General Information of Target

Target ID LDTP03363
Target Name High mobility group protein B2 (HMGB2)
Gene Name HMGB2
Gene ID 3148
Synonyms
HMG2; High mobility group protein B2; High mobility group protein 2; HMG-2
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF
EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL
SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG
SKKKNEPEDEEEEEEEEDEDEEEEDEDEE
Target Type
Literature-reported
Target Bioclass
Transcription factor
Family
HMGB family
Subcellular location
Nucleus
Function
Multifunctional protein with various roles in different cellular compartments. May act in a redox sensitive manner. In the nucleus is an abundant chromatin-associated non-histone protein involved in transcription, chromatin remodeling and V(D)J recombination and probably other processes. Binds DNA with a preference to non-canonical DNA structures such as single-stranded DNA. Can bent DNA and enhance DNA flexibility by looping thus providing a mechanism to promote activities on various gene promoters by enhancing transcription factor binding and/or bringing distant regulatory sequences into close proximity . Involved in V(D)J recombination by acting as a cofactor of the RAG complex: acts by stimulating cleavage and RAG protein binding at the 23 bp spacer of conserved recombination signal sequences (RSS). Proposed to be involved in the innate immune response to nucleic acids by acting as a promiscuous immunogenic DNA/RNA sensor which cooperates with subsequent discriminative sensing by specific pattern recognition receptors. In the extracellular compartment acts as a chemokine. Promotes proliferation and migration of endothelial cells implicating AGER/RAGE. Has antimicrobial activity in gastrointestinal epithelial tissues. Involved in inflammatory response to antigenic stimulus coupled with pro-inflammatory activity. Involved in modulation of neurogenesis probably by regulation of neural stem proliferation. Involved in articular cartilage surface maintenance implicating LEF1 and the Wnt/beta-catenin pathway.
TTD ID
T12974
Uniprot ID
P26583
DrugMap ID
TTA78JQ
Ensemble ID
ENST00000296503.10
HGNC ID
HGNC:5000
ChEMBL ID
CHEMBL4295734

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 39 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info 
11.35  LDD0402  [1]
A-EBA
 Probe Info 
4.41  LDD0215  [2]
FBP2
 Probe Info 
2.42  LDD0323  [3]
TH211
 Probe Info 
Y78(10.20)  LDD0257  [4]
ONAyne
 Probe Info 
K59(0.00); K30(0.00); K128(0.00); K147(0.00)  LDD0273  [5]
Probe 1
 Probe Info 
Y78(27.25)  LDD3495  [6]
HHS-475
 Probe Info 
Y78(0.54); Y155(0.57); Y162(0.96); Y144(0.97)  LDD0264  [7]
HHS-465
 Probe Info 
Y16(10.00); Y162(10.00)  LDD2237  [8]
DBIA
 Probe Info 
C106(1.11)  LDD0531  [9]
5E-2FA
 Probe Info 
H117(0.00); H31(0.00); H109(0.00)  LDD2235  [10]
AMP probe
 Probe Info 
N.A.  LDD0200  [11]
ATP probe
 Probe Info 
K114(0.00); K128(0.00); K30(0.00); K147(0.00)  LDD0199  [11]
CY-1
 Probe Info 
N.A.  LDD0246  [12]
4-Iodoacetamidophenylacetylene
 Probe Info 
C106(0.00); C23(0.00)  LDD0038  [13]
IA-alkyne
 Probe Info 
N.A.  LDD0032  [14]
IPIAA_H
 Probe Info 
C23(0.00); C106(0.00)  LDD0030  [15]
IPIAA_L
 Probe Info 
C106(0.00); C23(0.00)  LDD0031  [15]
Lodoacetamide azide
 Probe Info 
N.A.  LDD0037  [13]
ATP probe
 Probe Info 
K85(0.00); K157(0.00); K147(0.00); K12(0.00)  LDD0035  [16]
IPM
 Probe Info 
N.A.  LDD0025  [17]
JW-RF-010
 Probe Info 
N.A.  LDD0026  [17]
NAIA_4
 Probe Info 
N.A.  LDD2226  [18]
TFBX
 Probe Info 
N.A.  LDD0027  [17]
Compound 10
 Probe Info 
N.A.  LDD2216  [19]
Compound 11
 Probe Info 
N.A.  LDD2213  [19]
NHS
 Probe Info 
K30(0.00); K65(0.00); K139(0.00); K157(0.00)  LDD0010  [20]
OSF
 Probe Info 
N.A.  LDD0029  [21]
SF
 Probe Info 
K3(0.00); K157(0.00); K147(0.00); Y162(0.00)  LDD0028  [21]
STPyne
 Probe Info 
K30(0.00); K128(0.00); K157(0.00); K147(0.00)  LDD0009  [20]
Ox-W18
 Probe Info 
N.A.  LDD2175  [22]
1c-yne
 Probe Info 
K128(0.00); K43(0.00)  LDD0228  [23]
1d-yne
 Probe Info 
N.A.  LDD0357  [23]
Acrolein
 Probe Info 
H117(0.00); H31(0.00); C23(0.00)  LDD0217  [24]
Crotonaldehyde
 Probe Info 
N.A.  LDD0219  [24]
Methacrolein
 Probe Info 
N.A.  LDD0218  [24]
W1
 Probe Info 
N.A.  LDD0236  [25]
AOyne
 Probe Info 
12.60  LDD0443  [26]
NAIA_5
 Probe Info 
N.A.  LDD2223  [18]
TPP-AC
 Probe Info 
N.A.  LDD0427  [27]
PAL-AfBPP Probe
Click To Hide/Show 5 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
C278
 Probe Info 
48.50  LDD1948  [28]
FFF probe13
 Probe Info 
5.46  LDD0475  [29]
FFF probe14
 Probe Info 
9.13  LDD0477  [29]
FFF probe4
 Probe Info 
9.99  LDD0466  [29]
DA-2
 Probe Info 
N.A.  LDD0073  [30]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0214  AC1 HCT 116 C106(1.11)  LDD0531  [9]
 LDCM0216  AC100 HCT 116 C106(0.90)  LDD0533  [9]
 LDCM0217  AC101 HCT 116 C106(1.50)  LDD0534  [9]
 LDCM0218  AC102 HCT 116 C106(1.05)  LDD0535  [9]
 LDCM0219  AC103 HCT 116 C106(1.41)  LDD0536  [9]
 LDCM0220  AC104 HCT 116 C106(1.76)  LDD0537  [9]
 LDCM0221  AC105 HCT 116 C106(0.90)  LDD0538  [9]
 LDCM0222  AC106 HCT 116 C106(1.07)  LDD0539  [9]
 LDCM0223  AC107 HCT 116 C106(1.81)  LDD0540  [9]
 LDCM0224  AC108 HCT 116 C106(0.93)  LDD0541  [9]
 LDCM0225  AC109 HCT 116 C106(1.40)  LDD0542  [9]
 LDCM0226  AC11 HEK-293T C106(0.93)  LDD1509  [31]
 LDCM0227  AC110 HCT 116 C106(1.24)  LDD0544  [9]
 LDCM0228  AC111 HCT 116 C106(1.61)  LDD0545  [9]
 LDCM0229  AC112 HCT 116 C106(1.57)  LDD0546  [9]
 LDCM0230  AC113 HCT 116 C106(1.33)  LDD0547  [9]
 LDCM0231  AC114 HCT 116 C106(1.49)  LDD0548  [9]
 LDCM0232  AC115 HCT 116 C106(1.22)  LDD0549  [9]
 LDCM0233  AC116 HCT 116 C106(1.04)  LDD0550  [9]
 LDCM0234  AC117 HCT 116 C106(0.89)  LDD0551  [9]
 LDCM0235  AC118 HCT 116 C106(0.76)  LDD0552  [9]
 LDCM0236  AC119 HCT 116 C106(0.80)  LDD0553  [9]
 LDCM0237  AC12 HEK-293T C106(0.91)  LDD1510  [31]
 LDCM0238  AC120 HCT 116 C106(3.44)  LDD0555  [9]
 LDCM0239  AC121 HCT 116 C106(2.42)  LDD0556  [9]
 LDCM0240  AC122 HCT 116 C106(1.31)  LDD0557  [9]
 LDCM0241  AC123 HCT 116 C106(3.93)  LDD0558  [9]
 LDCM0242  AC124 HCT 116 C106(1.44)  LDD0559  [9]
 LDCM0243  AC125 HCT 116 C106(1.86)  LDD0560  [9]
 LDCM0244  AC126 HCT 116 C106(1.62)  LDD0561  [9]
 LDCM0245  AC127 HCT 116 C106(1.09)  LDD0562  [9]
 LDCM0259  AC14 HEK-293T C106(0.88)  LDD1512  [31]
 LDCM0270  AC15 HEK-293T C106(0.92)  LDD1513  [31]
 LDCM0276  AC17 HCT 116 C106(1.04)  LDD0593  [9]
 LDCM0277  AC18 HCT 116 C106(1.09)  LDD0594  [9]
 LDCM0278  AC19 HCT 116 C106(0.99)  LDD0595  [9]
 LDCM0279  AC2 HCT 116 C106(0.85)  LDD0596  [9]
 LDCM0280  AC20 HCT 116 C106(1.01)  LDD0597  [9]
 LDCM0281  AC21 HCT 116 C106(1.04)  LDD0598  [9]
 LDCM0282  AC22 HCT 116 C106(1.05)  LDD0599  [9]
 LDCM0283  AC23 HCT 116 C106(0.95)  LDD0600  [9]
 LDCM0284  AC24 HCT 116 C106(0.95)  LDD0601  [9]
 LDCM0285  AC25 HEK-293T C106(0.98)  LDD1524  [31]
 LDCM0287  AC27 HEK-293T C106(0.97)  LDD1526  [31]
 LDCM0288  AC28 HEK-293T C106(1.00)  LDD1527  [31]
 LDCM0290  AC3 HCT 116 C106(0.81)  LDD0607  [9]
 LDCM0291  AC30 HEK-293T C106(1.09)  LDD1530  [31]
 LDCM0292  AC31 HEK-293T C106(0.99)  LDD1531  [31]
 LDCM0294  AC33 HEK-293T C106(0.97)  LDD1533  [31]
 LDCM0296  AC35 HEK-293T C106(1.01)  LDD1535  [31]
 LDCM0297  AC36 HEK-293T C106(1.00)  LDD1536  [31]
 LDCM0299  AC38 HEK-293T C106(0.94)  LDD1538  [31]
 LDCM0300  AC39 HEK-293T C106(1.01)  LDD1539  [31]
 LDCM0301  AC4 HCT 116 C106(0.83)  LDD0618  [9]
 LDCM0303  AC41 HEK-293T C106(0.97)  LDD1542  [31]
 LDCM0305  AC43 HEK-293T C106(0.95)  LDD1544  [31]
 LDCM0306  AC44 HEK-293T C106(0.95)  LDD1545  [31]
 LDCM0308  AC46 HEK-293T C106(0.93)  LDD1547  [31]
 LDCM0309  AC47 HEK-293T C106(1.00)  LDD1548  [31]
 LDCM0311  AC49 HEK-293T C106(1.00)  LDD1550  [31]
 LDCM0312  AC5 HCT 116 C106(0.90)  LDD0629  [9]
 LDCM0314  AC51 HEK-293T C106(1.04)  LDD1553  [31]
 LDCM0315  AC52 HEK-293T C106(0.99)  LDD1554  [31]
 LDCM0317  AC54 HEK-293T C106(0.99)  LDD1556  [31]
 LDCM0318  AC55 HEK-293T C106(1.04)  LDD1557  [31]
 LDCM0320  AC57 HCT 116 C106(0.80)  LDD0637  [9]
 LDCM0321  AC58 HCT 116 C106(1.13)  LDD0638  [9]
 LDCM0322  AC59 HCT 116 C106(0.99)  LDD0639  [9]
 LDCM0323  AC6 HEK-293T C106(1.02)  LDD1562  [31]
 LDCM0324  AC60 HCT 116 C106(1.20)  LDD0641  [9]
 LDCM0325  AC61 HCT 116 C106(0.98)  LDD0642  [9]
 LDCM0326  AC62 HCT 116 C106(0.97)  LDD0643  [9]
 LDCM0327  AC63 HCT 116 C106(1.02)  LDD0644  [9]
 LDCM0328  AC64 HCT 116 C106(1.09)  LDD0645  [9]
 LDCM0329  AC65 HCT 116 C106(1.09)  LDD0646  [9]
 LDCM0330  AC66 HCT 116 C106(0.97)  LDD0647  [9]
 LDCM0331  AC67 HCT 116 C106(1.04)  LDD0648  [9]
 LDCM0332  AC68 HCT 116 C106(1.11)  LDD0649  [9]
 LDCM0333  AC69 HCT 116 C106(1.24)  LDD0650  [9]
 LDCM0334  AC7 HEK-293T C106(1.03)  LDD1568  [31]
 LDCM0335  AC70 HCT 116 C106(0.71)  LDD0652  [9]
 LDCM0336  AC71 HCT 116 C106(1.27)  LDD0653  [9]
 LDCM0337  AC72 HCT 116 C106(0.86)  LDD0654  [9]
 LDCM0338  AC73 HCT 116 C106(0.82)  LDD0655  [9]
 LDCM0339  AC74 HCT 116 C106(1.04)  LDD0656  [9]
 LDCM0340  AC75 HCT 116 C106(0.98)  LDD0657  [9]
 LDCM0341  AC76 HCT 116 C106(0.84)  LDD0658  [9]
 LDCM0342  AC77 HCT 116 C106(1.22)  LDD0659  [9]
 LDCM0343  AC78 HCT 116 C106(0.99)  LDD0660  [9]
 LDCM0344  AC79 HCT 116 C106(1.03)  LDD0661  [9]
 LDCM0346  AC80 HCT 116 C106(0.94)  LDD0663  [9]
 LDCM0347  AC81 HCT 116 C106(0.86)  LDD0664  [9]
 LDCM0348  AC82 HCT 116 C106(0.77)  LDD0665  [9]
 LDCM0365  AC98 HCT 116 C106(0.92)  LDD0682  [9]
 LDCM0366  AC99 HCT 116 C106(0.81)  LDD0683  [9]
 LDCM0356  AKOS034007680 HEK-293T C106(0.94)  LDD1570  [31]
 LDCM0020  ARS-1620 HCC44 C23(1.25)  LDD2171  [9]
 LDCM0108  Chloroacetamide HeLa H117(0.00); H31(0.00)  LDD0222  [24]
 LDCM0632  CL-Sc Hep-G2 C106(0.40)  LDD2227  [18]
 LDCM0367  CL1 HEK-293T C106(0.93)  LDD1571  [31]
 LDCM0368  CL10 HEK-293T C106(0.42)  LDD1572  [31]
 LDCM0369  CL100 HCT 116 C106(1.07)  LDD0686  [9]
 LDCM0370  CL101 HEK-293T C106(1.00)  LDD1574  [31]
 LDCM0373  CL104 HEK-293T C106(1.17)  LDD1577  [31]
 LDCM0374  CL105 HCT 116 C106(0.86)  LDD0691  [9]
 LDCM0375  CL106 HCT 116 C106(0.82)  LDD0692  [9]
 LDCM0376  CL107 HCT 116 C106(0.91)  LDD0693  [9]
 LDCM0377  CL108 HCT 116 C106(0.90)  LDD0694  [9]
 LDCM0378  CL109 HCT 116 C106(0.86)  LDD0695  [9]
 LDCM0379  CL11 HEK-293T C106(0.62)  LDD1583  [31]
 LDCM0380  CL110 HCT 116 C106(0.78)  LDD0697  [9]
 LDCM0381  CL111 HCT 116 C106(1.01)  LDD0698  [9]
 LDCM0382  CL112 HEK-293T C106(1.09)  LDD1586  [31]
 LDCM0383  CL113 HEK-293T C106(1.15)  LDD1587  [31]
 LDCM0386  CL116 HEK-293T C106(1.11)  LDD1590  [31]
 LDCM0387  CL117 HEK-293T C106(1.12)  LDD1591  [31]
 LDCM0391  CL120 HEK-293T C106(1.17)  LDD1595  [31]
 LDCM0392  CL121 HEK-293T C106(1.01)  LDD1596  [31]
 LDCM0395  CL124 HEK-293T C106(1.01)  LDD1599  [31]
 LDCM0396  CL125 HCT 116 C106(0.98)  LDD0713  [9]
 LDCM0397  CL126 HCT 116 C106(1.03)  LDD0714  [9]
 LDCM0398  CL127 HCT 116 C106(1.13)  LDD0715  [9]
 LDCM0399  CL128 HCT 116 C106(0.90)  LDD0716  [9]
 LDCM0400  CL13 HEK-293T C106(0.90)  LDD1604  [31]
 LDCM0403  CL16 HEK-293T C106(0.95)  LDD1607  [31]
 LDCM0404  CL17 HCT 116 C106(0.36)  LDD0721  [9]
 LDCM0405  CL18 HCT 116 C106(0.45)  LDD0722  [9]
 LDCM0406  CL19 HCT 116 C106(0.65)  LDD0723  [9]
 LDCM0408  CL20 HCT 116 C106(0.89)  LDD0725  [9]
 LDCM0409  CL21 HCT 116 C106(0.45)  LDD0726  [9]
 LDCM0410  CL22 HCT 116 C106(3.35)  LDD0727  [9]
 LDCM0411  CL23 HCT 116 C106(0.89)  LDD0728  [9]
 LDCM0412  CL24 HCT 116 C106(0.75)  LDD0729  [9]
 LDCM0413  CL25 HCT 116 C106(0.35)  LDD0730  [9]
 LDCM0414  CL26 HCT 116 C106(0.61)  LDD0731  [9]
 LDCM0415  CL27 HCT 116 C106(0.77)  LDD0732  [9]
 LDCM0416  CL28 HCT 116 C106(0.32)  LDD0733  [9]
 LDCM0417  CL29 HCT 116 C106(1.33)  LDD0734  [9]
 LDCM0419  CL30 HCT 116 C106(0.69)  LDD0736  [9]
 LDCM0420  CL31 HCT 116 C106(0.52)  LDD0737  [9]
 LDCM0421  CL32 HEK-293T C106(0.54)  LDD1625  [31]
 LDCM0423  CL34 HEK-293T C106(0.44)  LDD1627  [31]
 LDCM0424  CL35 HEK-293T C106(0.63)  LDD1628  [31]
 LDCM0426  CL37 HEK-293T C106(1.05)  LDD1630  [31]
 LDCM0429  CL4 HEK-293T C106(0.83)  LDD1633  [31]
 LDCM0430  CL40 HEK-293T C106(1.04)  LDD1634  [31]
 LDCM0431  CL41 HEK-293T C106(0.81)  LDD1635  [31]
 LDCM0433  CL43 HEK-293T C106(0.76)  LDD1637  [31]
 LDCM0434  CL44 HEK-293T C106(0.54)  LDD1638  [31]
 LDCM0436  CL46 HEK-293T C106(0.42)  LDD1640  [31]
 LDCM0437  CL47 HEK-293T C106(0.61)  LDD1641  [31]
 LDCM0439  CL49 HEK-293T C106(1.00)  LDD1643  [31]
 LDCM0440  CL5 HEK-293T C106(0.67)  LDD1644  [31]
 LDCM0443  CL52 HEK-293T C106(1.03)  LDD1646  [31]
 LDCM0444  CL53 HEK-293T C106(0.74)  LDD1647  [31]
 LDCM0446  CL55 HEK-293T C106(0.71)  LDD1649  [31]
 LDCM0447  CL56 HEK-293T C106(0.51)  LDD1650  [31]
 LDCM0449  CL58 HEK-293T C106(0.42)  LDD1652  [31]
 LDCM0450  CL59 HEK-293T C106(0.67)  LDD1653  [31]
 LDCM0453  CL61 HEK-293T C106(1.17)  LDD1656  [31]
 LDCM0456  CL64 HEK-293T C106(0.91)  LDD1659  [31]
 LDCM0457  CL65 HEK-293T C106(0.90)  LDD1660  [31]
 LDCM0459  CL67 HEK-293T C106(0.78)  LDD1662  [31]
 LDCM0460  CL68 HEK-293T C106(0.56)  LDD1663  [31]
 LDCM0462  CL7 HEK-293T C106(0.69)  LDD1665  [31]
 LDCM0463  CL70 HEK-293T C106(0.48)  LDD1666  [31]
 LDCM0464  CL71 HEK-293T C106(0.61)  LDD1667  [31]
 LDCM0466  CL73 HEK-293T C106(1.09)  LDD1669  [31]
 LDCM0469  CL76 HEK-293T C106(1.01)  LDD1672  [31]
 LDCM0470  CL77 HEK-293T C106(0.72)  LDD1673  [31]
 LDCM0472  CL79 HEK-293T C106(0.73)  LDD1675  [31]
 LDCM0473  CL8 HEK-293T C106(0.38)  LDD1676  [31]
 LDCM0474  CL80 HEK-293T C106(0.60)  LDD1677  [31]
 LDCM0476  CL82 HEK-293T C106(0.51)  LDD1679  [31]
 LDCM0477  CL83 HEK-293T C106(0.66)  LDD1680  [31]
 LDCM0479  CL85 HEK-293T C106(0.97)  LDD1682  [31]
 LDCM0482  CL88 HEK-293T C106(0.97)  LDD1685  [31]
 LDCM0483  CL89 HEK-293T C106(0.79)  LDD1686  [31]
 LDCM0486  CL91 HCT 116 C106(1.23)  LDD0803  [9]
 LDCM0487  CL92 HCT 116 C106(1.11)  LDD0804  [9]
 LDCM0488  CL93 HCT 116 C106(0.73)  LDD0805  [9]
 LDCM0489  CL94 HCT 116 C106(1.15)  LDD0806  [9]
 LDCM0490  CL95 HCT 116 C106(0.92)  LDD0807  [9]
 LDCM0491  CL96 HCT 116 C106(1.09)  LDD0808  [9]
 LDCM0492  CL97 HCT 116 C106(1.29)  LDD0809  [9]
 LDCM0493  CL98 HCT 116 C106(0.99)  LDD0810  [9]
 LDCM0494  CL99 HCT 116 C106(1.02)  LDD0811  [9]
 LDCM0573  Fragment11 Ramos C106(20.00)  LDD2190  [32]
 LDCM0576  Fragment14 Ramos C106(0.63)  LDD2193  [32]
 LDCM0586  Fragment28 Ramos C106(1.35)  LDD2198  [32]
 LDCM0566  Fragment4 Ramos C106(0.56)  LDD2184  [32]
 LDCM0569  Fragment7 Ramos C106(0.42)  LDD2186  [32]
 LDCM0116  HHS-0101 DM93 Y78(0.54); Y155(0.57); Y162(0.96); Y144(0.97)  LDD0264  [7]
 LDCM0117  HHS-0201 DM93 Y155(0.41); Y78(0.68); Y144(0.82); Y162(0.84)  LDD0265  [7]
 LDCM0118  HHS-0301 DM93 Y78(0.38); Y155(0.52); Y144(0.87); Y162(0.88)  LDD0266  [7]
 LDCM0119  HHS-0401 DM93 Y78(0.53); Y155(0.55); Y162(0.90); Y144(0.99)  LDD0267  [7]
 LDCM0120  HHS-0701 DM93 Y155(0.46); Y162(0.93); Y78(0.94); Y144(1.10)  LDD0268  [7]
 LDCM0107  IAA HeLa H117(0.00); H31(0.00)  LDD0221  [24]
 LDCM0022  KB02 HEK-293T C106(1.13)  LDD1492  [31]
 LDCM0023  KB03 HEK-293T C106(0.98)  LDD1497  [31]
 LDCM0024  KB05 IGR37 C106(1.44)  LDD3314  [33]
 LDCM0109  NEM HeLa H117(0.00); H31(0.00)  LDD0223  [24]
 LDCM0021  THZ1 HCT 116 C23(1.25)  LDD2173  [9]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Transcription factor
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Homeobox protein PKNOX1 (PKNOX1) TALE/MEIS homeobox family P55347
Other
Click To Hide/Show 5 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Ribosome biogenesis protein NOP53 (NOP53) NOP53 family Q9NZM5
Migration and invasion enhancer 1 (MIEN1) SelWTH family Q9BRT3
Translin-associated protein X (TSNAX) Translin family Q99598
COMM domain-containing protein 1 (COMMD1) . Q8N668
Zinc finger protein 428 (ZNF428) . Q96B54

References

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2 2-Ethynylbenzaldehyde-Based, Lysine-Targeting Irreversible Covalent Inhibitors for Protein Kinases and Nonkinases. J Am Chem Soc. 2023 Feb 12. doi: 10.1021/jacs.2c11595. Online ahead of print.
Mass spectrometry data entry: PXD037665
3 Tranylcypromine specificity for monoamine oxidase is limited by promiscuous protein labelling and lysosomal trapping. RSC Chem Biol. 2020 Aug 12;1(4):209-213. doi: 10.1039/d0cb00048e. eCollection 2020 Oct 1.
Mass spectrometry data entry: PXD018580
4 Chemoproteomic profiling of kinases in live cells using electrophilic sulfonyl triazole probes. Chem Sci. 2021 Jan 21;12(9):3295-3307. doi: 10.1039/d0sc06623k.
5 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
6 An Azo Coupling-Based Chemoproteomic Approach to Systematically Profile the Tyrosine Reactivity in the Human Proteome. Anal Chem. 2021 Jul 27;93(29):10334-10342. doi: 10.1021/acs.analchem.1c01935. Epub 2021 Jul 12.
7 Discovery of a Cell-Active SuTEx Ligand of Prostaglandin Reductase 2. Chembiochem. 2021 Jun 15;22(12):2134-2139. doi: 10.1002/cbic.202000879. Epub 2021 Apr 29.
8 Global targeting of functional tyrosines using sulfur-triazole exchange chemistry. Nat Chem Biol. 2020 Feb;16(2):150-159. doi: 10.1038/s41589-019-0404-5. Epub 2019 Nov 25.
9 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
10 Global profiling of functional histidines in live cells using small-molecule photosensitizer and chemical probe relay labelling. Nat Chem. 2024 Jun 4. doi: 10.1038/s41557-024-01545-6. Online ahead of print.
Mass spectrometry data entry: PXD042377
11 Targeted Proteomic Approaches for Proteome-Wide Characterizations of the AMP-Binding Capacities of Kinases. J Proteome Res. 2022 Aug 5;21(8):2063-2070. doi: 10.1021/acs.jproteome.2c00225. Epub 2022 Jul 12.
12 Cyclopropenone, Cyclopropeniminium Ion, and Cyclopropenethione as Novel Electrophilic Warheads for Potential Target Discovery of Triple-Negative Breast Cancer. J Med Chem. 2023 Feb 23;66(4):2851-2864. doi: 10.1021/acs.jmedchem.2c01889. Epub 2023 Feb 10.
13 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
14 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
15 SP3-Enabled Rapid and High Coverage Chemoproteomic Identification of Cell-State-Dependent Redox-Sensitive Cysteines. Mol Cell Proteomics. 2022 Apr;21(4):100218. doi: 10.1016/j.mcpro.2022.100218. Epub 2022 Feb 25.
Mass spectrometry data entry: PXD029500 , PXD031647
16 Comparison of Quantitative Mass Spectrometry Platforms for Monitoring Kinase ATP Probe Uptake in Lung Cancer. J Proteome Res. 2018 Jan 5;17(1):63-75. doi: 10.1021/acs.jproteome.7b00329. Epub 2017 Nov 22.
Mass spectrometry data entry: PXD006095 , PXD006096
17 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
18 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
19 Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling. Anal Chem. 2021 Feb 2;93(4):2610-2618. doi: 10.1021/acs.analchem.0c04726. Epub 2021 Jan 20.
Mass spectrometry data entry: PXD022279
20 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
21 Solid Phase Synthesis of Fluorosulfate Containing Macrocycles for Chemoproteomic Workflows. bioRxiv [Preprint]. 2023 Feb 18:2023.02.17.529022. doi: 10.1101/2023.02.17.529022.
Mass spectrometry data entry: PXD039931
22 Oxidative cyclization reagents reveal tryptophan cation- interactions. Nature. 2024 Mar;627(8004):680-687. doi: 10.1038/s41586-024-07140-6. Epub 2024 Mar 6.
Mass spectrometry data entry: PXD001377 , PXD005252
23 Tunable Amine-Reactive Electrophiles for Selective Profiling of Lysine. Angew Chem Int Ed Engl. 2022 Jan 26;61(5):e202112107. doi: 10.1002/anie.202112107. Epub 2021 Dec 16.
24 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
25 Oxidant-Induced Bioconjugation for Protein Labeling in Live Cells. ACS Chem Biol. 2023 Jan 20;18(1):112-122. doi: 10.1021/acschembio.2c00740. Epub 2022 Dec 21.
26 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
27 Differently Tagged Probes for Protein Profiling of Mitochondria. Chembiochem. 2019 May 2;20(9):1155-1160. doi: 10.1002/cbic.201800735. Epub 2019 Mar 26.
28 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587
29 Ligand and Target Discovery by Fragment-Based Screening in Human Cells. Cell. 2017 Jan 26;168(3):527-541.e29. doi: 10.1016/j.cell.2016.12.029. Epub 2017 Jan 19.
30 Cell-based proteome profiling of potential dasatinib targets by use of affinity-based probes. J Am Chem Soc. 2012 Feb 15;134(6):3001-14. doi: 10.1021/ja208518u. Epub 2012 Feb 1.
31 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
32 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
33 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840