General Information of Target

Target ID LDTP02256
Target Name Amino acid transporter heavy chain SLC3A2 (SLC3A2)
Gene Name SLC3A2
Gene ID 6520
Synonyms
MDU1; Amino acid transporter heavy chain SLC3A2; 4F2 cell-surface antigen heavy chain; 4F2hc; 4F2 heavy chain antigen; Lymphocyte activation antigen 4F2 large subunit; Solute carrier family 3 member 2; CD antigen CD98
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MELQPPEASIAVVSIPRQLPGSHSEAGVQGLSAGDDSELGSHCVAQTGLELLASGDPLPS
ASQNAEMIETGSDCVTQAGLQLLASSDPPALASKNAEVTGTMSQDTEVDMKEVELNELEP
EKQPMNAASGAAMSLAGAEKNGLVKIKVAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVR
TRWALLLLFWLGWLGMLAGAVVIIVRAPRCRELPAQKWWHTGALYRIGDLQAFQGHGAGN
LAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKK
SIRVILDLTPNYRGENSWFSTQVDTVATKVKDALEFWLQAGVDGFQVRDIENLKDASSFL
AEWQNITKGFSEDRLLIAGTNSSDLQQILSLLESNKDLLLTSSYLSDSGSTGEHTKSLVT
QYLNATGNRWCSWSLSQARLLTSFLPAQLLRLYQLMLFTLPGTPVFSYGDEIGLDAAALP
GQPMEAPVMLWDESSFPDIPGAVSANMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHGD
FHAFSAGPGLFSYIRHWDQNERFLVVLNFGDVGLSAGLQASDLPASASLPAKADLLLSTQ
PGREEGSPLELERLKLEPHEGLLLRFPYAA
Target Type
Clinical trial
Target Bioclass
Transporter and channel
Family
SLC3A transporter family
Subcellular location
Apical cell membrane
Function
Acts as a chaperone that facilitates biogenesis and trafficking of functional transporters heterodimers to the plasma membrane. Forms heterodimer with SLC7 family transporters (SLC7A5, SLC7A6, SLC7A7, SLC7A8, SLC7A10 and SLC7A11), a group of amino-acid antiporters . Heterodimers function as amino acids exchangers, the specificity of the substrate depending on the SLC7A subunit. Heterodimers SLC3A2/SLC7A6 or SLC3A2/SLC7A7 mediate the uptake of dibasic amino acids. Heterodimer SLC3A2/SLC7A11 functions as an antiporter by mediating the exchange of extracellular anionic L-cystine and intracellular L-glutamate across the cellular plasma membrane. SLC3A2/SLC7A10 translocates small neutral L- and D-amino acids across the plasma membrane. SLC3A2/SLC75 or SLC3A2/SLC7A8 translocates neutral amino acids with broad specificity, thyroid hormones and L-DOPA. SLC3A2 is essential for plasma membrane localization, stability, and the transport activity of SLC7A5 and SLC7A8. When associated with LAPTM4B, the heterodimer SLC7A5 is recruited to lysosomes to promote leucine uptake into these organelles, and thereby mediates mTORC1 activation. Modulates integrin-related signaling and is essential for integrin-dependent cell spreading, migration and tumor progression.; (Microbial infection) In case of hepatitis C virus/HCV infection, the complex formed by SLC3A2 and SLC7A5/LAT1 plays a role in HCV propagation by facilitating viral entry into host cell and increasing L-leucine uptake-mediated mTORC1 signaling activation, thereby contributing to HCV-mediated pathogenesis.; (Microbial infection) Acts as a receptor for malaria parasite Plasmodium vivax (Thai isolate) in immature red blood cells.
TTD ID
T46263
Uniprot ID
P08195
DrugMap ID
TT5CZSM
Ensemble ID
ENST00000338663.12
HGNC ID
HGNC:11026

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 39 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info 
6.47  LDD0402  [1]
Alkylaryl probe 3
 Probe Info 
20.00  LDD0381  [2]
P1
 Probe Info 
1.53  LDD0452  [3]
P2
 Probe Info 
2.17  LDD0449  [3]
P3
 Probe Info 
1.56  LDD0450  [3]
P8
 Probe Info 
1.88  LDD0451  [3]
11RK72
 Probe Info 
5.23  LDD0327  [4]
11RK73
 Probe Info 
4.79  LDD0328  [4]
CHEMBL5175495
 Probe Info 
11.67  LDD0196  [5]
CY4
 Probe Info 
100.00  LDD0244  [6]
N1
 Probe Info 
100.00  LDD0242  [6]
W1
 Probe Info 
20.19  LDD0235  [7]
C-Sul
 Probe Info 
2.24  LDD0066  [8]
YN-4
 Probe Info 
100.00  LDD0445  [9]
ONAyne
 Probe Info 
K166(0.00); K615(0.00)  LDD0273  [10]
IPM
 Probe Info 
N.A.  LDD0241  [7]
OPA-S-S-alkyne
 Probe Info 
K257(1.64); K255(1.64); K615(3.54); K245(5.72)  LDD3494  [11]
Alkylaryl probe 2
 Probe Info 
3.00  LDD0390  [2]
DBIA
 Probe Info 
C462(2.57)  LDD3312  [12]
AZ-9
 Probe Info 
10.00  LDD2154  [13]
5E-2FA
 Probe Info 
H414(0.00); H236(0.00); H619(0.00); H542(0.00)  LDD2235  [14]
ATP probe
 Probe Info 
N.A.  LDD0199  [15]
4-Iodoacetamidophenylacetylene
 Probe Info 
N.A.  LDD0038  [16]
IA-alkyne
 Probe Info 
N.A.  LDD0036  [16]
Lodoacetamide azide
 Probe Info 
N.A.  LDD0037  [16]
ATP probe
 Probe Info 
N.A.  LDD0035  [17]
BTD
 Probe Info 
N.A.  LDD0004  [18]
Compound 10
 Probe Info 
N.A.  LDD2216  [19]
Compound 11
 Probe Info 
N.A.  LDD2213  [19]
NHS
 Probe Info 
K255(0.00); K166(0.00); K147(0.00); K160(0.00)  LDD0010  [18]
STPyne
 Probe Info 
K166(0.00); K160(0.00)  LDD0009  [18]
Ox-W18
 Probe Info 
N.A.  LDD2175  [20]
1c-yne
 Probe Info 
K160(0.00); K140(0.00)  LDD0228  [21]
1d-yne
 Probe Info 
K269(0.00); K615(0.00)  LDD0357  [21]
Acrolein
 Probe Info 
H414(0.00); H236(0.00); H556(0.00); H265(0.00)  LDD0217  [22]
Crotonaldehyde
 Probe Info 
H556(0.00); H236(0.00); H619(0.00); H265(0.00)  LDD0219  [22]
Methacrolein
 Probe Info 
H236(0.00); H556(0.00); H220(0.00); H619(0.00)  LDD0218  [22]
AOyne
 Probe Info 
5.10  LDD0443  [23]
NAIA_5
 Probe Info 
C210(0.00); C431(0.00)  LDD2223  [24]
PAL-AfBPP Probe
Click To Hide/Show 15 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
C055
 Probe Info 
19.29  LDD1752  [25]
C158
 Probe Info 
9.25  LDD1838  [25]
C160
 Probe Info 
20.97  LDD1840  [25]
C170
 Probe Info 
7.89  LDD1850  [25]
C193
 Probe Info 
7.06  LDD1869  [25]
C194
 Probe Info 
9.71  LDD1870  [25]
C198
 Probe Info 
10.78  LDD1874  [25]
C275
 Probe Info 
6.36  LDD1945  [25]
C284
 Probe Info 
38.59  LDD1954  [25]
C310
 Probe Info 
8.75  LDD1977  [25]
FFF probe11
 Probe Info 
5.95  LDD0471  [26]
FFF probe12
 Probe Info 
11.16  LDD0473  [26]
FFF probe3
 Probe Info 
5.23  LDD0464  [26]
FFF probe9
 Probe Info 
5.30  LDD0470  [26]
STS-2
 Probe Info 
3.77  LDD0139  [27]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0524  2-Cyano-N-(2-morpholin-4-yl-ethyl)-acetamide MDA-MB-231 C431(0.53)  LDD2117  [28]
 LDCM0151  AZ-11 HeLa 10.00  LDD2154  [13]
 LDCM0108  Chloroacetamide HeLa H220(0.00); H556(0.00); H236(0.00); H265(0.00)  LDD0222  [22]
 LDCM0625  F8 Ramos C431(0.65); C210(1.66)  LDD2187  [29]
 LDCM0572  Fragment10 Ramos C431(0.83)  LDD2189  [29]
 LDCM0573  Fragment11 Ramos C431(0.22); C210(13.80)  LDD2190  [29]
 LDCM0574  Fragment12 Ramos C431(0.62)  LDD2191  [29]
 LDCM0575  Fragment13 Ramos C431(1.19); C210(1.88)  LDD2192  [29]
 LDCM0576  Fragment14 Ramos C431(1.18); C210(2.72)  LDD2193  [29]
 LDCM0579  Fragment20 Ramos C431(0.68)  LDD2194  [29]
 LDCM0580  Fragment21 Ramos C431(0.81); C210(0.67)  LDD2195  [29]
 LDCM0582  Fragment23 Ramos C431(1.24); C210(1.52)  LDD2196  [29]
 LDCM0578  Fragment27 Ramos C431(1.02); C210(1.01)  LDD2197  [29]
 LDCM0586  Fragment28 Ramos C431(1.20); C210(0.59)  LDD2198  [29]
 LDCM0588  Fragment30 Ramos C431(0.76); C210(1.65)  LDD2199  [29]
 LDCM0589  Fragment31 Ramos C431(0.93); C210(1.03)  LDD2200  [29]
 LDCM0590  Fragment32 Ramos C431(0.56)  LDD2201  [29]
 LDCM0468  Fragment33 Ramos C431(0.65); C210(1.48)  LDD2202  [29]
 LDCM0596  Fragment38 Ramos C431(0.99); C210(1.77)  LDD2203  [29]
 LDCM0566  Fragment4 Ramos C431(1.07)  LDD2184  [29]
 LDCM0610  Fragment52 Ramos C431(0.64)  LDD2204  [29]
 LDCM0614  Fragment56 Ramos C431(0.77); C210(1.45)  LDD2205  [29]
 LDCM0569  Fragment7 Ramos C431(0.87)  LDD2186  [29]
 LDCM0571  Fragment9 Ramos C431(0.57)  LDD2188  [29]
 LDCM0107  IAA HeLa H414(0.00); H236(0.00); H619(0.00); H265(0.00)  LDD0221  [22]
 LDCM0022  KB02 HEK-293T C431(0.90)  LDD1492  [30]
 LDCM0023  KB03 HEK-293T C431(0.94)  LDD1497  [30]
 LDCM0024  KB05 HMCB C462(2.57)  LDD3312  [12]
 LDCM0109  NEM HeLa H236(0.00); H414(0.00); H619(0.00); H556(0.00)  LDD0223  [22]
 LDCM0516  Nucleophilic fragment 21a MDA-MB-231 C431(0.76)  LDD2109  [28]
 LDCM0530  Nucleophilic fragment 28a MDA-MB-231 C431(0.78)  LDD2123  [28]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C431(0.98)  LDD2125  [28]
 LDCM0534  Nucleophilic fragment 30a MDA-MB-231 C431(0.70)  LDD2127  [28]
 LDCM0543  Nucleophilic fragment 38 MDA-MB-231 C431(0.90)  LDD2136  [28]
 LDCM0544  Nucleophilic fragment 39 MDA-MB-231 C431(1.00)  LDD2137  [28]
 LDCM0552  Nucleophilic fragment 6a MDA-MB-231 C431(0.97)  LDD2146  [28]
 LDCM0099  Phenelzine HEK-293T 3.00  LDD0390  [2]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 2 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
S-adenosylmethionine synthase isoform type-2 (MAT2A) AdoMet synthase family P31153
3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase (EBP) EBP family Q15125
Transporter and channel
Click To Hide/Show 4 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Cystine/glutamate transporter (SLC7A11) L-type amino acid transporter (LAT) (TC 2.A.3.8) family Q9UPY5
Large neutral amino acids transporter small subunit 1 (SLC7A5) L-type amino acid transporter (LAT) (TC 2.A.3.8) family Q01650
Large neutral amino acids transporter small subunit 2 (SLC7A8) L-type amino acid transporter (LAT) (TC 2.A.3.8) family Q9UHI5
Wolframin (WFS1) . O76024
GPCR
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Prosaposin receptor GPR37 (GPR37) G-protein coupled receptor 1 family O15354
Other
Click To Hide/Show 3 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
DNA damage-inducible transcript 4 protein (DDIT4) DDIT4 family Q9NX09
Ligand-dependent nuclear receptor-interacting factor 1 (LRIF1) LRIF1 family Q5T3J3
Heat shock protein beta-1 (HSPB1) Small heat shock protein (HSP20) family P04792

The Drug(s) Related To This Target

Phase 1
Click To Hide/Show 1 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
Ign523 Antibody D0OQ5R

References

1 Quantitative and Site-Specific Chemoproteomic Profiling of Targets of Acrolein. Chem Res Toxicol. 2019 Mar 18;32(3):467-473. doi: 10.1021/acs.chemrestox.8b00343. Epub 2019 Jan 15.
2 Hydrazines as versatile chemical biology probes and drug-discovery tools for cofactor-dependent enzymes. bioRxiv, 2020-06.
3 Comparison of Different Competitive Proteome Profiling Approaches in Target Identification of Covalent Inhibitors. Chembiochem. 2022 Dec 16;23(24):e202200389. doi: 10.1002/cbic.202200389. Epub 2022 Nov 22.
4 Small-Molecule Activity-Based Probe for Monitoring Ubiquitin C-Terminal Hydrolase L1 (UCHL1) Activity in Live Cells and Zebrafish Embryos. J Am Chem Soc. 2020 Sep 30;142(39):16825-16841. doi: 10.1021/jacs.0c07726. Epub 2020 Sep 18.
Mass spectrometry data entry: PXD021557 , PXD015828
5 Charting the Chemical Space of Acrylamide-Based Inhibitors of zDHHC20. ACS Med Chem Lett. 2022 Sep 26;13(10):1648-1654. doi: 10.1021/acsmedchemlett.2c00336. eCollection 2022 Oct 13.
6 Cyclopropenone, Cyclopropeniminium Ion, and Cyclopropenethione as Novel Electrophilic Warheads for Potential Target Discovery of Triple-Negative Breast Cancer. J Med Chem. 2023 Feb 23;66(4):2851-2864. doi: 10.1021/acs.jmedchem.2c01889. Epub 2023 Feb 10.
7 Oxidant-Induced Bioconjugation for Protein Labeling in Live Cells. ACS Chem Biol. 2023 Jan 20;18(1):112-122. doi: 10.1021/acschembio.2c00740. Epub 2022 Dec 21.
8 Low-Toxicity Sulfonium-Based Probes for Cysteine-Specific Profiling in Live Cells. Anal Chem. 2022 Mar 15;94(10):4366-4372. doi: 10.1021/acs.analchem.1c05129. Epub 2022 Mar 4.
9 Ynamide Electrophile for the Profiling of Ligandable Carboxyl Residues in Live Cells and the Development of New Covalent Inhibitors. J Med Chem. 2022 Aug 11;65(15):10408-10418. doi: 10.1021/acs.jmedchem.2c00272. Epub 2022 Jul 26.
10 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
11 A chemical proteomics approach for global mapping of functional lysines on cell surface of living cell. Nat Commun. 2024 Apr 8;15(1):2997. doi: 10.1038/s41467-024-47033-w.
Mass spectrometry data entry: PXD042888
12 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
13 2H-Azirine-Based Reagents for Chemoselective Bioconjugation at Carboxyl Residues Inside Live Cells. J Am Chem Soc. 2020 Apr 1;142(13):6051-6059. doi: 10.1021/jacs.9b12116. Epub 2020 Mar 23.
14 Global profiling of functional histidines in live cells using small-molecule photosensitizer and chemical probe relay labelling. Nat Chem. 2024 Jun 4. doi: 10.1038/s41557-024-01545-6. Online ahead of print.
Mass spectrometry data entry: PXD042377
15 Targeted Proteomic Approaches for Proteome-Wide Characterizations of the AMP-Binding Capacities of Kinases. J Proteome Res. 2022 Aug 5;21(8):2063-2070. doi: 10.1021/acs.jproteome.2c00225. Epub 2022 Jul 12.
16 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
17 Comparison of Quantitative Mass Spectrometry Platforms for Monitoring Kinase ATP Probe Uptake in Lung Cancer. J Proteome Res. 2018 Jan 5;17(1):63-75. doi: 10.1021/acs.jproteome.7b00329. Epub 2017 Nov 22.
Mass spectrometry data entry: PXD006095 , PXD006096
18 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
19 Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling. Anal Chem. 2021 Feb 2;93(4):2610-2618. doi: 10.1021/acs.analchem.0c04726. Epub 2021 Jan 20.
Mass spectrometry data entry: PXD022279
20 Oxidative cyclization reagents reveal tryptophan cation- interactions. Nature. 2024 Mar;627(8004):680-687. doi: 10.1038/s41586-024-07140-6. Epub 2024 Mar 6.
Mass spectrometry data entry: PXD001377 , PXD005252
21 Tunable Amine-Reactive Electrophiles for Selective Profiling of Lysine. Angew Chem Int Ed Engl. 2022 Jan 26;61(5):e202112107. doi: 10.1002/anie.202112107. Epub 2021 Dec 16.
22 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
23 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
24 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
25 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587
26 Ligand and Target Discovery by Fragment-Based Screening in Human Cells. Cell. 2017 Jan 26;168(3):527-541.e29. doi: 10.1016/j.cell.2016.12.029. Epub 2017 Jan 19.
27 Design and synthesis of minimalist terminal alkyne-containing diazirine photo-crosslinkers and their incorporation into kinase inhibitors for cell- and tissue-based proteome profiling. Angew Chem Int Ed Engl. 2013 Aug 12;52(33):8551-6. doi: 10.1002/anie.201300683. Epub 2013 Jun 10.
28 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
29 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
30 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402