General Information of Probe

Probe ID
LDPC0249
Probe Name
P3
Synonyms
2249695-94-9; EN300-26575790; (E)-4-(Dimethylamino)-N-(4-prop-2-ynoxyphenyl)but-2-enamide; 4-(dimethylamino)-N-[4-(prop-2-yn-1-yloxy)phenyl]but-2-enamide
Probe Type
ABPP Probe
Structure
3D MOL 2D MOL
Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 258.32
Lipid-water partition coefficient (xlogp) 1.5
Rotatable Bond Count (rotbonds) 6
Hydrogen Bond Donor Count (hbonddonor) 1
Hydrogen Bond Acceptor Count (hbondacc) 3
Chemical Identifiers
Formula
C15H18N2O2
IUPAC Name
(E)-4-(dimethylamino)-N-(4-prop-2-ynoxyphenyl)but-2-enamide
Canonical SMILES
CN(C)CC=CC(=O)NC1=CC=C(C=C1)OCC#C
InChI
InChI=1S/C15H18N2O2/c1-4-12-19-14-9-7-13(8-10-14)16-15(18)6-5-11-17(2)3/h1,5-10H,11-12H2,2-3H3,(H,16,18)/b6-5+
InChIKey
PIDAROUISLSFJF-AATRIKPKSA-N

The Probe Interaction Atlas

Target(s) List of this Probe

59 Enzyme Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
60 kDa heat shock protein, mitochondrial (HSPD1) LDTP02522 3.01  LDD0450 
Actin, cytoplasmic 1 (ACTB) LDTP04876 8.38  LDD0454 
Actin, cytoplasmic 2 (ACTG1) LDTP05059 1.50  LDD0450 
Adenosylhomocysteinase (AHCY) LDTP03242 2.45  LDD0450 
ATP-dependent RNA helicase A (DHX9) LDTP05550 10.00  LDD0450 
Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS) LDTP03159 10.00  LDD0450 
Calpain-2 catalytic subunit (CAPN2) LDTP02911 10.00  LDD0450 
Cardiomyopathy-associated protein 5 (CMYA5) LDTP08837 10.00  LDD0450 
Catalase (CAT) LDTP02001 7.19  LDD0450 
Cell division control protein 42 homolog (CDC42) LDTP04886 10.00  LDD0454 
Creatine kinase B-type (CKB) LDTP02616 3.21  LDD0454 
Cytochrome b5 type B (CYB5B) LDTP00697 10.00  LDD0450 
D-3-phosphoglycerate dehydrogenase (PHGDH) LDTP00701 10.00  LDD0450 
Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial (DUT) LDTP03669 2.49  LDD0450 
Dermcidin (DCD) LDTP05171 1.54  LDD0454 
E3 ubiquitin-protein ligase RNF180 (RNF180) LDTP08190 7.39  LDD0454 
EH domain-containing protein 3 (EHD3) LDTP12922 2.48  LDD0450 
Elongation factor 1-alpha 2 (EEF1A2) LDTP05460 3.21  LDD0454 
Elongation factor 2 (EEF2) LDTP02672 2.11  LDD0450 
Endoplasmic reticulum chaperone BiP (HSPA5) LDTP02534 10.00  LDD0454 
Epidermal growth factor receptor (EGFR) LDTP01785 8.57  LDD0450 
Eukaryotic initiation factor 4A-I (EIF4A1) LDTP04878 1.84  LDD0450 
Eukaryotic translation initiation factor 2 subunit 3 (EIF2S3) LDTP03915 3.42  LDD0450 
Fructose-bisphosphate aldolase A (ALDOA) LDTP02008 1.58  LDD0450 
GDP-L-fucose synthase (GFUS) LDTP05954 10.00  LDD0450 
Glucose-6-phosphate isomerase (GPI) LDTP02162 5.18  LDD0450 
Heat shock cognate 71 kDa protein (HSPA8) LDTP02541 3.58  LDD0450 
Heat shock protein HSP 90-alpha (HSP90AA1) LDTP02225 1.60  LDD0450 
L-lactate dehydrogenase A chain (LDHA) LDTP01766 1.99  LDD0454 
L-lactate dehydrogenase B chain (LDHB) LDTP02179 1.56  LDD0450 
Lysine--tRNA ligase (KARS1) LDTP06294 10.00  LDD0450 
Macrophage migration inhibitory factor (MIF) LDTP02713 10.00  LDD0450 
Malate dehydrogenase, mitochondrial (MDH2) LDTP03908 4.68  LDD0450 
Myosin-9 (MYH9) LDTP03764 1.94  LDD0450 
NEDD8-conjugating enzyme Ubc12 (UBE2M) LDTP04898 10.00  LDD0450 
Neutral alpha-glucosidase AB (GANAB) LDTP06192 2.04  LDD0450 
Nucleolar RNA helicase 2 (DDX21) LDTP12469 3.23  LDD0450 
Nucleoside diphosphate kinase A (NME1) LDTP02796 1.67  LDD0450 
Peptidyl-prolyl cis-trans isomerase B (PPIB) LDTP03216 10.00  LDD0450 
Peroxiredoxin-1 (PRDX1) LDTP05503 1.72  LDD0450 
Phosphoglycerate kinase 1 (PGK1) LDTP01787 2.14  LDD0450 
Phosphoglycerate mutase 2 (PGAM2) LDTP02774 1.54  LDD0454 
Probable ATP-dependent RNA helicase DDX46 (DDX46) LDTP07932 1.52  LDD0450 
Probable phospholipid-transporting ATPase IIA (ATP9A) LDTP01124 2.28  LDD0454 
Protein disulfide-isomerase (P4HB) LDTP02188 10.00  LDD0450 
Protein disulfide-isomerase A3 (PDIA3) LDTP03521 1.75  LDD0450 
Pyruvate kinase PKM (PKM) LDTP02733 1.66  LDD0454 
Ras GTPase-activating protein-binding protein 1 (G3BP1) LDTP05812 3.49  LDD0450 
Ras-related protein Rab-7a (RAB7A) LDTP04399 5.22  LDD0450 
Serine/threonine-protein kinase PRP4 homolog (PRPF4B) LDTP05911 1.63  LDD0454 
Thioredoxin (TXN) LDTP02502 10.00  LDD0450 
Transaldolase (TALDO1) LDTP03847 1.77  LDD0450 
Transitional endoplasmic reticulum ATPase (VCP) LDTP04665 10.00  LDD0450 
Transketolase (TKT) LDTP03487 1.70  LDD0450 
Triosephosphate isomerase (TPI1) LDTP04851 1.61  LDD0454 
Tubulin--tyrosine ligase-like protein 12 (TTLL12) LDTP06067 10.00  LDD0450 
Ubiquitin-like modifier-activating enzyme 1 (UBA1) LDTP03166 10.00  LDD0450 
UDP-glucose:glycoprotein glucosyltransferase 1 (UGGT1) LDTP12851 10.00  LDD0450 
Very-long-chain enoyl-CoA reductase (TECR) LDTP12867 3.42  LDD0450 
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⏷ Show the Full List of 59 Enzyme
27 Transporter and channel Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
14-3-3 protein theta (YWHAQ) LDTP03385 10.00  LDD0450 
14-3-3 protein zeta/delta (YWHAZ) LDTP05043 1.53  LDD0450 
ADP/ATP translocase 2 (SLC25A5) LDTP02087 1.77  LDD0450 
Amino acid transporter heavy chain SLC3A2 (SLC3A2) LDTP02256 1.56  LDD0450 
Annexin A1 (ANXA1) LDTP02010 5.39  LDD0450 
Annexin A2 (ANXA2) LDTP02199 4.35  LDD0450 
Annexin A5 (ANXA5) LDTP02307 10.00  LDD0450 
Astrotactin-1 (ASTN1) LDTP00362 10.00  LDD0454 
Chloride intracellular channel protein 1 (CLIC1) LDTP00244 7.91  LDD0454 
Clathrin heavy chain 1 (CLTC) LDTP05252 1.77  LDD0450 
Cystatin-B (CSTB) LDTP02009 10.00  LDD0450 
Desmoplakin (DSP) LDTP02815 7.72  LDD0454 
Fatty acid-binding protein 5 (FABP5) LDTP05292 10.00  LDD0450 
Filamin-A (FLNA) LDTP03107 1.88  LDD0450 
Filamin-B (FLNB) LDTP01197 4.31  LDD0450 
Importin subunit alpha-3 (KPNA4) LDTP00328 10.00  LDD0450 
Importin subunit beta-1 (KPNB1) LDTP06242 10.00  LDD0454 
Protein S100-A10 (S100A10) LDTP04885 3.34  LDD0450 
Protein SON (SON) LDTP02959 1.71  LDD0450 
RNA-binding protein with serine-rich domain 1 (RNPS1) LDTP06350 2.30  LDD0450 
Serine/arginine repetitive matrix protein 1 (SRRM1) LDTP08637 1.78  LDD0450 
Solute carrier family 25 member 44 (SLC25A44) LDTP15733 2.09  LDD0450 
T-complex protein 1 subunit delta (CCT4) LDTP04391 10.00  LDD0450 
Talin-1 (TLN1) LDTP14031 10.00  LDD0450 
Urea transporter 1 (SLC14A1) LDTP05832 10.00  LDD0454 
Voltage-dependent anion-selective channel protein 1 (VDAC1) LDTP03132 2.62  LDD0454 
Voltage-dependent anion-selective channel protein 2 (VDAC2) LDTP04071 10.00  LDD0450 
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⏷ Show the Full List of 27 Transporter and channel
2 Transcription factor Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Non-POU domain-containing octamer-binding protein (NONO) LDTP06341 5.80  LDD0450 
Zinc finger protein 99 (ZNF99) LDTP16710 10.00  LDD0454 
------------------------------------------------------------------------------------
1 GPCR Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Olfactory receptor 8H2 (OR8H2) LDTP17677 2.17  LDD0454 
------------------------------------------------------------------------------------
112 Other Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
14-3-3 protein beta/alpha (YWHAB) LDTP03617 3.13  LDD0450 
14-3-3 protein sigma (SFN) LDTP03618 10.00  LDD0450 
Alpha-actinin-1 (ACTN1) LDTP02631 10.00  LDD0450 
Alpha-actinin-4 (ACTN4) LDTP00843 1.64  LDD0450 
Arginine/serine-rich coiled-coil protein 2 (RSRC2) LDTP07954 5.18  LDD0450 
Bcl-2-associated transcription factor 1 (BCLAF1) LDTP12826 4.01  LDD0450 
Caprin-1 (CAPRIN1) LDTP06121 10.00  LDD0450 
Centriolin (CNTRL) LDTP08139 9.49  LDD0454 
Cilia- and flagella- associated protein 210 (CFAP210) LDTP19229 2.26  LDD0454 
Cofilin-1 (CFL1) LDTP03244 1.85  LDD0450 
Disheveled-associated activator of morphogenesis 1 (DAAM1) LDTP14045 1.68  LDD0454 
Elongation factor 1-delta (EEF1D) LDTP03499 10.00  LDD0450 
Elongation factor 1-gamma (EEF1G) LDTP03367 1.55  LDD0450 
Eukaryotic translation initiation factor 3 subunit D (EIF3D) LDTP00619 4.71  LDD0450 
Eukaryotic translation initiation factor 4 gamma 1 (EIF4G1) LDTP05421 10.00  LDD0450 
Eukaryotic translation initiation factor 4H (EIF4H) LDTP06301 2.82  LDD0450 
Eukaryotic translation initiation factor 6 (EIF6) LDTP04743 10.00  LDD0450 
Ezrin (EZR) LDTP02779 1.66  LDD0450 
Fascin (FSCN1) LDTP06598 1.55  LDD0450 
Galectin-1 (LGALS1) LDTP02341 2.43  LDD0454 
Heat shock 70 kDa protein 1B (HSPA1B) LDTP02435 10.00  LDD0450 
Heat shock 70 kDa protein 6 (HSPA6) LDTP02884 1.71  LDD0450 
Heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1) LDTP02364 1.94  LDD0450 
Heterogeneous nuclear ribonucleoprotein A3 (HNRNPA3) LDTP04495 10.00  LDD0450 
Heterogeneous nuclear ribonucleoprotein F (HNRNPF) LDTP04514 4.29  LDD0450 
Heterogeneous nuclear ribonucleoprotein H (HNRNPH1) LDTP03615 10.00  LDD0450 
Heterogeneous nuclear ribonucleoprotein K (HNRNPK) LDTP04952 1.86  LDD0450 
Heterogeneous nuclear ribonucleoprotein Q (SYNCRIP) LDTP00991 10.00  LDD0450 
Heterogeneous nuclear ribonucleoprotein R (HNRNPR) LDTP00756 10.00  LDD0454 
Heterogeneous nuclear ribonucleoprotein U (HNRNPU) LDTP05259 10.00  LDD0454 
Heterogeneous nuclear ribonucleoproteins A2/B1 (HNRNPA2B1) LDTP03182 1.90  LDD0450 
Heterogeneous nuclear ribonucleoproteins C1/C2 (HNRNPC) LDTP02227 3.62  LDD0450 
Histone H1.2 (H1-2) LDTP02845 2.08  LDD0450 
Histone H4 (H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9; H4C11; H4C12; H4C13; H4C14; H4C15; H4C16) LDTP05004 1.67  LDD0454 
Junction plakoglobin (JUP) LDTP02756 2.29  LDD0450 
Keratin, type I cytoskeletal 13 (KRT13) LDTP02675 10.00  LDD0450 
Keratin, type I cytoskeletal 14 (KRT14) LDTP01930 3.15  LDD0450 
Keratin, type I cytoskeletal 15 (KRT15) LDTP02974 10.00  LDD0450 
Keratin, type I cytoskeletal 17 (KRT17) LDTP05424 5.81  LDD0450 
Keratin, type II cytoskeletal 4 (KRT4) LDTP02975 10.00  LDD0450 
Keratin, type II cytoskeletal 8 (KRT8) LDTP02125 10.00  LDD0454 
KH domain-containing, RNA-binding, signal transduction-associated protein 1 (KHDRBS1) LDTP05525 10.00  LDD0450 
Laminin subunit beta-3 (LAMB3) LDTP05974 10.00  LDD0450 
Large ribosomal subunit protein eL14 (RPL14) LDTP04389 2.93  LDD0450 
Large ribosomal subunit protein eL15 (RPL15) LDTP04919 2.62  LDD0450 
Large ribosomal subunit protein eL18 (RPL18) LDTP05509 2.96  LDD0450 
Large ribosomal subunit protein eL19 (RPL19) LDTP05196 1.67  LDD0450 
Large ribosomal subunit protein eL29 (RPL29) LDTP04140 1.64  LDD0450 
Large ribosomal subunit protein eL30 (RPL30) LDTP05021 10.00  LDD0450 
Large ribosomal subunit protein eL31 (RPL31) LDTP05023 1.79  LDD0454 
Large ribosomal subunit protein eL34 (RPL34) LDTP04233 1.80  LDD0450 
Large ribosomal subunit protein eL6 (RPL6) LDTP05378 1.69  LDD0450 
Large ribosomal subunit protein eL8 (RPL7A) LDTP04990 1.68  LDD0450 
Large ribosomal subunit protein uL1 (RPL10A) LDTP05024 2.46  LDD0450 
Large ribosomal subunit protein uL10 (RPLP0) LDTP02109 10.00  LDD0450 
Large ribosomal subunit protein uL11 (RPL12) LDTP03517 2.33  LDD0450 
Large ribosomal subunit protein uL13 (RPL13A) LDTP03899 6.56  LDD0450 
Large ribosomal subunit protein uL16 (RPL10) LDTP03395 1.84  LDD0450 
Large ribosomal subunit protein uL18 (RPL5) LDTP04106 1.83  LDD0454 
Large ribosomal subunit protein uL2 (RPL8) LDTP05027 1.74  LDD0450 
Large ribosomal subunit protein uL22 (RPL17) LDTP02961 2.33  LDD0450 
Large ribosomal subunit protein uL23 (RPL23A) LDTP05001 4.04  LDD0450 
Large ribosomal subunit protein uL4 (RPL4) LDTP03815 1.51  LDD0450 
LIM and SH3 domain protein 1 (LASP1) LDTP06220 1.87  LDD0450 
Luc7-like protein 3 (LUC7L3) LDTP01534 5.68  LDD0454 
Matrin-3 (MATR3) LDTP04027 3.67  LDD0450 
Melanoma-associated antigen 4 (MAGEA4) LDTP04041 10.00  LDD0450 
Moesin (MSN) LDTP03346 10.00  LDD0454 
Myosin light polypeptide 6 (MYL6) LDTP04875 2.82  LDD0450 
Neuroblast differentiation-associated protein AHNAK (AHNAK) LDTP05597 2.59  LDD0450 
Nucleolin (NCL) LDTP02990 7.22  LDD0450 
Nucleosome assembly protein 1-like 1 (NAP1L1) LDTP04684 1.54  LDD0450 
PDZ and LIM domain protein 1 (PDLIM1) LDTP00193 10.00  LDD0450 
Perilipin-5 (PLIN5) LDTP05269 4.60  LDD0450 
Plasminogen activator inhibitor 2 (SERPINB2) LDTP02084 4.04  LDD0450 
Plastin-2 (LCP1) LDTP02691 10.00  LDD0450 
Poly(rC)-binding protein 1 (PCBP1) LDTP06366 10.00  LDD0450 
Polyadenylate-binding protein 1 (PABPC1) LDTP02595 10.00  LDD0450 
Polypyrimidine tract-binding protein 1 (PTBP1) LDTP03364 2.12  LDD0450 
Pre-mRNA-splicing factor 38B (PRPF38B) LDTP17266 10.00  LDD0450 
Prelamin-A/C (LMNA) LDTP01932 5.79  LDD0450 
Proteasome activator complex subunit 1 (PSME1) LDTP05484 10.00  LDD0450 
Protein S100-A11 (S100A11) LDTP03620 4.06  LDD0450 
Protein S100-A14 (S100A14) LDTP12277 10.00  LDD0450 
Protein S100-A2 (S100A2) LDTP03463 10.00  LDD0450 
Protein S100-P (S100P) LDTP03336 10.00  LDD0450 
Putative HLA class I histocompatibility antigen, alpha chain H (HLA-H) LDTP01914 10.00  LDD0450 
Rab GDP dissociation inhibitor beta (GDI2) LDTP04355 8.89  LDD0454 
Reticulon-3 (RTN3) LDTP01522 10.00  LDD0450 
Reticulon-4 (RTN4) LDTP12412 10.00  LDD0450 
Serine/arginine repetitive matrix protein 2 (SRRM2) LDTP13746 1.60  LDD0450 
Serine/arginine-rich splicing factor 6 (SRSF6) LDTP05802 1.94  LDD0450 
Serpin B11 (SERPINB11) LDTP10650 10.00  LDD0454 
Small nuclear ribonucleoprotein Sm D2 (SNRPD2) LDTP04982 2.00  LDD0450 
Small ribosomal subunit protein eS19 (RPS19) LDTP03864 10.00  LDD0450 
Small ribosomal subunit protein eS26 (RPS26) LDTP05014 10.00  LDD0450 
Small ribosomal subunit protein eS4, X isoform (RPS4X) LDTP04997 1.85  LDD0450 
Small ribosomal subunit protein eS8 (RPS8) LDTP04964 3.64  LDD0450 
Small ribosomal subunit protein uS11 (RPS14) LDTP04970 10.00  LDD0450 
Small ribosomal subunit protein uS15 (RPS13) LDTP04974 1.51  LDD0454 
Small ubiquitin-related modifier 3 (SUMO3) LDTP04717 1.82  LDD0450 
Splicing factor U2AF 26 kDa subunit (U2AF1L4) LDTP09562 1.76  LDD0454 
Src substrate cortactin (CTTN) LDTP06094 4.38  LDD0450 
Thyroid hormone receptor-associated protein 3 (THRAP3) LDTP13919 1.77  LDD0450 
Transgelin-2 (TAGLN2) LDTP03846 2.82  LDD0450 
Translationally-controlled tumor protein (TPT1) LDTP02683 10.00  LDD0450 
Tropomyosin alpha-3 chain (TPM3) LDTP02165 10.00  LDD0450 
Tubulin beta-4B chain (TUBB4B) LDTP05076 10.00  LDD0450 
Tubulin-specific chaperone A (TBCA) LDTP01184 10.00  LDD0450 
Tumor necrosis factor alpha-induced protein 8-like protein 2 (TNFAIP8L2) LDTP17377 10.00  LDD0450 
Ubiquitin-ribosomal protein eS31 fusion protein (RPS27A) LDTP05033 1.95  LDD0450 
Vimentin (VIM) LDTP02297 6.28  LDD0454 
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⏷ Show the Full List of 112 Other

Competitor(s) Related To This Probe

Competitor ID Name Concentration Cell-system Ref
 LDCM0166  Afatinib . Human skin squamous cell carcinoma cells (A431) [1]

Full Information of The Labelling Profiles of This Probe

Quantification: Probe vs DMSO
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
1 uM
Quantitative Method
LFQ
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Skin
Disease Model
Skin squamous cell carcinoma [ICD-11:2C31]
Model Name
Human skin squamous cell carcinoma cells (A431)
Interaction Atlas ID
  
Experiment 2 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
1 uM
Quantitative Method
LFQ
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Cervix uteri
Disease Model
Endocervical adenocarcinoma [ICD-11:2C77]
Model Name
Human endocervical adenocarcinoma cells (HeLa)
Interaction Atlas ID
Quantification: Probe vs (Probe+Competitor)
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Quantitative Method
SILAC
Competitor Name
Afatinib
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Skin
Disease Model
Skin squamous cell carcinoma [ICD-11:2C31]
Model Name
Human skin squamous cell carcinoma cells (A431)
Interaction Atlas ID

References

1 Comparison of Different Competitive Proteome Profiling Approaches in Target Identification of Covalent Inhibitors. Chembiochem. 2022 Dec 16;23(24):e202200389. doi: 10.1002/cbic.202200389. Epub 2022 Nov 22.