General Information of Experiment

Probe Name Alkyne-RA190  Probe Info 
Probe concentration 30 uM
Criteria Quantification: Probe vs (Probe+Competitor)
Quantitative Method
LFQ
Competitor Name RA190  Competitor Info 
Competitor Concentration 5 uM
In Vivo Experiment Model Model Type Living cell
Derived Tissue Peripheral blood
Disease Model Plasma cell myeloma [ICD-11:2A83]
Model Name Human plasma cell myeloma cells (MM1.R)

Interaction Altas of This Experiment [1]

Enzyme
Click to Show/Hide to Show 37 Protein Related to This Bioclass
Target ID Target Name Binding Ratio
 LDTP07362  Atlastin-3 (ATL3) 9.9
 LDTP02812  Beta-galactoside alpha-2,6-sialyltransferase 1 (ST6GAL1) 9.0
 LDTP00294  26S proteasome non-ATPase regulatory subunit 14 (PSMD14) 8.0
 LDTP15154  Dehydrogenase/reductase SDR family member 13 (DHRS13) 7.7
 LDTP04358  Carnitine O-palmitoyltransferase 1, liver isoform (CPT1A) 5.3
 LDTP11127  ADP-dependent glucokinase (ADPGK) 5.0
 LDTP12105  L-2-hydroxyglutarate dehydrogenase, mitochondrial (L2HGDH) 5.0
 LDTP07967  Lysophosphatidylcholine acyltransferase 2 (LPCAT2) 4.8
 LDTP19892  DGAT1/2-independent enzyme synthesizing storage lipids (TMEM68) 4.7
 LDTP10432  ATP synthase membrane subunit K, mitochondrial (ATP5MK) 4.4
 LDTP07290  Lysophospholipid acyltransferase LPCAT4 (LPCAT4) 4.4
 LDTP01462  Endonuclease domain-containing 1 protein (ENDOD1) 4.1
 LDTP03458  ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (CD38) 4.1
 LDTP10201  Atypical kinase COQ8B, mitochondrial (COQ8B) 3.9
 LDTP04889  Signal peptidase complex subunit 3 (SPCS3) 3.6
 LDTP13282  Prenylcysteine oxidase 1 (PCYOX1) 3.4
 LDTP10888  Legumain (LGMN) 3.2
 LDTP04310  E3 SUMO-protein ligase RanBP2 (RANBP2) 3.2
 LDTP14074  Ribosomal biogenesis protein LAS1L (LAS1L) 3.1
 LDTP03985  Caspase-2 (CASP2) 2.9
 LDTP10038  Mitochondrial ubiquitin ligase activator of NFKB 1 (MUL1) 2.9
 LDTP03540  Heme oxygenase 2 (HMOX2) 2.9
 LDTP07227  Threonylcarbamoyladenosine tRNA methylthiotransferase (CDKAL1) 2.9
 LDTP08799  Lysophosphatidylserine lipase ABHD12 (ABHD12) 2.8
 LDTP01514  NADH dehydrogenase 1 beta subcomplex subunit 4 (NDUFB4) 2.6
 LDTP04690  Double-stranded RNA-specific adenosine deaminase (ADAR) 2.6
 LDTP07511  Long-chain fatty acid transport protein 4 (SLC27A4) 2.6
 LDTP00597  Serine palmitoyltransferase 1 (SPTLC1) 2.4
 LDTP10399  Serine/threonine-protein phosphatase PGAM5, mitochondrial (PGAM5) 2.4
 LDTP04519  Kinesin-like protein KIF11 (KIF11) 2.4
 LDTP06104  Peptidyl-prolyl cis-trans isomerase FKBP8 (FKBP8) 2.3
 LDTP10077  Patatin-like phospholipase domain-containing protein 2 (PNPLA2) 2.3
 LDTP08156  Schlafen family member 11 (SLFN11) 2.2
 LDTP10471  Protein disulfide-isomerase TMX3 (TMX3) 2.2
 LDTP02055  Thymidylate synthase (TYMS) 2.2
 LDTP13675  COP9 signalosome complex subunit 3 (COPS3) 2.1
 LDTP13533  Long-chain-fatty-acid--CoA ligase 5 (ACSL5) 2.1
Transporter and channel
Click to Show/Hide to Show 23 Protein Related to This Bioclass
Target ID Target Name Binding Ratio
 LDTP15898  HIG1 domain family member 2A, mitochondrial (HIGD2A) 79.1
 LDTP04407  Amiloride-sensitive sodium channel subunit beta (SCNN1B) 17.0
 LDTP01060  PRA1 family protein 2 (PRAF2) 12.9
 LDTP06945  Sigma intracellular receptor 2 (TMEM97) 9.9
 LDTP15948  Transmembrane protein 126A (TMEM126A) 9.2
 LDTP14952  Mpv17-like protein 2 (MPV17L2) 6.8
 LDTP12210  Mitochondrial thiamine pyrophosphate carrier (SLC25A19) 3.7
 LDTP09502  Nuclear pore membrane glycoprotein 210 (NUP210) 3.4
 LDTP18053  Probable mitochondrial glutathione transporter SLC25A40 (SLC25A40) 3.4
 LDTP07477  Transmembrane protein 214 (TMEM214) 2.9
 LDTP02058  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (RPN2) 2.8
 LDTP05528  Apoptosis regulator BAX (BAX) 2.8
 LDTP02658  Cytochrome b-245 light chain (CYBA) 2.8
 LDTP05631  Bone marrow stromal antigen 2 (BST2) 2.8
 LDTP09579  Nuclear pore complex protein Nup133 (NUP133) 2.7
 LDTP10897  Nuclear pore complex protein Nup88 (NUP88) 2.6
 LDTP03061  Cation-dependent mannose-6-phosphate receptor (M6PR) 2.4
 LDTP01969  Transferrin receptor protein 1 (TFRC) 2.3
 LDTP03810  ATP synthase subunit gamma, mitochondrial (ATP5F1C) 2.3
 LDTP11213  Nucleoporin NDC1 (NDC1) 2.2
 LDTP06462  Neutral amino acid transporter B(0) (SLC1A5) 2.1
 LDTP13824  Voltage-dependent anion-selective channel protein 3 (VDAC3) 2.1
 LDTP05780  Syntaxin-5 (STX5) 2.0
Transcription factor
Click to Show/Hide to Show 1 Protein Related to This Bioclass
Target ID Target Name Binding Ratio
 LDTP06354  Interferon regulatory factor 4 (IRF4) 2.8
Immunoglobulin
Click to Show/Hide to Show 1 Protein Related to This Bioclass
Target ID Target Name Binding Ratio
 LDTP12387  SLAM family member 7 (SLAMF7) 3.0
Cytokine and receptor
Click to Show/Hide to Show 1 Protein Related to This Bioclass
Target ID Target Name Binding Ratio
 LDTP03659  CD70 antigen (CD70) 2.4
Other
Click to Show/Hide to Show 51 Protein Related to This Bioclass
Target ID Target Name Binding Ratio
 LDTP13800  Proteasome maturation protein (POMP) 35.4
 LDTP14139  Origin recognition complex subunit 6 (ORC6) 25.7
 LDTP04038  Melanoma-associated antigen 1 (MAGEA1) 10.7
 LDTP03527  G1/S-specific cyclin-D2 (CCND2) 8.3
 LDTP18373  Thioredoxin-related transmembrane protein 4 (TMX4) 6.3
 LDTP19831  Protein THEM6 (THEM6) 5.9
 LDTP10584  Junctional sarcoplasmic reticulum protein 1 (JSRP1) 5.7
 LDTP01379  Ribosomal L1 domain-containing protein 1 (RSL1D1) 5.3
 LDTP12755  OCIA domain-containing protein 1 (OCIAD1) 5.3
 LDTP15395  Cell cycle exit and neuronal differentiation protein 1 (CEND1) 5.0
 LDTP11324  RNA-binding protein 4 (RBM4) 4.9
 LDTP07205  Telomere-associated protein RIF1 (RIF1) 4.5
 LDTP12506  DNA polymerase epsilon subunit 3 (POLE3) 4.2
 LDTP16080  Protein FAM114A2 (FAM114A2) 4.2
 LDTP13338  Vacuolar protein sorting-associated protein 51 homolog (VPS51) 3.9
 LDTP07521  Enhancer of mRNA-decapping protein 4 (EDC4) 3.6
 LDTP09587  Protein BRICK1 (BRK1) 3.6
 LDTP10353  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 (SMARCD1) 3.5
 LDTP09787  Nicastrin (NCSTN) 3.4
 LDTP00691  TELO2-interacting protein 1 homolog (TTI1) 3.3
 LDTP10091  Pre-B-cell leukemia transcription factor-interacting protein 1 (PBXIP1) 3.2
 LDTP05922  Dynactin subunit 2 (DCTN2) 3.2
 LDTP06412  Telomeric repeat-binding factor 2 (TERF2) 3.1
 LDTP01021  Perilipin-3 (PLIN3) 3.1
 LDTP13094  Tuftelin-interacting protein 11 (TFIP11) 3.0
 LDTP13657  Melanoma-associated antigen D2 (MAGED2) 3.0
 LDTP11766  Activating signal cointegrator 1 complex subunit 2 (ASCC2) 2.8
 LDTP01522  Reticulon-3 (RTN3) 2.8
 LDTP06915  Borealin (CDCA8) 2.6
 LDTP10700  KH domain-containing RNA-binding protein QKI (QKI) 2.5
 LDTP15253  HEAT repeat-containing protein 3 (HEATR3) 2.5
 LDTP00517  U2 snRNP-associated SURP motif-containing protein (U2SURP) 2.5
 LDTP13701  Serine/threonine-protein phosphatase 6 regulatory subunit 1 (PPP6R1) 2.5
 LDTP02302  Small ribosomal subunit protein eS17 (RPS17) 2.4
 LDTP04514  Heterogeneous nuclear ribonucleoprotein F (HNRNPF) 2.4
 LDTP10914  Translin-associated protein X (TSNAX) 2.4
 LDTP06954  Nucleolar MIF4G domain-containing protein 1 (NOM1) 2.3
 LDTP12680  Fanconi anemia group I protein (FANCI) 2.3
 LDTP07401  Ragulator complex protein LAMTOR1 (LAMTOR1) 2.2
 LDTP06109  Guanine nucleotide-binding protein subunit alpha-13 (GNA13) 2.2
 LDTP04729  Ribosomal RNA processing protein 1 homolog A (RRP1) 2.2
 LDTP06809  Tubulin beta-8 chain (TUBB8) 2.1
 LDTP05867  Treacle protein (TCOF1) 2.1
 LDTP00431  Kinetochore protein NDC80 homolog (NDC80) 2.1
 LDTP13913  Inner nuclear membrane protein Man1 (LEMD3) 2.1
 LDTP05257  Receptor expression-enhancing protein 5 (REEP5) 2.1
 LDTP05898  Sequestosome-1 (SQSTM1) 2.1
 LDTP14980  RRP12-like protein (RRP12) 2.1
 LDTP08359  Condensin-2 complex subunit G2 (NCAPG2) 2.0
 LDTP03841  Hippocalcin-like protein 1 (HPCAL1) 2.0
 LDTP06366  Poly(rC)-binding protein 1 (PCBP1) 2.0

References

1 Physical and Functional Analysis of the Putative Rpn13 Inhibitor RA190. Cell Chem Biol. 2020 Nov 19;27(11):1371-1382.e6. doi: 10.1016/j.chembiol.2020.08.007. Epub 2020 Aug 27.