECE1) LDTP04008 8.46  LDD1822 
FAD-dependent oxidoreductase domain-containing protein 1 (FOXRED1) LDTP10188 11.00  LDD1822 
Glycerol-3-phosphate acyltransferase 1, mitochondrial (GPAM) LDTP12253 37.79  LDD1822 
Heme oxygenase 1 (HMOX1) LDTP02359 20.53  LDD1822 
Heme oxygenase 2 (HMOX2) LDTP03540 12.13  LDD1822 
Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HADH) LDTP06645 14.83  LDD1822 
Insulin-degrading enzyme (IDE) LDTP02743 17.75  LDD1822 
Isocitrate dehydrogenase [NADP], mitochondrial (IDH2) LDTP04211 8.22  LDD1822 
Lanosterol 14-alpha demethylase (CYP51A1) LDTP06648 9.92  LDD1822 
Lanosterol synthase (LSS) LDTP04183 8.28  LDD1822 
Leucyl-cystinyl aminopeptidase (LNPEP) LDTP13358 11.96  LDD1822 
Leukotriene A-4 hydrolase (LTA4H) LDTP02385 41.07  LDD1822 
Lipid droplet-associated hydrolase (LDAH) LDTP16007 51.63  LDD1822 
Lysophosphatidic acid phosphatase type 6 (ACP6) LDTP12363 14.52  LDD1822 
Lysosomal acid glucosylceramidase (GBA1) LDTP02005 13.00  LDD1822 
Lysosomal acid phosphatase (ACP2) LDTP02539 8.17  LDD1822 
Lysosomal alpha-glucosidase (GAA) LDTP02486 9.00  LDD1822 
Lysosomal Pro-X carboxypeptidase (PRCP) LDTP04004 17.39  LDD1822 
Lysosomal protective protein (CTSA) LDTP02505 11.31  LDD1822 
Lysosomal thioesterase PPT2 (PPT2) LDTP13620 12.13  LDD1822 
Methylsterol monooxygenase 1 (MSMO1) LDTP06477 13.55  LDD1822 
Mitochondrial cardiolipin hydrolase (PLD6) LDTP08790 19.70  LDD1822 
N-acetylglucosamine-6-sulfatase (GNS) LDTP02799 8.17  LDD1822 
N-terminal Xaa-Pro-Lys N-methyltransferase 1 (NTMT1) LDTP11273 7.94  LDD1822 
NAD(P) transhydrogenase, mitochondrial (NNT) LDTP05862 11.63  LDD1822 
NAD-dependent protein deacetylase sirtuin-2 (SIRT2) LDTP08598 9.38  LDD1822 
NADH dehydrogenase 1 beta subcomplex subunit 3 (NDUFB3) LDTP00832 15.89  LDD1822 
Nicotinamide phosphoribosyltransferase (NAMPT) LDTP04051 28.05  LDD1822 
Obg-like ATPase 1 (OLA1) LDTP12610 7.94  LDD1822 
Palmitoyl-protein thioesterase 1 (PPT1) LDTP04388 29.04  LDD1822 
Palmitoyl-protein thioesterase ABHD10, mitochondrial (ABHD10) LDTP12628 12.38  LDD1822 
Peptidyl-prolyl cis-trans isomerase FKBP14 (FKBP14) LDTP12720 8.34  LDD1822 
Peroxisomal acyl-coenzyme A oxidase 3 (ACOX3) LDTP00589 8.82  LDD1822 
Phospholipase A2 group XV (PLA2G15) LDTP09088 8.40  LDD1822 
Pirin (PIR) LDTP00325 7.78  LDD1822 
Plasma alpha-L-fucosidase (FUCA2) LDTP11215 8.00  LDD1822 
Prenylcysteine oxidase 1 (PCYOX1) LDTP13282 21.41  LDD1822 
Probable serine carboxypeptidase CPVL (CPVL) LDTP15988 9.71  LDD1822 
Prostaglandin reductase 3 (PTGR3) LDTP15422 52.71  LDD1822 
Proteasome subunit beta type-2 (PSMB2) LDTP04285 15.24  LDD1822 
Proteasome subunit beta type-6 (PSMB6) LDTP03418 10.85  LDD1822 
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (FNTA) LDTP04246 21.86  LDD1822 
Protein SCO1 homolog, mitochondrial (SCO1) LDTP01335 9.99  LDD1822 
Protein-S-isoprenylcysteine O-methyltransferase (ICMT) LDTP01039 9.65  LDD1822 
Putative phospholipase B-like 2 (PLBD2) LDTP09256 11.31  LDD1822 
Reticulon-4-interacting protein 1, mitochondrial (RTN4IP1) LDTP09666 21.41  LDD1822 
Retinoid-inducible serine carboxypeptidase (SCPEP1) LDTP16032 19.16  LDD1822 
S-methyl-5'-thioadenosine phosphorylase (MTAP) LDTP05758 11.79  LDD1822 
Serine/threonine-protein phosphatase 4 regulatory subunit 3A (PPP4R3A) LDTP07417 11.24  LDD1822 
Signal peptide peptidase-like 2A (SPPL2A) LDTP09395 9.32  LDD1822 
Sphingomyelin phosphodiesterase (SMPD1) LDTP02896 8.40  LDD1822 
Sphingosine kinase 2 (SPHK2) LDTP12490 14.62  LDD1822 
Sphingosine-1-phosphate lyase 1 (SGPL1) LDTP01613 7.73  LDD1822 
Squalene synthase (FDFT1) LDTP03842 11.16  LDD1822 
Sterol O-acyltransferase 1 (SOAT1) LDTP03769 7.73  LDD1822 
Thioredoxin domain-containing protein 12 (TXNDC12) LDTP01707 8.11  LDD1822 
Tissue alpha-L-fucosidase (FUCA1) LDTP02006 8.11  LDD1822 
Trimethylguanosine synthase (TGS1) LDTP10780 10.34  LDD1822 
Tripeptidyl-peptidase 1 (TPP1) LDTP00428 13.74  LDD1822 
Tyrosine-protein phosphatase non-receptor type 23 (PTPN23) LDTP11887 9.25  LDD1822 
Ubiquitin thioesterase OTUB1 (OTUB1) LDTP10318 8.46  LDD1822 
V-type proton ATPase 116 kDa subunit a 2 (ATP6V0A2) LDTP14030 16.22  LDD1822 
Very-long-chain enoyl-CoA reductase (TECR) LDTP12867 9.99  LDD1822 
------------------------------------------------------------------------------------
⏷ Show the Full List of 96 Enzyme
52 Transporter and channel Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
ADP/ATP translocase 1 (SLC25A4) LDTP02608 12.82  LDD1822 
ATP synthase subunit g, mitochondrial (ATP5MG) LDTP14511 20.68  LDD1822 
BOS complex subunit NCLN (NCLN) LDTP10036 9.65  LDD1822 
BRI3-binding protein (BRI3BP) LDTP15648 9.78  LDD1822 
Calcium uniporter regulatory subunit MCUb, mitochondrial (MCUB) LDTP12725 8.00  LDD1822 
Cytochrome c oxidase subunit 7A2, mitochondrial (COX7A2) LDTP02724 14.83  LDD1822 
Cytoskeleton-associated protein 4 (CKAP4) LDTP05511 7.89  LDD1822 
ER lumen protein-retaining receptor 1 (KDELR1) LDTP03277 25.99  LDD1822 
ER membrane protein complex subunit 5 (MMGT1) LDTP08878 8.94  LDD1822 
H(+)/Cl(-) exchange transporter 7 (CLCN7) LDTP04463 9.99  LDD1822 
Importin-9 (IPO9) LDTP10663 12.64  LDD1822 
Integral membrane protein 2C (ITM2C) LDTP12451 7.84  LDD1822 
Lysosome membrane protein 2 (SCARB2) LDTP06034 14.32  LDD1822 
Major facilitator superfamily domain-containing protein 3 (MFSD3) LDTP18153 15.03  LDD1822 
Metaxin-1 (MTX1) LDTP05900 12.38  LDD1822 
Mitochondrial carnitine/acylcarnitine carrier protein (SLC25A20) LDTP00865 8.34  LDD1822 
Mitochondrial dicarboxylate carrier (SLC25A10) LDTP13174 9.45  LDD1822 
Mitochondrial import inner membrane translocase subunit Tim17-A (TIMM17A) LDTP10913 83.87  LDD1822 
Mitochondrial import inner membrane translocase subunit Tim17-B (TIMM17B) LDTP01059 44.94  LDD1822 
Mitochondrial S-adenosylmethionine carrier protein (SLC25A26) LDTP07885 11.63  LDD1822 
Mpv17-like protein 2 (MPV17L2) LDTP14952 34.30  LDD1822 
NPC intracellular cholesterol transporter 2 (NPC2) LDTP04940 8.22  LDD1822 
Nucleoporin NDC1 (NDC1) LDTP11213 9.25  LDD1822 
Peroxisomal membrane protein 2 (PXMP2) LDTP16069 14.22  LDD1822 
Prosaposin (PSAP) LDTP02215 14.32  LDD1822 
Protein GPR107 (GPR107) LDTP07236 15.89  LDD1822 
Protein GPR108 (GPR108) LDTP12383 32.67  LDD1822 
Protein sel-1 homolog 1 (SEL1L) LDTP13164 8.57  LDD1822 
Protein spinster homolog 1 (SPNS1) LDTP11844 7.73  LDD1822 
Protein tweety homolog 3 (TTYH3) LDTP11615 15.45  LDD1822 
Proton-coupled amino acid transporter 1 (SLC36A1) LDTP08016 12.55  LDD1822 
Proton-coupled zinc antiporter SLC30A5 (SLC30A5) LDTP09294 8.40  LDD1822 
Scavenger receptor class B member 1 (SCARB1) LDTP09547 15.45  LDD1822 
Sigma intracellular receptor 2 (TMEM97) LDTP06945 11.00  LDD1822 
Sigma non-opioid intracellular receptor 1 (SIGMAR1) LDTP10958 24.93  LDD1822 
Solute carrier family 25 member 32 (SLC25A32) LDTP11813 19.56  LDD1822 
Solute carrier family 25 member 33 (SLC25A33) LDTP11162 8.00  LDD1822 
StAR-related lipid transfer protein 3 (STARD3) LDTP06221 7.84  LDD1822 
STARD3 N-terminal-like protein (STARD3NL) LDTP01671 12.30  LDD1822 
Stomatin (STOM) LDTP03380 8.22  LDD1822 
Syntenin-1 (SDCBP) LDTP00310 8.28  LDD1822 
Tetraspanin-3 (TSPAN3) LDTP16813 9.19  LDD1822 
Translocating chain-associated membrane protein 1 (TRAM1) LDTP06426 14.72  LDD1822 
Translocon-associated protein subunit alpha (SSR1) LDTP04033 9.71  LDD1822 
Transmembrane 9 superfamily member 3 (TM9SF3) LDTP18448 7.73  LDD1822 
Transmembrane emp24 domain-containing protein 7 (TMED7) LDTP13969 9.25  LDD1822 
Transmembrane protein 126A (TMEM126A) LDTP15948 11.63  LDD1822 
Transmembrane protein 199 (TMEM199) LDTP08881 20.68  LDD1822 
Transportin-1 (TNPO1) LDTP09949 7.78  LDD1822 
V-type proton ATPase 116 kDa subunit a 1 (ATP6V0A1) LDTP09968 15.67  LDD1822 
Voltage-dependent anion-selective channel protein 1 (VDAC1) LDTP03132 24.93  LDD1822 
Voltage-dependent anion-selective channel protein 2 (VDAC2) LDTP04071 19.03  LDD1822 
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⏷ Show the Full List of 52 Transporter and channel
41 Other Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Ankyrin repeat and LEM domain-containing protein 2 (ANKLE2) LDTP08364 11.08  LDD1822 
Apolipoprotein L2 (APOL2) LDTP11076 20.68  LDD1822 
Brain-specific angiogenesis inhibitor 1-associated protein 2 (BAIAP2) LDTP13755 11.00  LDD1822 
Charged multivesicular body protein 7 (CHMP7) LDTP09589 7.94  LDD1822 
Clustered mitochondria protein homolog (CLUH) LDTP14486 13.09  LDD1822 
Cytochrome c oxidase assembly factor 3 homolog, mitochondrial (COA3) LDTP13902 8.57  LDD1822 
Dyslexia-associated protein KIAA0319-like protein (KIAA0319L) LDTP08689 17.39  LDD1822 
EF-hand calcium-binding domain-containing protein 14 (EFCAB14) LDTP19021 9.51  LDD1822 
Endoplasmic reticulum-Golgi intermediate compartment protein 3 (ERGIC3) LDTP13828 15.67  LDD1822 
ER lumen protein-retaining receptor 2 (KDELR2) LDTP03678 56.49  LDD1822 
FERM, ARHGEF and pleckstrin domain-containing protein 2 (FARP2) LDTP01450 7.84  LDD1822 
Galectin-3-binding protein (LGALS3BP) LDTP05558 8.00  LDD1822 
Golgi integral membrane protein 4 (GOLIM4) LDTP00281 9.51  LDD1822 
HAUS augmin-like complex subunit 4 (HAUS4) LDTP11978 8.63  LDD1822 
Kinetochore-associated protein 1 (KNTC1) LDTP04382 9.19  LDD1822 
Large proline-rich protein BAG6 (BAG6) LDTP04094 10.63  LDD1822 
Mammalian ependymin-related protein 1 (EPDR1) LDTP13606 17.27  LDD1822 
Mdm2-binding protein (MTBP) LDTP15714 7.78  LDD1822 
Mitochondrial import receptor subunit TOM22 homolog (TOMM22) LDTP12565 21.26  LDD1822 
Mitochondrial import receptor subunit TOM5 homolog (TOMM5) LDTP15420 11.47  LDD1822 
Negative elongation factor C/D (NELFCD) LDTP08594 8.17  LDD1822 
Neuferricin (CYB5D2) LDTP15623 7.84  LDD1822 
Nucleobindin-1 (NUCB1) LDTP05375 15.89  LDD1822 
Nucleobindin-2 (NUCB2) LDTP05160 26.54  LDD1822 
Poly(U)-binding-splicing factor PUF60 (PUF60) LDTP13311 34.30  LDD1822 
PRELI domain containing protein 3B (PRELID3B) LDTP18569 9.45  LDD1822 
PRELI domain-containing protein 1, mitochondrial (PRELID1) LDTP13807 14.72  LDD1822 
Protein CEBPZOS (CEBPZOS) LDTP18883 10.20  LDD1822 
Protein CutA (CUTA) LDTP01075 14.83  LDD1822 
Protein FAM114A2 (FAM114A2) LDTP16080 8.94  LDD1822 
Protein FAM162A (FAM162A) LDTP10056 11.24  LDD1822 
Protein FAM3C (FAM3C) LDTP09773 8.88  LDD1822 
Protein unc-119 homolog B (UNC119B) LDTP00105 12.47  LDD1822 
Reticulocalbin-2 (RCN2) LDTP06097 8.57  LDD1822 
Synaptic vesicle glycoprotein 2A (SV2A) LDTP07934 8.82  LDD1822 
Tetraspanin-6 (TSPAN6) LDTP14458 10.85  LDD1822 
Tetratricopeptide repeat protein 38 (TTC38) LDTP19372 8.63  LDD1822 
U6 snRNA-associated Sm-like protein LSm5 (LSM5) LDTP14080 9.85  LDD1822 
Ubiquinol-cytochrome c reductase complex assembly factor 6 (UQCC6) LDTP15067 15.14  LDD1822 
UV excision repair protein RAD23 homolog A (RAD23A) LDTP04626 8.17  LDD1822 
Zinc finger CCHC domain-containing protein 3 (ZCCHC3) LDTP12623 8.94  LDD1822 
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⏷ Show the Full List of 41 Other

Full Information of The Labelling Profiles of This Probe

Quantification: AfBPP Probe vs Negative Probe
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
Probe:50uM; negative probe:50uM
Quantitative Method
TMT
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Peripheral blood
Disease Model
Normal
Model Name
Human normal cells (HEK-293T)
Note
Negative probe:C#CCCC1(CCC(NC)=O)N=N1
Interaction Atlas ID
 LDD1822 
Download The Altas

References

1 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587