General Information of Target

Target ID LDTP05938
Target Name Sorting nexin-1 (SNX1)
Gene Name SNX1
Gene ID 6642
Synonyms
Sorting nexin-1
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MASGGGGCSASERLPPPFPGLEPESEGAAGGSEPEAGDSDTEGEDIFTGAAVVSKHQSPK
ITTSLLPINNGSKENGIHEEQDQEPQDLFADATVELSLDSTQNNQKKVLAKTLISLPPQE
ATNSSKPQPTYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQ
FAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRA
ALERYLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTI
KMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDN
TALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRW
QDAQATLQKKREAEARLLWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVIR
FEKEKSKDFKNHVIKYLETLLYSQQQLAKYWEAFLPEAKAIS
Target Bioclass
Transporter and channel
Family
Sorting nexin family
Subcellular location
Endosome membrane
Function
Involved in several stages of intracellular trafficking. Interacts with membranes containing phosphatidylinositol 3-phosphate (PtdIns(3P)) or phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Acts in part as component of the retromer membrane-deforming SNX-BAR subcomplex. The SNX-BAR retromer mediates retrograde transport of cargo proteins from endosomes to the trans-Golgi network (TGN) and is involved in endosome-to-plasma membrane transport for cargo protein recycling. The SNX-BAR subcomplex functions to deform the donor membrane into a tubular profile called endosome-to-TGN transport carrier (ETC) (Probable). Can sense membrane curvature and has in vitro vesicle-to-membrane remodeling activity. Involved in retrograde endosome-to-TGN transport of lysosomal enzyme receptors (IGF2R, M6PR and SORT1) and Shiginella dysenteria toxin stxB. Plays a role in targeting ligand-activated EGFR to the lysosomes for degradation after endocytosis from the cell surface and release from the Golgi . Involvement in retromer-independent endocytic trafficking of P2RY1 and lysosomal degradation of protease-activated receptor-1/F2R. Promotes KALRN- and RHOG-dependent but retromer-independent membrane remodeling such as lamellipodium formation; the function is dependent on GEF activity of KALRN. Required for endocytosis of DRD5 upon agonist stimulation but not for basal receptor trafficking.
Uniprot ID
Q13596
Ensemble ID
ENST00000261889.9
HGNC ID
HGNC:11172

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
HT115 SNV: p.R322H .
IM95 SNV: p.I479M .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 30 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info 
15.00  LDD0402  [1]
AZ-9
 Probe Info 
10.00  LDD0393  [2]
TH211
 Probe Info 
Y463(18.11)  LDD0260  [3]
FBP2
 Probe Info 
3.06  LDD0323  [4]
STPyne
 Probe Info 
K214(3.60); K221(1.61); K223(10.00); K237(2.36)  LDD0277  [5]
Probe 1
 Probe Info 
Y165(11.63); Y463(235.02)  LDD3495  [6]
DBIA
 Probe Info 
C318(2.02)  LDD3312  [7]
JZ128-DTB
 Probe Info 
N.A.  LDD0462  [8]
DA-P3
 Probe Info 
10.42  LDD0181  [9]
5E-2FA
 Probe Info 
N.A.  LDD2235  [10]
ATP probe
 Probe Info 
K290(0.00); K442(0.00); K445(0.00); K450(0.00)  LDD0199  [11]
4-Iodoacetamidophenylacetylene
 Probe Info 
N.A.  LDD0038  [12]
IA-alkyne
 Probe Info 
N.A.  LDD0036  [12]
Lodoacetamide azide
 Probe Info 
N.A.  LDD0037  [12]
IPM
 Probe Info 
N.A.  LDD0025  [13]
JW-RF-010
 Probe Info 
N.A.  LDD0026  [13]
NAIA_4
 Probe Info 
N.A.  LDD2226  [14]
WYneN
 Probe Info 
N.A.  LDD0021  [15]
WYneO
 Probe Info 
N.A.  LDD0022  [15]
ENE
 Probe Info 
C8(0.00); C318(0.00)  LDD0006  [15]
SF
 Probe Info 
N.A.  LDD0028  [16]
TFBX
 Probe Info 
N.A.  LDD0148  [13]
VSF
 Probe Info 
N.A.  LDD0007  [15]
Phosphinate-6
 Probe Info 
N.A.  LDD0018  [17]
Ox-W18
 Probe Info 
N.A.  LDD2175  [18]
Acrolein
 Probe Info 
N.A.  LDD0217  [19]
Methacrolein
 Probe Info 
N.A.  LDD0218  [19]
W1
 Probe Info 
N.A.  LDD0236  [20]
AOyne
 Probe Info 
11.20  LDD0443  [21]
NAIA_5
 Probe Info 
C318(0.00); C8(0.00)  LDD2223  [14]
PAL-AfBPP Probe
Click To Hide/Show 5 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
FFF probe11
 Probe Info 
7.17  LDD0472  [22]
FFF probe2
 Probe Info 
12.75  LDD0463  [22]
FFF probe3
 Probe Info 
20.00  LDD0464  [22]
FFF probe9
 Probe Info 
5.47  LDD0470  [22]
VE-P
 Probe Info 
N.A.  LDD0396  [23]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0214  AC1 HEK-293T C318(0.90)  LDD1507  [24]
 LDCM0215  AC10 HEK-293T C318(1.23)  LDD1508  [24]
 LDCM0226  AC11 HEK-293T C318(0.92)  LDD1509  [24]
 LDCM0237  AC12 HEK-293T C318(0.92)  LDD1510  [24]
 LDCM0259  AC14 HEK-293T C318(1.36)  LDD1512  [24]
 LDCM0270  AC15 HEK-293T C318(0.85)  LDD1513  [24]
 LDCM0276  AC17 HEK-293T C318(0.92)  LDD1515  [24]
 LDCM0277  AC18 HEK-293T C318(1.13)  LDD1516  [24]
 LDCM0278  AC19 HEK-293T C318(0.81)  LDD1517  [24]
 LDCM0279  AC2 HEK-293T C318(1.26)  LDD1518  [24]
 LDCM0280  AC20 HEK-293T C318(1.04)  LDD1519  [24]
 LDCM0281  AC21 HEK-293T C318(1.03)  LDD1520  [24]
 LDCM0282  AC22 HEK-293T C318(1.17)  LDD1521  [24]
 LDCM0283  AC23 HEK-293T C318(1.08)  LDD1522  [24]
 LDCM0284  AC24 HEK-293T C318(1.07)  LDD1523  [24]
 LDCM0285  AC25 HEK-293T C318(0.93)  LDD1524  [24]
 LDCM0286  AC26 HEK-293T C318(1.30)  LDD1525  [24]
 LDCM0287  AC27 HEK-293T C318(1.04)  LDD1526  [24]
 LDCM0288  AC28 HEK-293T C318(0.99)  LDD1527  [24]
 LDCM0289  AC29 HEK-293T C318(1.06)  LDD1528  [24]
 LDCM0290  AC3 HEK-293T C318(0.98)  LDD1529  [24]
 LDCM0291  AC30 HEK-293T C318(1.10)  LDD1530  [24]
 LDCM0292  AC31 HEK-293T C318(1.08)  LDD1531  [24]
 LDCM0293  AC32 HEK-293T C318(1.09)  LDD1532  [24]
 LDCM0294  AC33 HEK-293T C318(0.90)  LDD1533  [24]
 LDCM0295  AC34 HEK-293T C318(0.97)  LDD1534  [24]
 LDCM0296  AC35 HEK-293T C318(0.92)  LDD1535  [24]
 LDCM0297  AC36 HEK-293T C318(0.94)  LDD1536  [24]
 LDCM0298  AC37 HEK-293T C318(1.06)  LDD1537  [24]
 LDCM0299  AC38 HEK-293T C318(0.98)  LDD1538  [24]
 LDCM0300  AC39 HEK-293T C318(0.84)  LDD1539  [24]
 LDCM0301  AC4 HEK-293T C318(0.97)  LDD1540  [24]
 LDCM0302  AC40 HEK-293T C318(1.03)  LDD1541  [24]
 LDCM0303  AC41 HEK-293T C318(0.94)  LDD1542  [24]
 LDCM0304  AC42 HEK-293T C318(0.96)  LDD1543  [24]
 LDCM0305  AC43 HEK-293T C318(0.89)  LDD1544  [24]
 LDCM0306  AC44 HEK-293T C318(0.96)  LDD1545  [24]
 LDCM0307  AC45 HEK-293T C318(0.93)  LDD1546  [24]
 LDCM0308  AC46 HEK-293T C318(1.02)  LDD1547  [24]
 LDCM0309  AC47 HEK-293T C318(1.15)  LDD1548  [24]
 LDCM0310  AC48 HEK-293T C318(1.05)  LDD1549  [24]
 LDCM0311  AC49 HEK-293T C318(0.88)  LDD1550  [24]
 LDCM0312  AC5 HEK-293T C318(1.03)  LDD1551  [24]
 LDCM0313  AC50 HEK-293T C318(1.01)  LDD1552  [24]
 LDCM0314  AC51 HEK-293T C318(1.04)  LDD1553  [24]
 LDCM0315  AC52 HEK-293T C318(0.99)  LDD1554  [24]
 LDCM0316  AC53 HEK-293T C318(0.95)  LDD1555  [24]
 LDCM0317  AC54 HEK-293T C318(0.86)  LDD1556  [24]
 LDCM0318  AC55 HEK-293T C318(0.93)  LDD1557  [24]
 LDCM0319  AC56 HEK-293T C318(1.08)  LDD1558  [24]
 LDCM0320  AC57 HEK-293T C318(0.90)  LDD1559  [24]
 LDCM0321  AC58 HEK-293T C318(1.20)  LDD1560  [24]
 LDCM0322  AC59 HEK-293T C318(0.98)  LDD1561  [24]
 LDCM0323  AC6 HEK-293T C318(1.48)  LDD1562  [24]
 LDCM0324  AC60 HEK-293T C318(0.93)  LDD1563  [24]
 LDCM0325  AC61 HEK-293T C318(1.01)  LDD1564  [24]
 LDCM0326  AC62 HEK-293T C318(1.06)  LDD1565  [24]
 LDCM0327  AC63 HEK-293T C318(0.88)  LDD1566  [24]
 LDCM0328  AC64 HEK-293T C318(1.00)  LDD1567  [24]
 LDCM0334  AC7 HEK-293T C318(0.96)  LDD1568  [24]
 LDCM0345  AC8 HEK-293T C318(1.03)  LDD1569  [24]
 LDCM0248  AKOS034007472 HEK-293T C318(0.87)  LDD1511  [24]
 LDCM0356  AKOS034007680 HEK-293T C318(0.94)  LDD1570  [24]
 LDCM0275  AKOS034007705 HEK-293T C318(0.98)  LDD1514  [24]
 LDCM0156  Aniline NCI-H1299 13.52  LDD0403  [1]
 LDCM0108  Chloroacetamide HeLa N.A.  LDD0222  [19]
 LDCM0632  CL-Sc Hep-G2 C8(0.74)  LDD2227  [14]
 LDCM0367  CL1 HEK-293T C318(0.81)  LDD1571  [24]
 LDCM0368  CL10 HEK-293T C318(0.85)  LDD1572  [24]
 LDCM0369  CL100 HEK-293T C318(0.86)  LDD1573  [24]
 LDCM0370  CL101 HEK-293T C318(0.83)  LDD1574  [24]
 LDCM0371  CL102 HEK-293T C318(0.97)  LDD1575  [24]
 LDCM0372  CL103 HEK-293T C318(0.80)  LDD1576  [24]
 LDCM0373  CL104 HEK-293T C318(0.91)  LDD1577  [24]
 LDCM0374  CL105 HEK-293T C318(0.82)  LDD1578  [24]
 LDCM0375  CL106 HEK-293T C318(0.87)  LDD1579  [24]
 LDCM0376  CL107 HEK-293T C318(0.94)  LDD1580  [24]
 LDCM0377  CL108 HEK-293T C318(0.93)  LDD1581  [24]
 LDCM0378  CL109 HEK-293T C318(0.85)  LDD1582  [24]
 LDCM0379  CL11 HEK-293T C318(0.80)  LDD1583  [24]
 LDCM0380  CL110 HEK-293T C318(0.88)  LDD1584  [24]
 LDCM0381  CL111 HEK-293T C318(1.07)  LDD1585  [24]
 LDCM0382  CL112 HEK-293T C318(0.93)  LDD1586  [24]
 LDCM0383  CL113 HEK-293T C318(0.92)  LDD1587  [24]
 LDCM0384  CL114 HEK-293T C318(0.97)  LDD1588  [24]
 LDCM0385  CL115 HEK-293T C318(0.93)  LDD1589  [24]
 LDCM0386  CL116 HEK-293T C318(1.08)  LDD1590  [24]
 LDCM0387  CL117 HEK-293T C318(0.79)  LDD1591  [24]
 LDCM0388  CL118 HEK-293T C318(0.93)  LDD1592  [24]
 LDCM0389  CL119 HEK-293T C318(0.80)  LDD1593  [24]
 LDCM0390  CL12 HEK-293T C318(0.95)  LDD1594  [24]
 LDCM0391  CL120 HEK-293T C318(0.93)  LDD1595  [24]
 LDCM0392  CL121 HEK-293T C318(0.84)  LDD1596  [24]
 LDCM0393  CL122 HEK-293T C318(0.89)  LDD1597  [24]
 LDCM0394  CL123 HEK-293T C318(0.83)  LDD1598  [24]
 LDCM0395  CL124 HEK-293T C318(0.87)  LDD1599  [24]
 LDCM0396  CL125 HEK-293T C318(0.82)  LDD1600  [24]
 LDCM0397  CL126 HEK-293T C318(1.00)  LDD1601  [24]
 LDCM0398  CL127 HEK-293T C318(0.87)  LDD1602  [24]
 LDCM0399  CL128 HEK-293T C318(0.94)  LDD1603  [24]
 LDCM0400  CL13 HEK-293T C318(0.70)  LDD1604  [24]
 LDCM0401  CL14 HEK-293T C318(0.90)  LDD1605  [24]
 LDCM0402  CL15 HEK-293T C318(0.79)  LDD1606  [24]
 LDCM0403  CL16 HEK-293T C318(1.02)  LDD1607  [24]
 LDCM0404  CL17 HEK-293T C318(0.75)  LDD1608  [24]
 LDCM0405  CL18 HEK-293T C318(1.45)  LDD1609  [24]
 LDCM0406  CL19 HEK-293T C318(0.96)  LDD1610  [24]
 LDCM0407  CL2 HEK-293T C318(0.89)  LDD1611  [24]
 LDCM0408  CL20 HEK-293T C318(0.99)  LDD1612  [24]
 LDCM0409  CL21 HEK-293T C318(1.00)  LDD1613  [24]
 LDCM0410  CL22 HEK-293T C318(1.11)  LDD1614  [24]
 LDCM0411  CL23 HEK-293T C318(1.18)  LDD1615  [24]
 LDCM0412  CL24 HEK-293T C318(1.04)  LDD1616  [24]
 LDCM0413  CL25 HEK-293T C318(0.72)  LDD1617  [24]
 LDCM0414  CL26 HEK-293T C318(0.92)  LDD1618  [24]
 LDCM0415  CL27 HEK-293T C318(0.95)  LDD1619  [24]
 LDCM0416  CL28 HEK-293T C318(1.01)  LDD1620  [24]
 LDCM0417  CL29 HEK-293T C318(0.96)  LDD1621  [24]
 LDCM0418  CL3 HEK-293T C318(0.91)  LDD1622  [24]
 LDCM0419  CL30 HEK-293T C318(1.17)  LDD1623  [24]
 LDCM0420  CL31 HEK-293T C318(0.95)  LDD1624  [24]
 LDCM0421  CL32 HEK-293T C318(1.05)  LDD1625  [24]
 LDCM0422  CL33 HEK-293T C318(0.99)  LDD1626  [24]
 LDCM0423  CL34 HEK-293T C318(1.17)  LDD1627  [24]
 LDCM0424  CL35 HEK-293T C318(1.30)  LDD1628  [24]
 LDCM0425  CL36 HEK-293T C318(1.05)  LDD1629  [24]
 LDCM0426  CL37 HEK-293T C318(0.82)  LDD1630  [24]
 LDCM0428  CL39 HEK-293T C318(0.89)  LDD1632  [24]
 LDCM0429  CL4 HEK-293T C318(0.96)  LDD1633  [24]
 LDCM0430  CL40 HEK-293T C318(1.15)  LDD1634  [24]
 LDCM0431  CL41 HEK-293T C318(0.86)  LDD1635  [24]
 LDCM0432  CL42 HEK-293T C318(1.03)  LDD1636  [24]
 LDCM0433  CL43 HEK-293T C318(1.03)  LDD1637  [24]
 LDCM0434  CL44 HEK-293T C318(1.03)  LDD1638  [24]
 LDCM0435  CL45 HEK-293T C318(1.11)  LDD1639  [24]
 LDCM0436  CL46 HEK-293T C318(1.04)  LDD1640  [24]
 LDCM0437  CL47 HEK-293T C318(1.30)  LDD1641  [24]
 LDCM0438  CL48 HEK-293T C318(1.08)  LDD1642  [24]
 LDCM0439  CL49 HEK-293T C318(0.94)  LDD1643  [24]
 LDCM0440  CL5 HEK-293T C318(0.93)  LDD1644  [24]
 LDCM0441  CL50 HEK-293T C318(0.88)  LDD1645  [24]
 LDCM0443  CL52 HEK-293T C318(1.13)  LDD1646  [24]
 LDCM0444  CL53 HEK-293T C318(0.76)  LDD1647  [24]
 LDCM0445  CL54 HEK-293T C318(1.35)  LDD1648  [24]
 LDCM0446  CL55 HEK-293T C318(0.94)  LDD1649  [24]
 LDCM0447  CL56 HEK-293T C318(0.91)  LDD1650  [24]
 LDCM0448  CL57 HEK-293T C318(0.97)  LDD1651  [24]
 LDCM0449  CL58 HEK-293T C318(1.29)  LDD1652  [24]
 LDCM0450  CL59 HEK-293T C318(1.15)  LDD1653  [24]
 LDCM0451  CL6 HEK-293T C318(1.39)  LDD1654  [24]
 LDCM0452  CL60 HEK-293T C318(0.94)  LDD1655  [24]
 LDCM0453  CL61 HEK-293T C318(0.79)  LDD1656  [24]
 LDCM0454  CL62 HEK-293T C318(0.93)  LDD1657  [24]
 LDCM0455  CL63 HEK-293T C318(0.79)  LDD1658  [24]
 LDCM0456  CL64 HEK-293T C318(0.88)  LDD1659  [24]
 LDCM0457  CL65 HEK-293T C318(0.76)  LDD1660  [24]
 LDCM0458  CL66 HEK-293T C318(1.17)  LDD1661  [24]
 LDCM0459  CL67 HEK-293T C318(1.04)  LDD1662  [24]
 LDCM0460  CL68 HEK-293T C318(1.02)  LDD1663  [24]
 LDCM0461  CL69 HEK-293T C318(0.93)  LDD1664  [24]
 LDCM0462  CL7 HEK-293T C318(1.11)  LDD1665  [24]
 LDCM0463  CL70 HEK-293T C318(1.37)  LDD1666  [24]
 LDCM0464  CL71 HEK-293T C318(1.08)  LDD1667  [24]
 LDCM0465  CL72 HEK-293T C318(1.01)  LDD1668  [24]
 LDCM0466  CL73 HEK-293T C318(0.71)  LDD1669  [24]
 LDCM0467  CL74 HEK-293T C318(0.95)  LDD1670  [24]
 LDCM0469  CL76 HEK-293T C318(0.99)  LDD1672  [24]
 LDCM0470  CL77 HEK-293T C318(0.89)  LDD1673  [24]
 LDCM0471  CL78 HEK-293T C318(1.22)  LDD1674  [24]
 LDCM0472  CL79 HEK-293T C318(0.87)  LDD1675  [24]
 LDCM0473  CL8 HEK-293T C318(0.76)  LDD1676  [24]
 LDCM0474  CL80 HEK-293T C318(0.95)  LDD1677  [24]
 LDCM0475  CL81 HEK-293T C318(1.19)  LDD1678  [24]
 LDCM0476  CL82 HEK-293T C318(0.99)  LDD1679  [24]
 LDCM0477  CL83 HEK-293T C318(0.97)  LDD1680  [24]
 LDCM0478  CL84 HEK-293T C318(0.98)  LDD1681  [24]
 LDCM0479  CL85 HEK-293T C318(0.68)  LDD1682  [24]
 LDCM0480  CL86 HEK-293T C318(0.93)  LDD1683  [24]
 LDCM0481  CL87 HEK-293T C318(1.01)  LDD1684  [24]
 LDCM0482  CL88 HEK-293T C318(0.87)  LDD1685  [24]
 LDCM0483  CL89 HEK-293T C318(0.88)  LDD1686  [24]
 LDCM0484  CL9 HEK-293T C318(0.95)  LDD1687  [24]
 LDCM0485  CL90 HEK-293T C318(1.14)  LDD1688  [24]
 LDCM0486  CL91 HEK-293T C318(0.99)  LDD1689  [24]
 LDCM0487  CL92 HEK-293T C318(0.92)  LDD1690  [24]
 LDCM0488  CL93 HEK-293T C318(0.99)  LDD1691  [24]
 LDCM0489  CL94 HEK-293T C318(1.02)  LDD1692  [24]
 LDCM0490  CL95 HEK-293T C318(0.86)  LDD1693  [24]
 LDCM0491  CL96 HEK-293T C318(0.89)  LDD1694  [24]
 LDCM0492  CL97 HEK-293T C318(0.73)  LDD1695  [24]
 LDCM0493  CL98 HEK-293T C318(0.94)  LDD1696  [24]
 LDCM0494  CL99 HEK-293T C318(0.89)  LDD1697  [24]
 LDCM0191  Compound 21 HEK-293T 8.23  LDD0508  [22]
 LDCM0192  Compound 35 HEK-293T 6.58  LDD0509  [22]
 LDCM0193  Compound 36 HEK-293T 9.71  LDD0511  [22]
 LDCM0634  CY-0357 Hep-G2 C8(1.05)  LDD2228  [14]
 LDCM0495  E2913 HEK-293T C318(0.87)  LDD1698  [24]
 LDCM0625  F8 Ramos C318(0.79)  LDD2187  [25]
 LDCM0572  Fragment10 Ramos C318(0.76)  LDD2189  [25]
 LDCM0573  Fragment11 Ramos C318(20.00)  LDD2190  [25]
 LDCM0574  Fragment12 Ramos C318(0.52)  LDD2191  [25]
 LDCM0575  Fragment13 Ramos C318(1.01)  LDD2192  [25]
 LDCM0576  Fragment14 Ramos C318(0.43)  LDD2193  [25]
 LDCM0579  Fragment20 Ramos C318(0.41)  LDD2194  [25]
 LDCM0580  Fragment21 Ramos C318(1.08)  LDD2195  [25]
 LDCM0582  Fragment23 Ramos C318(0.65)  LDD2196  [25]
 LDCM0578  Fragment27 Ramos C318(1.08)  LDD2197  [25]
 LDCM0586  Fragment28 Ramos C318(0.61)  LDD2198  [25]
 LDCM0588  Fragment30 Ramos C318(1.65)  LDD2199  [25]
 LDCM0589  Fragment31 Ramos C318(1.05)  LDD2200  [25]
 LDCM0590  Fragment32 Ramos C318(0.63)  LDD2201  [25]
 LDCM0468  Fragment33 HEK-293T C318(0.92)  LDD1671  [24]
 LDCM0596  Fragment38 Ramos C318(1.58)  LDD2203  [25]
 LDCM0566  Fragment4 Ramos C318(0.71)  LDD2184  [25]
 LDCM0427  Fragment51 HEK-293T C318(0.92)  LDD1631  [24]
 LDCM0610  Fragment52 Ramos C318(1.16)  LDD2204  [25]
 LDCM0614  Fragment56 Ramos C318(1.20)  LDD2205  [25]
 LDCM0569  Fragment7 Ramos C318(0.49)  LDD2186  [25]
 LDCM0571  Fragment9 Ramos C318(0.49)  LDD2188  [25]
 LDCM0107  IAA HeLa N.A.  LDD0221  [19]
 LDCM0179  JZ128 PC-3 N.A.  LDD0462  [8]
 LDCM0022  KB02 HEK-293T C318(1.01)  LDD1492  [24]
 LDCM0023  KB03 HEK-293T C318(0.97)  LDD1497  [24]
 LDCM0024  KB05 HMCB C318(2.02)  LDD3312  [7]
 LDCM0030  Luteolin HEK-293T 10.86  LDD0182  [9]
 LDCM0109  NEM HeLa N.A.  LDD0224  [19]
 LDCM0627  NUDT7-COV-1 HEK-293T C8(0.81)  LDD2206  [26]
 LDCM0032  Oleacein HEK-293T 6.17  LDD0184  [9]
 LDCM0628  OTUB2-COV-1 HEK-293T C8(0.64)  LDD2207  [26]
 LDCM0029  Quercetin HEK-293T 10.42  LDD0181  [9]
 LDCM0131  RA190 MM1.R C318(1.21)  LDD0304  [27]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 4 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Ubiquinone biosynthesis O-methyltransferase, mitochondrial (COQ3) UbiG/COQ3 family Q9NZJ6
Holocytochrome c-type synthase (HCCS) Cytochrome c-type heme lyase family P53701
Epidermal retinol dehydrogenase 2 (SDR16C5) Short-chain dehydrogenases/reductases (SDR) family Q8N3Y7
Peptidyl-prolyl cis-trans isomerase FKBP7 (FKBP7) . Q9Y680
Transporter and channel
Click To Hide/Show 12 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Receptor expression-enhancing protein 6 (REEP6) DP1 family Q96HR9
Endophilin-B1 (SH3GLB1) Endophilin family Q9Y371
Mitochondrial pyruvate carrier 2 (MPC2) Mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family O95563
Prenylated Rab acceptor protein 1 (RABAC1) PRA1 family Q9UI14
Sorting nexin-1 (SNX1) Sorting nexin family Q13596
Sorting nexin-2 (SNX2) Sorting nexin family O60749
Sorting nexin-32 (SNX32) Sorting nexin family Q86XE0
Sorting nexin-5 (SNX5) Sorting nexin family Q9Y5X3
Sorting nexin-6 (SNX6) Sorting nexin family Q9UNH7
Synaptophysin (SYP) Synaptophysin/synaptobrevin family P08247
Vacuolar protein sorting-associated protein 35 (VPS35) VPS35 family Q96QK1
Syntenin-1 (SDCBP) . O00560
Cytokine and receptor
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
CKLF-like MARVEL transmembrane domain-containing protein 5 (CMTM5) Chemokine-like factor family Q96DZ9
Other
Click To Hide/Show 12 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
ADP-ribosylation factor-like protein 6-interacting protein 1 (ARL6IP1) ARL6ip family Q15041
Receptor expression-enhancing protein 5 (REEP5) DP1 family Q00765
Protein FAM25C (FAM25C) FAM25 family B3EWG5
FUN14 domain-containing protein 1 (FUNDC1) FUN14 family Q8IVP5
Perilipin-3 (PLIN3) Perilipin family O60664
Vesicle transport protein SFT2A (SFT2D1) SFT2 family Q8WV19
WASH complex subunit 5 (WASHC5) Strumpellin family Q12768
Lck-interacting transmembrane adapter 1 (LIME1) . Q9H400
Regulator of hemoglobinization and erythroid cell expansion protein (RHEX) . Q6ZWK4
Reticulon-3 (RTN3) . O95197
Reticulon-4 (RTN4) . Q9NQC3
Type-1 angiotensin II receptor-associated protein (AGTRAP) . Q6RW13

References

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2 2H-Azirine-Based Reagents for Chemoselective Bioconjugation at Carboxyl Residues Inside Live Cells. J Am Chem Soc. 2020 Apr 1;142(13):6051-6059. doi: 10.1021/jacs.9b12116. Epub 2020 Mar 23.
3 Chemoproteomic profiling of kinases in live cells using electrophilic sulfonyl triazole probes. Chem Sci. 2021 Jan 21;12(9):3295-3307. doi: 10.1039/d0sc06623k.
4 Tranylcypromine specificity for monoamine oxidase is limited by promiscuous protein labelling and lysosomal trapping. RSC Chem Biol. 2020 Aug 12;1(4):209-213. doi: 10.1039/d0cb00048e. eCollection 2020 Oct 1.
Mass spectrometry data entry: PXD018580
5 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
6 An Azo Coupling-Based Chemoproteomic Approach to Systematically Profile the Tyrosine Reactivity in the Human Proteome. Anal Chem. 2021 Jul 27;93(29):10334-10342. doi: 10.1021/acs.analchem.1c01935. Epub 2021 Jul 12.
7 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
8 A Chemoproteomic Strategy for Direct and Proteome-Wide Covalent Inhibitor Target-Site Identification. J Am Chem Soc. 2019 Jan 9;141(1):191-203. doi: 10.1021/jacs.8b07911. Epub 2018 Dec 20.
9 A chemical probe unravels the reactive proteome of health-associated catechols. Chem Sci. 2023 Jul 22;14(32):8635-8643. doi: 10.1039/d3sc00888f. eCollection 2023 Aug 16.
Mass spectrometry data entry: PXD043348
10 Global profiling of functional histidines in live cells using small-molecule photosensitizer and chemical probe relay labelling. Nat Chem. 2024 Jun 4. doi: 10.1038/s41557-024-01545-6. Online ahead of print.
Mass spectrometry data entry: PXD042377
11 Targeted Proteomic Approaches for Proteome-Wide Characterizations of the AMP-Binding Capacities of Kinases. J Proteome Res. 2022 Aug 5;21(8):2063-2070. doi: 10.1021/acs.jproteome.2c00225. Epub 2022 Jul 12.
12 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
13 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
14 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
15 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
16 Solid Phase Synthesis of Fluorosulfate Containing Macrocycles for Chemoproteomic Workflows. bioRxiv [Preprint]. 2023 Feb 18:2023.02.17.529022. doi: 10.1101/2023.02.17.529022.
Mass spectrometry data entry: PXD039931
17 DFT-Guided Discovery of Ethynyl-Triazolyl-Phosphinates as Modular Electrophiles for Chemoselective Cysteine Bioconjugation and Profiling. Angew Chem Int Ed Engl. 2022 Oct 10;61(41):e202205348. doi: 10.1002/anie.202205348. Epub 2022 Aug 22.
Mass spectrometry data entry: PXD033004
18 Oxidative cyclization reagents reveal tryptophan cation- interactions. Nature. 2024 Mar;627(8004):680-687. doi: 10.1038/s41586-024-07140-6. Epub 2024 Mar 6.
Mass spectrometry data entry: PXD001377 , PXD005252
19 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
20 Oxidant-Induced Bioconjugation for Protein Labeling in Live Cells. ACS Chem Biol. 2023 Jan 20;18(1):112-122. doi: 10.1021/acschembio.2c00740. Epub 2022 Dec 21.
21 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
22 Ligand and Target Discovery by Fragment-Based Screening in Human Cells. Cell. 2017 Jan 26;168(3):527-541.e29. doi: 10.1016/j.cell.2016.12.029. Epub 2017 Jan 19.
23 Pharmacological Targeting of Vacuolar H(+)-ATPase via Subunit V1G Combats Multidrug-Resistant Cancer. Cell Chem Biol. 2020 Nov 19;27(11):1359-1370.e8. doi: 10.1016/j.chembiol.2020.06.011. Epub 2020 Jul 9.
24 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
25 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
26 Rapid Covalent-Probe Discovery by Electrophile-Fragment Screening. J Am Chem Soc. 2019 Jun 5;141(22):8951-8968. doi: 10.1021/jacs.9b02822. Epub 2019 May 22.
27 Physical and Functional Analysis of the Putative Rpn13 Inhibitor RA190. Cell Chem Biol. 2020 Nov 19;27(11):1371-1382.e6. doi: 10.1016/j.chembiol.2020.08.007. Epub 2020 Aug 27.