General Information of Probe

Probe ID
LDPC0053
Probe Name
FBP2
Probe Type
ABPP Probe
Structure
2D MOL
Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 215.296
Lipid-water partition coefficient (xlogp) 2.2934
Rotatable Bond Count (rotbonds) 5
Hydrogen Bond Donor Count (hbonddonor) 1
Hydrogen Bond Acceptor Count (hbondacc) 2
Chemical Identifiers
Formula
C14H17NO
Canonical SMILES
C#CCCCOc1ccc(C2CC2N)cc1
InChI
InChI=1S/C14H17NO/c1-2-3-4-9-16-12-7-5-11(6-8-12)13-10-14(13)15/h1,5-8,13-14H,3-4,9-10,15H2/t13?,14-/m0/s1
InChIKey
PVWDOGIKWILKGI-KZUDCZAMSA-N

The Probe Interaction Atlas

Target(s) List of this Probe

51 Enzyme Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Acid ceramidase (ASAH1) LDTP05905 2.63  LDD0317 
Adenosylhomocysteinase (AHCY) LDTP03242 2.04  LDD0323 
ADP-ribosylation factor-like protein 2 (ARL2) LDTP03805 2.79  LDD0323 
Aldehyde dehydrogenase family 3 member A2 (ALDH3A2) LDTP04437 2.01  LDD0317 
Aldehyde dehydrogenase X, mitochondrial (ALDH1B1) LDTP03560 2.76  LDD0320 
Aldehyde dehydrogenase, mitochondrial (ALDH2) LDTP02074 2.70  LDD0317 
Amine oxidase [flavin-containing] A (MAOA) LDTP03109 3.56  LDD0317 
Arsenite methyltransferase (AS3MT) LDTP12188 2.08  LDD0317 
Atlastin-3 (ATL3) LDTP07362 2.62  LDD0317 
Cathepsin B (CTSB) LDTP02223 2.14  LDD0323 
Cathepsin D (CTSD) LDTP02198 2.44  LDD0053 
CTD nuclear envelope phosphatase 1 (CTDNEP1) LDTP01616 3.14  LDD0317 
Cytochrome b-c1 complex subunit Rieske, mitochondrial (UQCRFS1) LDTP04144 2.74  LDD0323 
Cytochrome b5 type B (CYB5B) LDTP00697 19.34  LDD0317 
Deoxyribonuclease-2-alpha (DNASE2) LDTP00185 5.63  LDD0323 
Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial (DUT) LDTP03669 2.03  LDD0323 
Deubiquitinase OTUD6B (OTUD6B) LDTP08942 2.34  LDD0323 
Endothelin-converting enzyme 1 (ECE1) LDTP04008 2.47  LDD0323 
Eukaryotic elongation factor 2 kinase (EEF2K) LDTP00268 4.17  LDD0323 
Ferroptosis suppressor protein 1 (AIFM2) LDTP11124 2.80  LDD0323 
Glucosidase 2 subunit beta (PRKCSH) LDTP02718 2.60  LDD0323 
Glutathione S-transferase omega-1 (GSTO1) LDTP05128 2.99  LDD0317 
Heme oxygenase 2 (HMOX2) LDTP03540 42.55  LDD0317 
Inactive hydroxysteroid dehydrogenase-like protein 1 (HSDL1) LDTP06787 3.92  LDD0317 
Long-chain fatty acid transport protein 2 (SLC27A2) LDTP00496 2.20  LDD0323 
Long-chain fatty acid transport protein 3 (SLC27A3) LDTP07028 2.23  LDD0317 
Monoacylglycerol lipase ABHD6 (ABHD6) LDTP11261 9.06  LDD0317 
Neutral cholesterol ester hydrolase 1 (NCEH1) LDTP07591 2.03  LDD0323 
Patatin-like phospholipase domain-containing protein 4 (PNPLA4) LDTP03945 14.99  LDD0317 
Peptidyl-prolyl cis-trans isomerase FKBP3 (FKBP3) LDTP05255 2.09  LDD0323 
Peroxiredoxin-5, mitochondrial (PRDX5) LDTP03512 2.11  LDD0323 
Phosphatidylserine synthase 2 (PTDSS2) LDTP11284 3.15  LDD0317 
Probable glutathione peroxidase 8 (GPX8) LDTP09495 2.20  LDD0323 
Procathepsin L (CTSL) LDTP02217 6.87  LDD0317 
Prostaglandin E synthase 2 (PTGES2) LDTP12040 26.00  LDD0317 
Pyruvate dehydrogenase protein X component, mitochondrial (PDHX) LDTP00253 2.33  LDD0323 
Ras-related protein Rab-31 (RAB31) LDTP05957 2.05  LDD0323 
Retinaldehyde dehydrogenase 3 (ALDH1A3) LDTP04134 14.75  LDD0317 
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (ATP2A2) LDTP02860 2.62  LDD0317 
Serum paraoxonase/arylesterase 2 (PON2) LDTP06333 2.40  LDD0323 
Signal peptidase complex subunit 2 (SPCS2) LDTP06270 2.17  LDD0317 
Soluble calcium-activated nucleotidase 1 (CANT1) LDTP09620 3.95  LDD0317 
Sphingolipid delta(4)-desaturase DES1 (DEGS1) LDTP00544 5.55  LDD0317 
Sulfhydryl oxidase 2 (QSOX2) LDTP07813 2.31  LDD0323 
Superoxide dismutase [Cu-Zn] (SOD1) LDTP01776 5.36  LDD0323 
Telomerase RNA component interacting RNase (TRIR) LDTP11055 5.77  LDD0323 
Ubiquitin thioesterase otulin (OTULIN) LDTP10133 2.07  LDD0323 
Ubiquitin-conjugating enzyme E2 T (UBE2T) LDTP12348 3.78  LDD0323 
Ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1) LDTP05853 2.34  LDD0323 
Ubiquitin-conjugating enzyme E2 variant 2 (UBE2V2) LDTP06482 2.72  LDD0323 
Very-long-chain 3-oxoacyl-CoA reductase (HSD17B12) LDTP06901 2.14  LDD0317 
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⏷ Show the Full List of 51 Enzyme
34 Transporter and channel Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Annexin A5 (ANXA5) LDTP02307 3.82  LDD0323 
ATP synthase subunit d, mitochondrial (ATP5PD) LDTP14509 2.56  LDD0317 
ATP synthase subunit O, mitochondrial (ATP5PO) LDTP04150 2.03  LDD0323 
Bax inhibitor 1 (TMBIM6) LDTP04663 2.90  LDD0320 
Bone marrow stromal antigen 2 (BST2) LDTP05631 37.85  LDD0323 
Calnexin (CANX) LDTP03405 2.14  LDD0323 
Cation-dependent mannose-6-phosphate receptor (M6PR) LDTP03061 2.37  LDD0323 
Clathrin light chain A (CLTA) LDTP02352 2.35  LDD0323 
Complement component 1 Q subcomponent-binding protein, mitochondrial (C1QBP) LDTP05510 3.36  LDD0323 
Cytochrome c (CYCS) LDTP05231 3.00  LDD0323 
Cytoskeleton-associated protein 4 (CKAP4) LDTP05511 2.74  LDD0317 
Gasdermin-E (GSDME) LDTP00970 2.56  LDD0317 
Integrin beta-1 (ITGB1) LDTP02122 2.51  LDD0317 
Lysosome membrane protein 2 (SCARB2) LDTP06034 4.43  LDD0317 
Membrane-associated progesterone receptor component 1 (PGRMC1) LDTP00235 4.04  LDD0317 
Membrane-associated progesterone receptor component 2 (PGRMC2) LDTP00562 2.01  LDD0323 
Methylosome subunit pICln (CLNS1A) LDTP04597 3.71  LDD0323 
Mitochondrial carnitine/acylcarnitine carrier protein (SLC25A20) LDTP00865 6.24  LDD0317 
Neutral amino acid transporter B(0) (SLC1A5) LDTP06462 2.22  LDD0317 
NPC intracellular cholesterol transporter 1 (NPC1) LDTP00541 4.19  LDD0323 
Pannexin-1 (PANX1) LDTP10754 2.46  LDD0317 
PRA1 family protein 2 (PRAF2) LDTP01060 3.45  LDD0317 
Protein S100-A16 (S100A16) LDTP10313 2.45  LDD0323 
Reticulon-1 (RTN1) LDTP06633 4.52  LDD0317 
Scavenger receptor class B member 1 (SCARB1) LDTP09547 3.08  LDD0323 
Secretory carrier-associated membrane protein 1 (SCAMP1) LDTP00546 2.06  LDD0317 
Sorting nexin-1 (SNX1) LDTP05938 3.06  LDD0323 
Thioredoxin-related transmembrane protein 2 (TMX2) LDTP13943 2.20  LDD0317 
Transmembrane emp24 domain-containing protein 1 (TMED1) LDTP05875 3.53  LDD0317 
Transmembrane protein 126A (TMEM126A) LDTP15948 3.06  LDD0317 
Transport and Golgi organization protein 1 homolog (MIA3) LDTP07002 2.38  LDD0323 
Vesicle-associated membrane protein 3 (VAMP3) LDTP06490 4.37  LDD0317 
Voltage-dependent anion-selective channel protein 2 (VDAC2) LDTP04071 3.91  LDD0317 
Voltage-dependent anion-selective channel protein 3 (VDAC3) LDTP13824 2.17  LDD0317 
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⏷ Show the Full List of 34 Transporter and channel
4 Transcription factor Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
High mobility group protein B2 (HMGB2) LDTP03363 2.42  LDD0323 
Leucine zipper transcription factor-like protein 1 (LZTFL1) LDTP12394 3.33  LDD0323 
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 (SMARCE1) LDTP09996 2.14  LDD0323 
Zinc finger CCCH domain-containing protein 4 (ZC3H4) LDTP13718 2.05  LDD0323 
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4 Immunoglobulin Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Basigin (BSG) LDTP03772 5.11  LDD0323 
CD166 antigen (ALCAM) LDTP05973 2.30  LDD0053 
Cell surface glycoprotein MUC18 (MCAM) LDTP04020 2.10  LDD0323 
Neural cell adhesion molecule 1 (NCAM1) LDTP02666 2.30  LDD0317 
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69 Other Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
26S proteasome non-ATPase regulatory subunit 10 (PSMD10) LDTP01323 2.96  LDD0323 
A-kinase anchor protein 8 (AKAP8) LDTP00880 2.37  LDD0323 
A-kinase anchor protein 9 (AKAP9) LDTP11033 19.75  LDD0320 
Acidic leucine-rich nuclear phosphoprotein 32 family member A (ANP32A) LDTP03871 3.09  LDD0323 
Acidic leucine-rich nuclear phosphoprotein 32 family member B (ANP32B) LDTP09843 2.08  LDD0323 
Armadillo repeat-containing X-linked protein 2 (ARMCX2) LDTP17517 3.17  LDD0320 
Barrier-to-autointegration factor (BANF1) LDTP01250 6.97  LDD0317 
Bcl-2-associated transcription factor 1 (BCLAF1) LDTP12826 2.12  LDD0323 
Biorientation of chromosomes in cell division protein 1-like 1 (BOD1L1) LDTP09196 2.78  LDD0320 
Cadherin-2 (CDH2) LDTP02977 2.59  LDD0317 
Calmodulin-3 (CALM3) LDTP02443 12.28  LDD0317 
CDGSH iron-sulfur domain-containing protein 2 (CISD2) LDTP08902 2.92  LDD0317 
Charged multivesicular body protein 1b (CHMP1B) LDTP07984 6.41  LDD0323 
Charged multivesicular body protein 7 (CHMP7) LDTP09589 2.53  LDD0323 
Clusterin (CLU) LDTP02526 2.70  LDD0323 
Coiled-coil domain-containing protein 6 (CCDC6) LDTP06515 2.07  LDD0323 
DNA replication complex GINS protein PSF2 (GINS2) LDTP13802 3.36  LDD0323 
DNA replication complex GINS protein PSF3 (GINS3) LDTP11139 2.94  LDD0323 
Drebrin (DBN1) LDTP06588 2.13  LDD0323 
Dynactin subunit 2 (DCTN2) LDTP05922 4.79  LDD0323 
EKC/KEOPS complex subunit GON7 (GON7) LDTP11418 3.57  LDD0323 
Emerin (EMD) LDTP04356 2.22  LDD0323 
Endoplasmin (HSP90B1) LDTP02734 2.17  LDD0323 
Eukaryotic translation initiation factor 4B (EIF4B) LDTP03247 3.46  LDD0323 
Eukaryotic translation initiation factor 4H (EIF4H) LDTP06301 2.05  LDD0323 
Glycine cleavage system H protein, mitochondrial (GCSH) LDTP03227 3.03  LDD0323 
Golgi reassembly-stacking protein 2 (GORASP2) LDTP12073 2.43  LDD0323 
GrpE protein homolog 1, mitochondrial (GRPEL1) LDTP12144 2.03  LDD0323 
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (GNG2) LDTP14747 3.70  LDD0317 
Histone-binding protein RBBP4 (RBBP4) LDTP05590 2.07  LDD0323 
Inhibitor of nuclear factor kappa-B kinase-interacting protein (IKBIP) LDTP07891 5.73  LDD0317 
LRP chaperone MESD (MESD) LDTP06191 3.49  LDD0323 
Lupus La protein (SSB) LDTP02116 3.33  LDD0323 
MICOS complex subunit MIC19 (CHCHD3) LDTP12764 2.67  LDD0323 
Microtubule-associated protein RP/EB family member 1 (MAPRE1) LDTP06444 2.14  LDD0323 
Mitochondrial antiviral-signaling protein (MAVS) LDTP08058 3.13  LDD0323 
Mitochondrial import receptor subunit TOM20 homolog (TOMM20) LDTP06373 2.56  LDD0317 
Mitochondrial intermembrane space import and assembly protein 40 (CHCHD4) LDTP08874 3.26  LDD0323 
Myosin regulatory light chain 12A (MYL12A) LDTP02982 2.79  LDD0323 
Myristoylated alanine-rich C-kinase substrate (MARCKS) LDTP03503 2.45  LDD0317 
Nuclear autoantigenic sperm protein (NASP) LDTP04241 2.59  LDD0323 
Nucleolar and spindle-associated protein 1 (NUSAP1) LDTP11408 2.34  LDD0323 
OCIA domain-containing protein 1 (OCIAD1) LDTP12755 3.81  LDD0317 
ORM1-like protein 1 (ORMDL1) LDTP12978 3.62  LDD0320 
Perilipin-3 (PLIN3) LDTP01021 2.15  LDD0317 
Peroxiredoxin-like 2A (PRXL2A) LDTP11140 3.84  LDD0317 
Polyglutamine-binding protein 1 (PQBP1) LDTP01057 8.81  LDD0323 
Prohibitin-2 (PHB2) LDTP10924 3.45  LDD0317 
Proteasome activator complex subunit 1 (PSME1) LDTP05484 2.63  LDD0323 
Protein FAM234A (FAM234A) LDTP15958 2.83  LDD0323 
Protein LSM14 homolog B (LSM14B) LDTP11350 3.46  LDD0323 
Protein SET (SET) LDTP05277 3.54  LDD0323 
Ran-specific GTPase-activating protein (RANBP1) LDTP04049 2.12  LDD0323 
Replication termination factor 2 (RTF2) LDTP11434 3.35  LDD0323 
Reticulon-3 (RTN3) LDTP01522 6.08  LDD0317 
Reticulon-4 (RTN4) LDTP12412 5.99  LDD0317 
RUS family member 1 (RUSF1) LDTP10357 10.87  LDD0317 
SH3 domain-binding glutamic acid-rich-like protein 3 (SH3BGRL3) LDTP11804 4.25  LDD0323 
Small ribosomal subunit protein mS23 (MRPS23) LDTP13985 3.54  LDD0053 
Spliceosome-associated protein CWC15 homolog (CWC15) LDTP12951 3.18  LDD0323 
Stathmin-2 (STMN2) LDTP09967 4.02  LDD0317 
Syntaxin-12 (STX12) LDTP08389 2.18  LDD0317 
Transforming acidic coiled-coil-containing protein 3 (TACC3) LDTP14228 2.86  LDD0323 
Tropomyosin alpha-4 chain (TPM4) LDTP05068 2.03  LDD0323 
Tumor protein D54 (TPD52L2) LDTP00759 4.22  LDD0317 
Ubiquitin-like protein 4A (UBL4A) LDTP02570 3.06  LDD0323 
Ubiquitin-like protein ISG15 (ISG15) LDTP02092 2.23  LDD0323 
Vimentin (VIM) LDTP02297 2.09  LDD0323 
Zinc finger CCCH domain-containing protein 11A (ZC3H11A) LDTP01143 2.19  LDD0323 
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⏷ Show the Full List of 69 Other

Competitor(s) Related To This Probe

Competitor ID Name Concentration Cell-system Ref
 LDCM0008  Tranylcypromine 1 mM Human neuroblastoma cells (SH-SY5Y) [1]

Full Information of The Labelling Profiles of This Probe

Quantification: Probe vs DMSO
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
100 uM
Quantitative Method
LFQ
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Adrenal
Disease Model
Bone marrow neuroblastoma [ICD11: 2A00]
Model Name
Human neuroblastoma cells (SH-SY5Y)
Interaction Atlas ID
  
Experiment 2 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
100 uM
Quantitative Method
LFQ
In Vitro Experiment Model
Model Type
Cell lysate
Derived Tissue
Cervix uteri
Disease Model
Endocervical adenocarcinoma [ICD-11:2C77]
Model Name
Human endocervical adenocarcinoma cell lysate (HeLa)
Interaction Atlas ID
Quantification: Probe vs (Probe+Competitor)
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
100 uM
Quantitative Method
LFQ
Competitor Name
Tranylcypromine
Competitor Concentration
1 mM
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Adrenal
Disease Model
Bone marrow neuroblastoma [ICD11: 2A00]
Model Name
Human neuroblastoma cells (SH-SY5Y)
Interaction Atlas ID
  
Experiment 2 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
100 uM
Quantitative Method
LFQ
Competitor Name
Tranylcypromine
Competitor Concentration
1 mM
In Vitro Experiment Model
Model Type
Cell lysate
Derived Tissue
Cervix uteri
Disease Model
Endocervical adenocarcinoma [ICD-11:2C77]
Model Name
Human endocervical adenocarcinoma cell lysate (HeLa)
Interaction Atlas ID

References

1 Tranylcypromine specificity for monoamine oxidase is limited by promiscuous protein labelling and lysosomal trapping. RSC Chem Biol. 2020 Aug 12;1(4):209-213. doi: 10.1039/d0cb00048e. eCollection 2020 Oct 1.
Mass spectrometry data entry: PXD018580