General Information of Target

Target ID LDTP04801
Target Name Gasdermin-D (GSDMD)
Gene Name GSDMD
Gene ID 79792
Synonyms
DFNA5L; GSDMDC1; Gasdermin-D; Gasdermin domain-containing protein 1) [Cleaved into: Gasdermin-D, N-terminal; GSDMD-NT; hGSDMD-NTD; Gasdermin-D, C-terminal; GSDMD-CT; hGSDMD-CTD; Gasdermin-D, p13; Gasdermin-D, 13 kDa; 13 kDa GSDMD; Gasdermin-D, p40]
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
Sequence
MGSAFERVVRRVVQELDHGGEFIPVTSLQSSTGFQPYCLVVRKPSSSWFWKPRYKCVNLS
IKDILEPDAAEPDVQRGRSFHFYDAMDGQIQGSVELAAPGQAKIAGGAAVSDSSSTSMNV
YSLSVDPNTWQTLLHERHLRQPEHKVLQQLRSRGDNVYVVTEVLQTQKEVEVTRTHKREG
SGRFSLPGATCLQGEGQGHLSQKKTVTIPSGSTLAFRVAQLVIDSDLDVLLFPDKKQRTF
QPPATGHKRSTSEGAWPQLPSGLSMMRCLHNFLTDGVPAEGAFTEDFQGLRAEVETISKE
LELLDRELCQLLLEGLEGVLRDQLALRALEEALEQGQSLGPVEPLDGPAGAVLECLVLSS
GMLVPELAIPVVYLLGALTMLSETQHKLLAEALESQTLLGPLELVGSLLEQSAPWQERST
MSLPPGLLGNSWGEGAPAWVLLDECGLELGEDTPHVCWEPQAQGRMCALYASLALLSGLS
QEPH
Target Bioclass
Transporter and channel
Family
Gasdermin family
Subcellular location
Cytoplasm, cytosol; Cell membrane
Function
[Gasdermin-D]: Precursor of a pore-forming protein that plays a key role in host defense against pathogen infection and danger signals. This form constitutes the precursor of the pore-forming protein: upon cleavage, the released N-terminal moiety (Gasdermin-D, N-terminal) binds to membranes and forms pores, triggering pyroptosis.; [Gasdermin-D, N-terminal]: Promotes pyroptosis in response to microbial infection and danger signals . Produced by the cleavage of gasdermin-D by inflammatory caspases CASP1, CASP4 or CASP5 in response to canonical, as well as non-canonical (such as cytosolic LPS) inflammasome activators. After cleavage, moves to the plasma membrane where it strongly binds to inner leaflet lipids, including monophosphorylated phosphatidylinositols, such as phosphatidylinositol 4-phosphate, bisphosphorylated phosphatidylinositols, such as phosphatidylinositol (4,5)-bisphosphate, as well as phosphatidylinositol (3,4,5)-bisphosphate, and more weakly to phosphatidic acid and phosphatidylserine. Homooligomerizes within the membrane and forms pores of 10-15 nanometers (nm) of inner diameter, allowing the release of mature interleukin-1 (IL1B and IL18) and triggering pyroptosis. Gasdermin pores also allow the release of mature caspase-7 (CASP7). In some, but not all, cells types, pyroptosis is followed by pyroptotic cell death, which is caused by downstream activation of ninjurins (NINJ1 or NINJ2), which mediate membrane rupture (cytolysis). Also forms pores in the mitochondrial membrane, resulting in release of mitochondrial DNA (mtDNA) into the cytosol. Gasdermin-D, N-terminal released from pyroptotic cells into the extracellular milieu rapidly binds to and kills both Gram-negative and Gram-positive bacteria, without harming neighboring mammalian cells, as it does not disrupt the plasma membrane from the outside due to lipid-binding specificity. Under cell culture conditions, also active against intracellular bacteria, such as Listeria monocytogenes. Also active in response to MAP3K7/TAK1 inactivation by Yersinia toxin YopJ, which triggers cleavage by CASP8 and subsequent activation. Strongly binds to bacterial and mitochondrial lipids, including cardiolipin. Does not bind to unphosphorylated phosphatidylinositol, phosphatidylethanolamine nor phosphatidylcholine.; [Gasdermin-D, p13]: Transcription coactivator produced by the cleavage by CASP3 or CASP7 in the upper small intestine in response to dietary antigens. Required to maintain food tolerance in small intestine: translocates to the nucleus and acts as a coactivator for STAT1 to induce the transcription of CIITA and MHC class II molecules, which in turn induce type 1 regulatory T (Tr1) cells in upper small intestine.; [Gasdermin-D, p40]: Produced by the cleavage by papain allergen. After cleavage, moves to the plasma membrane and homooligomerizes within the membrane and forms pores of 10-15 nanometers (nm) of inner diameter, allowing the specific release of mature interleukin-33 (IL33), promoting type 2 inflammatory immune response.
Uniprot ID
P57764
Ensemble ID
ENST00000262580.9
HGNC ID
HGNC:25697
ChEMBL ID
CHEMBL4523247

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 14 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
STPyne
 Probe Info 
K204(6.62); K43(5.68)  LDD0277  [1]
BTD
 Probe Info 
C56(0.95)  LDD2093  [2]
Sulforaphane-probe2
 Probe Info 
2.90  LDD0160  [3]
AHL-Pu-1
 Probe Info 
C268(2.18)  LDD0171  [4]
EA-probe
 Probe Info 
C268(1.21)  LDD2210  [5]
DBIA
 Probe Info 
C268(1.10); C56(1.18)  LDD0531  [6]
4-Iodoacetamidophenylacetylene
 Probe Info 
C268(0.00); C309(0.00); C467(0.00); C38(0.00)  LDD0038  [7]
IA-alkyne
 Probe Info 
C268(0.00); C56(0.00); C309(0.00); C191(0.00)  LDD0036  [7]
IPIAA_L
 Probe Info 
N.A.  LDD0031  [8]
Lodoacetamide azide
 Probe Info 
C268(0.00); C56(0.00); C309(0.00); C191(0.00)  LDD0037  [7]
NAIA_4
 Probe Info 
C56(0.00); C191(0.00); C268(0.00)  LDD2226  [9]
Compound 10
 Probe Info 
C191(0.00); C268(0.00)  LDD2216  [10]
Compound 11
 Probe Info 
N.A.  LDD2213  [10]
IPM
 Probe Info 
C268(0.00); C191(0.00)  LDD0147  [11]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0558  2-Cyano-N-phenylacetamide MDA-MB-231 C56(1.22); C191(1.09)  LDD2152  [2]
 LDCM0026  4SU-RNA+native RNA DM93 C268(2.18)  LDD0171  [4]
 LDCM0214  AC1 HCT 116 C268(1.10); C56(1.18)  LDD0531  [6]
 LDCM0215  AC10 HCT 116 C268(1.12); C56(1.01)  LDD0532  [6]
 LDCM0216  AC100 HCT 116 C268(0.98); C56(1.10)  LDD0533  [6]
 LDCM0217  AC101 HCT 116 C268(0.98); C56(0.99)  LDD0534  [6]
 LDCM0218  AC102 HCT 116 C268(0.99); C56(0.92)  LDD0535  [6]
 LDCM0219  AC103 HCT 116 C268(1.10); C56(1.08)  LDD0536  [6]
 LDCM0220  AC104 HCT 116 C268(1.08); C56(0.95)  LDD0537  [6]
 LDCM0221  AC105 HCT 116 C268(0.94); C56(1.03)  LDD0538  [6]
 LDCM0222  AC106 HCT 116 C268(1.12); C56(1.11)  LDD0539  [6]
 LDCM0223  AC107 HCT 116 C268(0.86); C56(0.95)  LDD0540  [6]
 LDCM0224  AC108 HCT 116 C268(1.07); C56(1.57)  LDD0541  [6]
 LDCM0225  AC109 HCT 116 C268(0.98); C56(1.40)  LDD0542  [6]
 LDCM0226  AC11 HCT 116 C268(1.10); C56(1.10)  LDD0543  [6]
 LDCM0227  AC110 HCT 116 C268(1.07); C56(1.66)  LDD0544  [6]
 LDCM0228  AC111 HCT 116 C268(1.24); C56(1.38)  LDD0545  [6]
 LDCM0229  AC112 HCT 116 C268(1.01); C56(1.05)  LDD0546  [6]
 LDCM0230  AC113 HCT 116 C268(1.05); C56(1.11)  LDD0547  [6]
 LDCM0231  AC114 HCT 116 C268(1.17); C56(1.13)  LDD0548  [6]
 LDCM0232  AC115 HCT 116 C268(1.28); C56(1.06)  LDD0549  [6]
 LDCM0233  AC116 HCT 116 C268(1.44); C56(1.02)  LDD0550  [6]
 LDCM0234  AC117 HCT 116 C268(1.12); C56(1.23)  LDD0551  [6]
 LDCM0235  AC118 HCT 116 C268(1.21); C56(1.13)  LDD0552  [6]
 LDCM0236  AC119 HCT 116 C268(1.22); C56(1.07)  LDD0553  [6]
 LDCM0237  AC12 HCT 116 C268(1.03); C56(1.00)  LDD0554  [6]
 LDCM0238  AC120 HCT 116 C268(1.12); C56(0.86)  LDD0555  [6]
 LDCM0239  AC121 HCT 116 C268(1.37); C56(1.34)  LDD0556  [6]
 LDCM0240  AC122 HCT 116 C268(1.14); C56(0.90)  LDD0557  [6]
 LDCM0241  AC123 HCT 116 C268(1.02); C56(1.16)  LDD0558  [6]
 LDCM0242  AC124 HCT 116 C268(1.14); C56(0.93)  LDD0559  [6]
 LDCM0243  AC125 HCT 116 C268(1.15); C56(1.04)  LDD0560  [6]
 LDCM0244  AC126 HCT 116 C268(1.34); C56(1.14)  LDD0561  [6]
 LDCM0245  AC127 HCT 116 C268(1.40); C56(1.26)  LDD0562  [6]
 LDCM0246  AC128 HCT 116 C56(1.00)  LDD0563  [6]
 LDCM0247  AC129 HCT 116 C56(0.90)  LDD0564  [6]
 LDCM0249  AC130 HCT 116 C56(1.02)  LDD0566  [6]
 LDCM0250  AC131 HCT 116 C56(0.93)  LDD0567  [6]
 LDCM0251  AC132 HCT 116 C56(0.99)  LDD0568  [6]
 LDCM0252  AC133 HCT 116 C56(0.97)  LDD0569  [6]
 LDCM0253  AC134 HCT 116 C56(1.01)  LDD0570  [6]
 LDCM0254  AC135 HCT 116 C56(1.08)  LDD0571  [6]
 LDCM0255  AC136 HCT 116 C56(1.01)  LDD0572  [6]
 LDCM0256  AC137 HCT 116 C56(0.98)  LDD0573  [6]
 LDCM0257  AC138 HCT 116 C56(1.09)  LDD0574  [6]
 LDCM0258  AC139 HCT 116 C56(1.09)  LDD0575  [6]
 LDCM0259  AC14 HCT 116 C268(0.89); C56(0.88)  LDD0576  [6]
 LDCM0260  AC140 HCT 116 C56(0.99)  LDD0577  [6]
 LDCM0261  AC141 HCT 116 C56(1.12)  LDD0578  [6]
 LDCM0262  AC142 HCT 116 C56(0.97)  LDD0579  [6]
 LDCM0263  AC143 HCT 116 C56(0.97)  LDD0580  [6]
 LDCM0264  AC144 HCT 116 C56(1.01)  LDD0581  [6]
 LDCM0265  AC145 HCT 116 C56(1.03)  LDD0582  [6]
 LDCM0266  AC146 HCT 116 C56(0.98)  LDD0583  [6]
 LDCM0267  AC147 HCT 116 C56(1.00)  LDD0584  [6]
 LDCM0268  AC148 HCT 116 C56(1.10)  LDD0585  [6]
 LDCM0269  AC149 HCT 116 C56(1.13)  LDD0586  [6]
 LDCM0270  AC15 HCT 116 C268(0.94); C56(1.14)  LDD0587  [6]
 LDCM0271  AC150 HCT 116 C56(1.05)  LDD0588  [6]
 LDCM0272  AC151 HCT 116 C56(1.05)  LDD0589  [6]
 LDCM0273  AC152 HCT 116 C56(1.05)  LDD0590  [6]
 LDCM0274  AC153 HCT 116 C56(1.10)  LDD0591  [6]
 LDCM0621  AC154 HCT 116 C56(1.06)  LDD2158  [6]
 LDCM0622  AC155 HCT 116 C56(1.09)  LDD2159  [6]
 LDCM0623  AC156 HCT 116 C56(0.99)  LDD2160  [6]
 LDCM0624  AC157 HCT 116 C56(0.98)  LDD2161  [6]
 LDCM0276  AC17 HCT 116 C56(1.00); C268(1.11)  LDD0593  [6]
 LDCM0277  AC18 HCT 116 C56(0.89); C268(1.18)  LDD0594  [6]
 LDCM0278  AC19 HCT 116 C56(0.89); C268(1.23)  LDD0595  [6]
 LDCM0279  AC2 HCT 116 C56(1.20); C268(1.21)  LDD0596  [6]
 LDCM0280  AC20 HCT 116 C56(1.10); C268(1.14)  LDD0597  [6]
 LDCM0281  AC21 HCT 116 C56(1.02); C268(1.47)  LDD0598  [6]
 LDCM0282  AC22 HCT 116 C56(1.02); C268(1.29)  LDD0599  [6]
 LDCM0283  AC23 HCT 116 C56(1.01); C268(1.06)  LDD0600  [6]
 LDCM0284  AC24 HCT 116 C56(0.95); C268(0.96)  LDD0601  [6]
 LDCM0285  AC25 HCT 116 C56(1.11); C268(1.11)  LDD0602  [6]
 LDCM0286  AC26 HCT 116 C56(1.08); C268(1.46)  LDD0603  [6]
 LDCM0287  AC27 HCT 116 C56(1.16); C268(1.57)  LDD0604  [6]
 LDCM0288  AC28 HCT 116 C56(1.16); C268(1.38)  LDD0605  [6]
 LDCM0289  AC29 HCT 116 C56(1.21); C268(1.28)  LDD0606  [6]
 LDCM0290  AC3 HCT 116 C56(1.11); C268(1.19)  LDD0607  [6]
 LDCM0291  AC30 HCT 116 C56(1.13); C268(1.25)  LDD0608  [6]
 LDCM0292  AC31 HCT 116 C56(1.03); C268(1.38)  LDD0609  [6]
 LDCM0293  AC32 HCT 116 C56(1.18); C268(1.73)  LDD0610  [6]
 LDCM0294  AC33 HCT 116 C56(1.12); C268(1.34)  LDD0611  [6]
 LDCM0295  AC34 HCT 116 C56(1.27); C268(1.90)  LDD0612  [6]
 LDCM0296  AC35 HCT 116 C268(1.10); C56(1.14)  LDD0613  [6]
 LDCM0297  AC36 HCT 116 C268(0.81); C56(1.08)  LDD0614  [6]
 LDCM0298  AC37 HCT 116 C268(0.79); C56(1.01)  LDD0615  [6]
 LDCM0299  AC38 HCT 116 C268(0.86); C56(1.06)  LDD0616  [6]
 LDCM0300  AC39 HCT 116 C56(1.15); C268(1.20)  LDD0617  [6]
 LDCM0301  AC4 HCT 116 C56(1.05); C268(1.25)  LDD0618  [6]
 LDCM0302  AC40 HCT 116 C268(1.04); C56(1.13)  LDD0619  [6]
 LDCM0303  AC41 HCT 116 C268(0.95); C56(1.02)  LDD0620  [6]
 LDCM0304  AC42 HCT 116 C56(1.00); C268(1.04)  LDD0621  [6]
 LDCM0305  AC43 HCT 116 C56(1.01); C268(1.02)  LDD0622  [6]
 LDCM0306  AC44 HCT 116 C268(0.99); C56(1.09)  LDD0623  [6]
 LDCM0307  AC45 HCT 116 C268(1.08); C56(1.17)  LDD0624  [6]
 LDCM0308  AC46 HCT 116 C56(1.07); C268(1.15)  LDD0625  [6]
 LDCM0309  AC47 HCT 116 C56(0.98); C268(1.28)  LDD0626  [6]
 LDCM0310  AC48 HCT 116 C56(0.96); C268(1.11)  LDD0627  [6]
 LDCM0311  AC49 HCT 116 C56(1.01); C268(1.53)  LDD0628  [6]
 LDCM0312  AC5 HCT 116 C56(1.11); C268(1.34)  LDD0629  [6]
 LDCM0313  AC50 HCT 116 C56(1.03); C268(1.32)  LDD0630  [6]
 LDCM0314  AC51 HCT 116 C56(1.02); C268(1.03)  LDD0631  [6]
 LDCM0315  AC52 HCT 116 C56(1.11); C268(1.11)  LDD0632  [6]
 LDCM0316  AC53 HCT 116 C56(1.14); C268(1.57)  LDD0633  [6]
 LDCM0317  AC54 HCT 116 C56(1.17); C268(1.22)  LDD0634  [6]
 LDCM0318  AC55 HCT 116 C56(1.15); C268(1.29)  LDD0635  [6]
 LDCM0319  AC56 HCT 116 C56(1.10); C268(1.65)  LDD0636  [6]
 LDCM0320  AC57 HCT 116 C56(1.03); C268(1.09)  LDD0637  [6]
 LDCM0321  AC58 HCT 116 C56(0.92); C268(0.96)  LDD0638  [6]
 LDCM0322  AC59 HCT 116 C56(0.92); C268(1.25)  LDD0639  [6]
 LDCM0323  AC6 HCT 116 C56(0.90); C268(1.21)  LDD0640  [6]
 LDCM0324  AC60 HCT 116 C56(0.87); C268(1.18)  LDD0641  [6]
 LDCM0325  AC61 HCT 116 C56(0.99); C268(1.01)  LDD0642  [6]
 LDCM0326  AC62 HCT 116 C56(0.88); C268(1.15)  LDD0643  [6]
 LDCM0327  AC63 HCT 116 C56(0.95); C268(1.34)  LDD0644  [6]
 LDCM0328  AC64 HCT 116 C56(0.95); C268(1.33)  LDD0645  [6]
 LDCM0329  AC65 HCT 116 C56(0.83); C268(1.15)  LDD0646  [6]
 LDCM0330  AC66 HCT 116 C56(0.82); C268(1.05)  LDD0647  [6]
 LDCM0331  AC67 HCT 116 C56(0.84); C268(1.18)  LDD0648  [6]
 LDCM0332  AC68 HCT 116 C268(1.02); C56(1.02)  LDD0649  [6]
 LDCM0333  AC69 HCT 116 C268(0.98); C56(1.00)  LDD0650  [6]
 LDCM0334  AC7 HCT 116 C56(0.86); C268(1.34)  LDD0651  [6]
 LDCM0335  AC70 HCT 116 C56(1.08); C268(1.31)  LDD0652  [6]
 LDCM0336  AC71 HCT 116 C268(0.90); C56(1.17)  LDD0653  [6]
 LDCM0337  AC72 HCT 116 C56(0.99); C268(1.16)  LDD0654  [6]
 LDCM0338  AC73 HCT 116 C268(1.40); C56(1.44)  LDD0655  [6]
 LDCM0339  AC74 HCT 116 C268(1.49); C56(1.50)  LDD0656  [6]
 LDCM0340  AC75 HCT 116 C268(1.43); C56(1.46)  LDD0657  [6]
 LDCM0341  AC76 HCT 116 C268(1.24); C56(1.29)  LDD0658  [6]
 LDCM0342  AC77 HCT 116 C268(1.22); C56(1.27)  LDD0659  [6]
 LDCM0343  AC78 HCT 116 C268(1.12); C56(1.21)  LDD0660  [6]
 LDCM0344  AC79 HCT 116 C56(1.05); C268(1.06)  LDD0661  [6]
 LDCM0345  AC8 HCT 116 C56(1.03); C268(1.22)  LDD0662  [6]
 LDCM0346  AC80 HCT 116 C268(1.05); C56(1.20)  LDD0663  [6]
 LDCM0347  AC81 HCT 116 C268(1.01); C56(1.24)  LDD0664  [6]
 LDCM0348  AC82 HCT 116 C268(1.46); C56(1.67)  LDD0665  [6]
 LDCM0349  AC83 HCT 116 C268(1.24); C56(1.32)  LDD0666  [6]
 LDCM0350  AC84 HCT 116 C268(1.09); C56(1.28)  LDD0667  [6]
 LDCM0351  AC85 HCT 116 C56(1.20); C268(1.24)  LDD0668  [6]
 LDCM0352  AC86 HCT 116 C56(1.19); C268(1.26)  LDD0669  [6]
 LDCM0353  AC87 HCT 116 C268(1.04); C56(1.12)  LDD0670  [6]
 LDCM0354  AC88 HCT 116 C268(1.12); C56(1.23)  LDD0671  [6]
 LDCM0355  AC89 HCT 116 C268(1.10); C56(1.25)  LDD0672  [6]
 LDCM0357  AC90 HCT 116 C268(1.21); C56(1.25)  LDD0674  [6]
 LDCM0358  AC91 HCT 116 C268(1.20); C56(1.25)  LDD0675  [6]
 LDCM0359  AC92 HCT 116 C268(1.16); C56(1.30)  LDD0676  [6]
 LDCM0360  AC93 HCT 116 C268(1.18); C56(1.20)  LDD0677  [6]
 LDCM0361  AC94 HCT 116 C56(1.04); C268(1.21)  LDD0678  [6]
 LDCM0362  AC95 HCT 116 C268(1.12); C56(1.17)  LDD0679  [6]
 LDCM0363  AC96 HCT 116 C56(1.08); C268(1.42)  LDD0680  [6]
 LDCM0364  AC97 HCT 116 C56(1.32); C268(1.43)  LDD0681  [6]
 LDCM0365  AC98 HCT 116 C56(1.06); C268(1.20)  LDD0682  [6]
 LDCM0366  AC99 HCT 116 C268(0.97); C56(1.01)  LDD0683  [6]
 LDCM0248  AKOS034007472 HCT 116 C268(1.05); C56(1.16)  LDD0565  [6]
 LDCM0356  AKOS034007680 HCT 116 C56(0.96); C268(1.08)  LDD0673  [6]
 LDCM0275  AKOS034007705 HCT 116 C268(1.16); C56(1.19)  LDD0592  [6]
 LDCM0367  CL1 HCT 116 C56(1.05); C268(1.29)  LDD0684  [6]
 LDCM0368  CL10 HCT 116 C56(0.98); C268(2.53)  LDD0685  [6]
 LDCM0369  CL100 HCT 116 C56(1.20); C268(1.38)  LDD0686  [6]
 LDCM0370  CL101 HCT 116 C56(0.82); C268(1.19)  LDD0687  [6]
 LDCM0371  CL102 HCT 116 C56(0.77); C268(3.82)  LDD0688  [6]
 LDCM0372  CL103 HCT 116 C56(0.89); C268(2.11)  LDD0689  [6]
 LDCM0373  CL104 HCT 116 C56(1.00); C268(3.08)  LDD0690  [6]
 LDCM0374  CL105 HCT 116 C56(1.02); C268(1.87)  LDD0691  [6]
 LDCM0375  CL106 HCT 116 C56(0.96); C268(1.27)  LDD0692  [6]
 LDCM0376  CL107 HCT 116 C56(0.93); C268(1.34)  LDD0693  [6]
 LDCM0377  CL108 HCT 116 C56(0.92); C268(1.53)  LDD0694  [6]
 LDCM0378  CL109 HCT 116 C56(1.03); C268(2.40)  LDD0695  [6]
 LDCM0379  CL11 HCT 116 C56(1.00); C268(2.07)  LDD0696  [6]
 LDCM0380  CL110 HCT 116 C56(0.92); C268(1.67)  LDD0697  [6]
 LDCM0381  CL111 HCT 116 C56(0.85); C268(1.58)  LDD0698  [6]
 LDCM0382  CL112 HCT 116 C56(1.02); C268(1.25)  LDD0699  [6]
 LDCM0383  CL113 HCT 116 C56(1.16); C268(1.59)  LDD0700  [6]
 LDCM0384  CL114 HCT 116 C56(1.12); C268(2.02)  LDD0701  [6]
 LDCM0385  CL115 HCT 116 C56(1.13); C268(1.55)  LDD0702  [6]
 LDCM0386  CL116 HCT 116 C56(1.17); C268(1.46)  LDD0703  [6]
 LDCM0387  CL117 HCT 116 C56(1.11); C268(1.55)  LDD0704  [6]
 LDCM0388  CL118 HCT 116 C56(1.10); C268(1.27)  LDD0705  [6]
 LDCM0389  CL119 HCT 116 C268(0.99); C56(1.07)  LDD0706  [6]
 LDCM0390  CL12 HCT 116 C56(0.99); C268(2.13)  LDD0707  [6]
 LDCM0391  CL120 HCT 116 C268(1.09); C56(1.18)  LDD0708  [6]
 LDCM0392  CL121 HCT 116 C56(0.98); C268(1.44)  LDD0709  [6]
 LDCM0393  CL122 HCT 116 C56(1.10); C268(1.44)  LDD0710  [6]
 LDCM0394  CL123 HCT 116 C56(0.95); C268(2.98)  LDD0711  [6]
 LDCM0395  CL124 HCT 116 C56(1.01); C268(1.68)  LDD0712  [6]
 LDCM0396  CL125 HCT 116 C268(1.13); C56(1.31)  LDD0713  [6]
 LDCM0397  CL126 HCT 116 C56(1.14); C268(1.36)  LDD0714  [6]
 LDCM0398  CL127 HCT 116 C56(0.95); C268(1.08)  LDD0715  [6]
 LDCM0399  CL128 HCT 116 C56(0.93); C268(1.04)  LDD0716  [6]
 LDCM0400  CL13 HCT 116 C56(0.94); C268(1.45)  LDD0717  [6]
 LDCM0401  CL14 HCT 116 C56(0.98); C268(1.57)  LDD0718  [6]
 LDCM0402  CL15 HCT 116 C56(0.96); C268(2.47)  LDD0719  [6]
 LDCM0403  CL16 HCT 116 C56(0.91); C268(1.08)  LDD0720  [6]
 LDCM0404  CL17 HCT 116 C56(0.71); C268(3.16)  LDD0721  [6]
 LDCM0405  CL18 HCT 116 C56(0.78); C268(1.12)  LDD0722  [6]
 LDCM0406  CL19 HCT 116 C56(0.67); C268(1.19)  LDD0723  [6]
 LDCM0407  CL2 HCT 116 C56(1.10); C268(1.11)  LDD0724  [6]
 LDCM0408  CL20 HCT 116 C56(0.76); C268(1.31)  LDD0725  [6]
 LDCM0409  CL21 HCT 116 C56(0.80); C268(3.90)  LDD0726  [6]
 LDCM0410  CL22 HCT 116 C56(1.16); C268(2.08)  LDD0727  [6]
 LDCM0411  CL23 HCT 116 C56(0.88); C268(1.15)  LDD0728  [6]
 LDCM0412  CL24 HCT 116 C56(0.83); C268(1.35)  LDD0729  [6]
 LDCM0413  CL25 HCT 116 C268(2.27); C56(0.73)  LDD0730  [6]
 LDCM0414  CL26 HCT 116 C268(1.06); C56(0.83)  LDD0731  [6]
 LDCM0415  CL27 HCT 116 C268(1.33); C56(0.82)  LDD0732  [6]
 LDCM0416  CL28 HCT 116 C268(1.53); C56(0.77)  LDD0733  [6]
 LDCM0417  CL29 HCT 116 C268(1.26); C56(0.90)  LDD0734  [6]
 LDCM0418  CL3 HCT 116 C268(1.38); C56(0.98)  LDD0735  [6]
 LDCM0419  CL30 HCT 116 C268(1.12); C56(0.80)  LDD0736  [6]
 LDCM0420  CL31 HCT 116 C268(1.24); C56(1.00)  LDD0737  [6]
 LDCM0421  CL32 HCT 116 C268(1.20); C56(1.07)  LDD0738  [6]
 LDCM0422  CL33 HCT 116 C268(3.80); C56(0.95)  LDD0739  [6]
 LDCM0423  CL34 HCT 116 C268(1.97); C56(0.99)  LDD0740  [6]
 LDCM0424  CL35 HCT 116 C268(1.40); C56(0.95)  LDD0741  [6]
 LDCM0425  CL36 HCT 116 C268(1.50); C56(0.90)  LDD0742  [6]
 LDCM0426  CL37 HCT 116 C268(1.82); C56(1.00)  LDD0743  [6]
 LDCM0428  CL39 HCT 116 C268(1.54); C56(1.11)  LDD0745  [6]
 LDCM0429  CL4 HCT 116 C268(1.07); C56(0.92)  LDD0746  [6]
 LDCM0430  CL40 HCT 116 C268(1.85); C56(1.08)  LDD0747  [6]
 LDCM0431  CL41 HCT 116 C268(1.42); C56(1.07)  LDD0748  [6]
 LDCM0432  CL42 HCT 116 C268(3.10); C56(1.03)  LDD0749  [6]
 LDCM0433  CL43 HCT 116 C268(1.51); C56(1.08)  LDD0750  [6]
 LDCM0434  CL44 HCT 116 C268(1.61); C56(1.01)  LDD0751  [6]
 LDCM0435  CL45 HCT 116 C268(2.45); C56(1.01)  LDD0752  [6]
 LDCM0436  CL46 HCT 116 C268(1.22); C56(1.03)  LDD0753  [6]
 LDCM0437  CL47 HCT 116 C268(1.26); C56(1.02)  LDD0754  [6]
 LDCM0438  CL48 HCT 116 C268(1.25); C56(1.00)  LDD0755  [6]
 LDCM0439  CL49 HCT 116 C268(1.13); C56(1.02)  LDD0756  [6]
 LDCM0440  CL5 HCT 116 C268(0.99); C56(0.97)  LDD0757  [6]
 LDCM0441  CL50 HCT 116 C268(2.47); C56(1.05)  LDD0758  [6]
 LDCM0442  CL51 HCT 116 C268(2.38); C56(1.04)  LDD0759  [6]
 LDCM0443  CL52 HCT 116 C268(1.28); C56(1.03)  LDD0760  [6]
 LDCM0444  CL53 HCT 116 C268(1.43); C56(0.99)  LDD0761  [6]
 LDCM0445  CL54 HCT 116 C268(1.18); C56(0.96)  LDD0762  [6]
 LDCM0446  CL55 HCT 116 C268(1.09); C56(1.02)  LDD0763  [6]
 LDCM0447  CL56 HCT 116 C268(1.10); C56(0.98)  LDD0764  [6]
 LDCM0448  CL57 HCT 116 C268(1.52); C56(0.95)  LDD0765  [6]
 LDCM0449  CL58 HCT 116 C268(1.11); C56(0.98)  LDD0766  [6]
 LDCM0450  CL59 HCT 116 C268(1.07); C56(0.97)  LDD0767  [6]
 LDCM0451  CL6 HCT 116 C268(1.77); C56(0.91)  LDD0768  [6]
 LDCM0452  CL60 HCT 116 C268(1.28); C56(1.02)  LDD0769  [6]
 LDCM0453  CL61 HCT 116 C268(1.16); C56(1.10)  LDD0770  [6]
 LDCM0454  CL62 HCT 116 C268(1.17); C56(1.11)  LDD0771  [6]
 LDCM0455  CL63 HCT 116 C268(2.95); C56(1.08)  LDD0772  [6]
 LDCM0456  CL64 HCT 116 C268(3.58); C56(1.09)  LDD0773  [6]
 LDCM0457  CL65 HCT 116 C268(1.19); C56(0.97)  LDD0774  [6]
 LDCM0458  CL66 HCT 116 C268(1.61); C56(1.11)  LDD0775  [6]
 LDCM0459  CL67 HCT 116 C268(1.18); C56(1.18)  LDD0776  [6]
 LDCM0460  CL68 HCT 116 C268(1.46); C56(1.08)  LDD0777  [6]
 LDCM0461  CL69 HCT 116 C268(1.44); C56(1.08)  LDD0778  [6]
 LDCM0462  CL7 HCT 116 C268(1.32); C56(0.96)  LDD0779  [6]
 LDCM0463  CL70 HCT 116 C268(1.25); C56(0.96)  LDD0780  [6]
 LDCM0464  CL71 HCT 116 C268(1.40); C56(1.09)  LDD0781  [6]
 LDCM0465  CL72 HCT 116 C268(1.22); C56(1.36)  LDD0782  [6]
 LDCM0466  CL73 HCT 116 C268(1.78); C56(1.11)  LDD0783  [6]
 LDCM0467  CL74 HCT 116 C268(1.18); C56(1.18)  LDD0784  [6]
 LDCM0469  CL76 HCT 116 C268(1.10); C56(0.81)  LDD0786  [6]
 LDCM0470  CL77 HCT 116 C268(2.22); C56(0.80)  LDD0787  [6]
 LDCM0471  CL78 HCT 116 C268(1.19); C56(0.81)  LDD0788  [6]
 LDCM0472  CL79 HCT 116 C268(1.62); C56(0.90)  LDD0789  [6]
 LDCM0473  CL8 HCT 116 C268(6.81); C56(1.00)  LDD0790  [6]
 LDCM0474  CL80 HCT 116 C268(0.99); C56(0.94)  LDD0791  [6]
 LDCM0475  CL81 HCT 116 C268(1.34); C56(0.99)  LDD0792  [6]
 LDCM0476  CL82 HCT 116 C268(1.88); C56(0.96)  LDD0793  [6]
 LDCM0477  CL83 HCT 116 C268(2.04); C56(0.96)  LDD0794  [6]
 LDCM0478  CL84 HCT 116 C268(4.49); C56(0.83)  LDD0795  [6]
 LDCM0479  CL85 HCT 116 C268(1.36); C56(0.94)  LDD0796  [6]
 LDCM0480  CL86 HCT 116 C268(1.18); C56(0.92)  LDD0797  [6]
 LDCM0481  CL87 HCT 116 C268(1.51); C56(1.08)  LDD0798  [6]
 LDCM0482  CL88 HCT 116 C268(1.85); C56(1.04)  LDD0799  [6]
 LDCM0483  CL89 HCT 116 C268(2.91); C56(1.09)  LDD0800  [6]
 LDCM0484  CL9 HCT 116 C268(1.27); C56(1.01)  LDD0801  [6]
 LDCM0485  CL90 HCT 116 C268(2.40); C56(1.01)  LDD0802  [6]
 LDCM0486  CL91 HCT 116 C268(1.27); C56(1.01)  LDD0803  [6]
 LDCM0487  CL92 HCT 116 C268(1.28); C56(1.07)  LDD0804  [6]
 LDCM0488  CL93 HCT 116 C268(1.23); C56(1.06)  LDD0805  [6]
 LDCM0489  CL94 HCT 116 C268(1.78); C56(1.11)  LDD0806  [6]
 LDCM0490  CL95 HCT 116 C268(2.32); C56(0.99)  LDD0807  [6]
 LDCM0491  CL96 HCT 116 C268(1.59); C56(1.13)  LDD0808  [6]
 LDCM0492  CL97 HCT 116 C268(2.95); C56(1.05)  LDD0809  [6]
 LDCM0493  CL98 HCT 116 C268(1.40); C56(1.05)  LDD0810  [6]
 LDCM0494  CL99 HCT 116 C268(1.34); C56(1.15)  LDD0811  [6]
 LDCM0213  Electrophilic fragment 2 MDA-MB-231 C56(3.25); C191(2.61)  LDD1702  [2]
 LDCM0175  Ethacrynic acid HeLa C268(1.21)  LDD2210  [5]
 LDCM0204  EV-97 T cell C268(16.96)  LDD0525  [12]
 LDCM0625  F8 Ramos C191(1.16); C56(1.04); C268(0.70); C38(0.68)  LDD2187  [13]
 LDCM0572  Fragment10 MDA-MB-231 C268(6.98)  LDD1389  [14]
 LDCM0573  Fragment11 Ramos C268(2.24)  LDD1392  [14]
 LDCM0574  Fragment12 Ramos C268(2.00)  LDD1394  [14]
 LDCM0575  Fragment13 MDA-MB-231 C268(1.83)  LDD1395  [14]
 LDCM0576  Fragment14 MDA-MB-231 C268(1.82)  LDD1397  [14]
 LDCM0577  Fragment15 Ramos C268(3.04)  LDD1400  [14]
 LDCM0579  Fragment20 Ramos C268(12.22)  LDD1403  [14]
 LDCM0580  Fragment21 MDA-MB-231 C268(3.27)  LDD1404  [14]
 LDCM0581  Fragment22 MDA-MB-231 C268(1.21)  LDD1406  [14]
 LDCM0582  Fragment23 MDA-MB-231 C268(0.97)  LDD1408  [14]
 LDCM0583  Fragment24 Ramos C268(1.93)  LDD1410  [14]
 LDCM0584  Fragment25 MDA-MB-231 C268(1.10)  LDD1411  [14]
 LDCM0585  Fragment26 Ramos C268(0.98)  LDD1412  [14]
 LDCM0578  Fragment27 MDA-MB-231 C268(0.78)  LDD1401  [14]
 LDCM0586  Fragment28 MDA-MB-231 C268(1.13)  LDD1415  [14]
 LDCM0587  Fragment29 Ramos C268(0.84)  LDD1418  [14]
 LDCM0588  Fragment30 MDA-MB-231 C268(1.29)  LDD1419  [14]
 LDCM0589  Fragment31 Ramos C268(3.10)  LDD1478  [14]
 LDCM0590  Fragment32 MDA-MB-231 C268(3.13)  LDD1423  [14]
 LDCM0468  Fragment33 HCT 116 C268(1.46); C56(1.07)  LDD0785  [6]
 LDCM0592  Fragment34 MDA-MB-231 C268(1.04)  LDD1427  [14]
 LDCM0593  Fragment35 MDA-MB-231 C268(0.64)  LDD1429  [14]
 LDCM0595  Fragment37 Ramos C268(1.15)  LDD1432  [14]
 LDCM0596  Fragment38 MDA-MB-231 C268(1.16)  LDD1433  [14]
 LDCM0597  Fragment39 MDA-MB-231 C268(20.00)  LDD1435  [14]
 LDCM0566  Fragment4 MDA-MB-231 C268(2.88)  LDD1378  [14]
 LDCM0599  Fragment41 MDA-MB-231 C268(1.62)  LDD1438  [14]
 LDCM0600  Fragment42 Ramos C268(0.84)  LDD1440  [14]
 LDCM0601  Fragment43 Ramos C268(2.64)  LDD1442  [14]
 LDCM0602  Fragment44 MDA-MB-231 C268(0.78)  LDD1443  [14]
 LDCM0603  Fragment45 MDA-MB-231 C268(20.00)  LDD1444  [14]
 LDCM0604  Fragment46 MDA-MB-231 C268(0.78)  LDD1445  [14]
 LDCM0608  Fragment50 MDA-MB-231 C268(20.00)  LDD1449  [14]
 LDCM0427  Fragment51 HCT 116 C268(1.91); C56(1.03)  LDD0744  [6]
 LDCM0610  Fragment52 Ramos C268(1.31)  LDD1453  [14]
 LDCM0611  Fragment53 MDA-MB-231 C268(1.05)  LDD1454  [14]
 LDCM0612  Fragment54 MDA-MB-231 C268(1.02)  LDD1456  [14]
 LDCM0613  Fragment55 MDA-MB-231 C268(1.10)  LDD1457  [14]
 LDCM0614  Fragment56 MDA-MB-231 C268(1.02)  LDD1458  [14]
 LDCM0568  Fragment6 MDA-MB-231 C268(1.67)  LDD1382  [14]
 LDCM0569  Fragment7 Ramos C268(4.26)  LDD1384  [14]
 LDCM0570  Fragment8 Ramos C268(2.60)  LDD1386  [14]
 LDCM0571  Fragment9 MDA-MB-231 C268(2.84)  LDD1387  [14]
 LDCM0022  KB02 Ramos 4.96  LDD0431  [15]
 LDCM0023  KB03 MDA-MB-231 C268(12.35)  LDD1376  [14]
 LDCM0024  KB05 COLO792 C309(1.56)  LDD3310  [16]
 LDCM0169  KB63 Ramos 20.00  LDD0432  [15]
 LDCM0500  Nucleophilic fragment 13a MDA-MB-231 C56(0.95)  LDD2093  [2]
 LDCM0503  Nucleophilic fragment 14b MDA-MB-231 C191(0.64)  LDD2096  [2]
 LDCM0506  Nucleophilic fragment 16a MDA-MB-231 C56(0.85); C191(0.86)  LDD2099  [2]
 LDCM0514  Nucleophilic fragment 20a MDA-MB-231 C56(1.02); C191(1.06)  LDD2107  [2]
 LDCM0516  Nucleophilic fragment 21a MDA-MB-231 C56(0.93); C191(0.91)  LDD2109  [2]
 LDCM0518  Nucleophilic fragment 22a MDA-MB-231 C191(0.96)  LDD2111  [2]
 LDCM0526  Nucleophilic fragment 26a MDA-MB-231 C56(2.83); C191(1.79)  LDD2119  [2]
 LDCM0527  Nucleophilic fragment 26b MDA-MB-231 C191(0.75)  LDD2120  [2]
 LDCM0530  Nucleophilic fragment 28a MDA-MB-231 C191(1.04)  LDD2123  [2]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C56(0.94)  LDD2125  [2]
 LDCM0536  Nucleophilic fragment 31 MDA-MB-231 C56(1.05)  LDD2129  [2]
 LDCM0542  Nucleophilic fragment 37 MDA-MB-231 C56(1.53); C191(0.82)  LDD2135  [2]
 LDCM0544  Nucleophilic fragment 39 MDA-MB-231 C56(1.04)  LDD2137  [2]
 LDCM0546  Nucleophilic fragment 40 MDA-MB-231 C56(0.79); C191(0.79)  LDD2140  [2]
 LDCM0549  Nucleophilic fragment 43 MDA-MB-231 C191(0.88)  LDD2143  [2]
 LDCM0552  Nucleophilic fragment 6a MDA-MB-231 C56(0.91); C191(0.83)  LDD2146  [2]
 LDCM0131  RA190 MM1.R C268(2.20); C191(1.38)  LDD0304  [17]
 LDCM0170  Structure8 Ramos 4.69  LDD0433  [15]
 LDCM0003  Sulforaphane MDA-MB-231 2.90  LDD0160  [3]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 3 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
60 kDa lysophospholipase (ASPG) Asparaginase 1 family Q86U10
Caspase-1 (CASP1) Peptidase C14A family P29466
Proteasome subunit alpha type-1 (PSMA1) Peptidase T1A family P25786
Transcription factor
Click To Hide/Show 3 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Zinc finger protein 558 (ZNF558) Krueppel C2H2-type zinc-finger protein family Q96NG5
Transcriptional regulator Kaiso (ZBTB33) . Q86T24
Zinc finger protein 426 (ZNF426) . Q9BUY5
Other
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
BTB/POZ domain-containing protein KCTD6 (KCTD6) . Q8NC69

References

1 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
2 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
3 Competition-based, quantitative chemical proteomics in breast cancer cells identifies new target profiles for sulforaphane. Chem Commun (Camb). 2017 May 4;53(37):5182-5185. doi: 10.1039/c6cc08797c.
Mass spectrometry data entry: PXD006279
4 Chemoproteomic capture of RNA binding activity in living cells. Nat Commun. 2023 Oct 7;14(1):6282. doi: 10.1038/s41467-023-41844-z.
Mass spectrometry data entry: PXD044625
5 Chemoproteomic Profiling Reveals Ethacrynic Acid Targets Adenine Nucleotide Translocases to Impair Mitochondrial Function. Mol Pharm. 2018 Jun 4;15(6):2413-2422. doi: 10.1021/acs.molpharmaceut.8b00250. Epub 2018 May 15.
6 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
7 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
8 SP3-Enabled Rapid and High Coverage Chemoproteomic Identification of Cell-State-Dependent Redox-Sensitive Cysteines. Mol Cell Proteomics. 2022 Apr;21(4):100218. doi: 10.1016/j.mcpro.2022.100218. Epub 2022 Feb 25.
Mass spectrometry data entry: PXD029500 , PXD031647
9 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
10 Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling. Anal Chem. 2021 Feb 2;93(4):2610-2618. doi: 10.1021/acs.analchem.0c04726. Epub 2021 Jan 20.
Mass spectrometry data entry: PXD022279
11 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
12 An Activity-Guided Map of Electrophile-Cysteine Interactions in Primary Human T Cells. Cell. 2020 Aug 20;182(4):1009-1026.e29. doi: 10.1016/j.cell.2020.07.001. Epub 2020 Jul 29.
13 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
14 Proteome-wide covalent ligand discovery in native biological systems. Nature. 2016 Jun 23;534(7608):570-4. doi: 10.1038/nature18002. Epub 2016 Jun 15.
15 2-Sulfonylpyridines as Tunable, Cysteine-Reactive Electrophiles. J Am Chem Soc. 2020 May 13;142(19):8972-8979. doi: 10.1021/jacs.0c02721. Epub 2020 Apr 29.
16 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
17 Physical and Functional Analysis of the Putative Rpn13 Inhibitor RA190. Cell Chem Biol. 2020 Nov 19;27(11):1371-1382.e6. doi: 10.1016/j.chembiol.2020.08.007. Epub 2020 Aug 27.