Details of the Target
General Information of Target
Target ID | LDTP10962 | |||||
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Target Name | Heterogeneous nuclear ribonucleoprotein A/B (HNRNPAB) | |||||
Gene Name | HNRNPAB | |||||
Gene ID | 3182 | |||||
Synonyms |
ABBP1; HNRPAB; Heterogeneous nuclear ribonucleoprotein A/B; hnRNP A/B; APOBEC1-binding protein 1; ABBP-1 |
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3D Structure | ||||||
Sequence |
MPDNRQPRNRQPRIRSGNEPRSAPAMEPDGRGAWAHSRAALDRLEKLLRCSRCTNILREP
VCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDLKINRQLDSMIQLCSKLRNLLHDNEL SDLKEDKPRKSLFNDAGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSY EFVSPSPPADVSERAKKASARSGKKQKKKTLAEINQKWNLEAEKEDGEFDSKEESKQKLV SFCSQPSVISSPQINGEIDLLASGSLTESECFGSLTEVSLPLAEQIESPDTKSRNEVVTP EKVCKNYLTSKKSLPLENNGKRGHHNRLSSPISKRCRTSILSTSGDFVKQTVPSENIPLP ECSSPPSCKRKVGGTSGRKNSNMSDEFISLSPGTPPSTLSSSSYRRVMSSPSAMKLLPNM AVKRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELL LQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMK SLLLLPEKNESSSASHCSVMNTGQRRDGPLVLIGSGLSSEQQKMLSELAVILKAKKYTEF DSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRKVCEQEEKYEIPEGPRRS RLNREQLLPKLFDGCYFYLWGTFKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTV AYHARPDSDQRFCTQYIIYEDLCNYHPERVRQGKVWKAPSSWFIDCVMSFELLPLDS |
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Target Bioclass |
Other
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Subcellular location |
Nucleus
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Function | Binds single-stranded RNA. Has a high affinity for G-rich and U-rich regions of hnRNA. Also binds to APOB mRNA transcripts around the RNA editing site. | |||||
Uniprot ID | ||||||
Ensemble ID | ||||||
HGNC ID |
Probe(s) Labeling This Target
ABPP Probe
Probe name | Structure | Binding Site(Ratio) | Interaction ID | Ref | |
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CY4 Probe Info |
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100.00 | LDD0244 | [1] | |
TH211 Probe Info |
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Y235(20.00); Y240(20.00) | LDD0260 | [2] | |
C-Sul Probe Info |
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3.59 | LDD0066 | [3] | |
TH214 Probe Info |
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Y240(20.00) | LDD0258 | [2] | |
TH216 Probe Info |
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Y240(19.49) | LDD0259 | [2] | |
BTD Probe Info |
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C98(3.96) | LDD1699 | [4] | |
ONAyne Probe Info |
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K215(0.00); K143(0.00); K142(0.00); K83(0.00) | LDD0273 | [5] | |
Probe 1 Probe Info |
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Y235(69.85); Y240(22.54) | LDD3495 | [6] | |
AHL-Pu-1 Probe Info |
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C98(5.07) | LDD0172 | [7] | |
HHS-482 Probe Info |
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Y235(0.82); Y240(0.82) | LDD0285 | [8] | |
HHS-475 Probe Info |
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Y240(0.78); Y235(0.81) | LDD0264 | [9] | |
HHS-465 Probe Info |
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Y235(10.00); Y240(10.00) | LDD2237 | [10] | |
5E-2FA Probe Info |
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N.A. | LDD2235 | [11] | |
AMP probe Probe Info |
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K101(0.00); K232(0.00) | LDD0200 | [12] | |
ATP probe Probe Info |
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K101(0.00); K232(0.00); K227(0.00); K223(0.00) | LDD0199 | [12] | |
m-APA Probe Info |
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N.A. | LDD2231 | [11] | |
IA-alkyne Probe Info |
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N.A. | LDD0032 | [13] | |
IPIAA_H Probe Info |
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N.A. | LDD0030 | [14] | |
IPIAA_L Probe Info |
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N.A. | LDD0031 | [14] | |
Lodoacetamide azide Probe Info |
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N.A. | LDD0037 | [15] | |
ATP probe Probe Info |
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K91(0.00); K223(0.00); K82(0.00); K101(0.00) | LDD0035 | [16] | |
IPM Probe Info |
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C224(0.00); C98(0.00) | LDD0025 | [17] | |
JW-RF-010 Probe Info |
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N.A. | LDD0026 | [17] | |
WYneO Probe Info |
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N.A. | LDD0022 | [18] | |
1d-yne Probe Info |
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N.A. | LDD0356 | [19] | |
ENE Probe Info |
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N.A. | LDD0006 | [18] | |
NHS Probe Info |
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K130(0.00); K232(0.00); K70(0.00); K82(0.00) | LDD0010 | [18] | |
PPMS Probe Info |
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N.A. | LDD0008 | [18] | |
SF Probe Info |
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Y235(0.00); K215(0.00); K125(0.00); Y240(0.00) | LDD0028 | [20] | |
STPyne Probe Info |
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K232(0.00); K223(0.00) | LDD0009 | [18] | |
VSF Probe Info |
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N.A. | LDD0007 | [18] | |
Phosphinate-6 Probe Info |
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C98(0.00); C224(0.00) | LDD0018 | [21] | |
1c-yne Probe Info |
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K232(0.00); K125(0.00); K70(0.00); K91(0.00) | LDD0228 | [19] | |
Acrolein Probe Info |
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C98(0.00); H325(0.00); H217(0.00) | LDD0217 | [22] | |
Cinnamaldehyde Probe Info |
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N.A. | LDD0220 | [22] | |
Crotonaldehyde Probe Info |
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C98(0.00); H217(0.00) | LDD0219 | [22] | |
Methacrolein Probe Info |
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N.A. | LDD0218 | [22] | |
NAIA_5 Probe Info |
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C98(0.00); C224(0.00) | LDD2223 | [23] | |
TER-AC Probe Info |
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N.A. | LDD0426 | [24] |
PAL-AfBPP Probe
Probe name | Structure | Binding Site(Ratio) | Interaction ID | Ref | |
---|---|---|---|---|---|
C004 Probe Info |
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7.06 | LDD1714 | [25] | |
C129 Probe Info |
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4.96 | LDD1811 | [25] | |
C165 Probe Info |
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21.56 | LDD1845 | [25] | |
C166 Probe Info |
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6.96 | LDD1846 | [25] | |
C191 Probe Info |
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9.51 | LDD1868 | [25] | |
C232 Probe Info |
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47.84 | LDD1905 | [25] | |
C314 Probe Info |
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11.31 | LDD1981 | [25] | |
C322 Probe Info |
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6.23 | LDD1988 | [25] | |
C326 Probe Info |
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6.82 | LDD1990 | [25] | |
C338 Probe Info |
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19.84 | LDD2001 | [25] | |
C348 Probe Info |
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11.31 | LDD2009 | [25] | |
C353 Probe Info |
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7.06 | LDD2014 | [25] | |
C355 Probe Info |
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23.26 | LDD2016 | [25] | |
C361 Probe Info |
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18.13 | LDD2022 | [25] | |
C391 Probe Info |
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12.73 | LDD2050 | [25] | |
FFF probe11 Probe Info |
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14.68 | LDD0471 | [26] | |
FFF probe13 Probe Info |
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15.20 | LDD0475 | [26] | |
FFF probe2 Probe Info |
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15.93 | LDD0463 | [26] | |
FFF probe3 Probe Info |
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7.05 | LDD0464 | [26] | |
FFF probe6 Probe Info |
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6.31 | LDD0482 | [26] | |
JN0003 Probe Info |
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12.42 | LDD0469 | [26] | |
STS-1 Probe Info |
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N.A. | LDD0136 | [27] | |
Diazir Probe Info |
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N.A. | LDD0011 | [18] | |
OEA-DA Probe Info |
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3.52 | LDD0046 | [28] |
Competitor(s) Related to This Target
Competitor ID | Name | Cell line | Binding Site(Ratio) | Interaction ID | Ref |
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LDCM0548 | 1-(4-(Benzo[d][1,3]dioxol-5-ylmethyl)piperazin-1-yl)-2-nitroethan-1-one | MDA-MB-231 | C224(0.44) | LDD2142 | [4] |
LDCM0519 | 1-(6-methoxy-3,4-dihydroquinolin-1(2H)-yl)-2-nitroethan-1-one | MDA-MB-231 | C224(0.44) | LDD2112 | [4] |
LDCM0524 | 2-Cyano-N-(2-morpholin-4-yl-ethyl)-acetamide | MDA-MB-231 | C224(1.09) | LDD2117 | [4] |
LDCM0558 | 2-Cyano-N-phenylacetamide | MDA-MB-231 | C224(1.55) | LDD2152 | [4] |
LDCM0025 | 4SU-RNA | HEK-293T | C98(5.07) | LDD0172 | [7] |
LDCM0520 | AKOS000195272 | MDA-MB-231 | C224(0.60) | LDD2113 | [4] |
LDCM0498 | BS-3668 | MDA-MB-231 | C224(0.46) | LDD2091 | [4] |
LDCM0108 | Chloroacetamide | HeLa | C98(0.00); H217(0.00) | LDD0222 | [22] |
LDCM0625 | F8 | Ramos | C98(0.74) | LDD2187 | [29] |
LDCM0572 | Fragment10 | Ramos | C98(0.33) | LDD2189 | [29] |
LDCM0574 | Fragment12 | Ramos | C98(0.49) | LDD2191 | [29] |
LDCM0575 | Fragment13 | Ramos | C98(0.72) | LDD2192 | [29] |
LDCM0576 | Fragment14 | Ramos | C98(0.29) | LDD2193 | [29] |
LDCM0579 | Fragment20 | Ramos | C98(0.32) | LDD2194 | [29] |
LDCM0580 | Fragment21 | Ramos | C98(0.77) | LDD2195 | [29] |
LDCM0582 | Fragment23 | Ramos | C98(0.97) | LDD2196 | [29] |
LDCM0578 | Fragment27 | Ramos | C98(0.60) | LDD2197 | [29] |
LDCM0586 | Fragment28 | Ramos | C98(0.59) | LDD2198 | [29] |
LDCM0588 | Fragment30 | Ramos | C98(0.79) | LDD2199 | [29] |
LDCM0589 | Fragment31 | Ramos | C98(1.02) | LDD2200 | [29] |
LDCM0590 | Fragment32 | Ramos | C98(0.43) | LDD2201 | [29] |
LDCM0468 | Fragment33 | Ramos | C98(0.68) | LDD2202 | [29] |
LDCM0596 | Fragment38 | Ramos | C98(0.55) | LDD2203 | [29] |
LDCM0566 | Fragment4 | Ramos | C98(0.68) | LDD2184 | [29] |
LDCM0610 | Fragment52 | Ramos | C98(0.52) | LDD2204 | [29] |
LDCM0569 | Fragment7 | Ramos | C98(0.28) | LDD2186 | [29] |
LDCM0571 | Fragment9 | Ramos | C98(0.38) | LDD2188 | [29] |
LDCM0116 | HHS-0101 | DM93 | Y240(0.78); Y235(0.81) | LDD0264 | [9] |
LDCM0117 | HHS-0201 | DM93 | Y240(0.83); Y235(0.87) | LDD0265 | [9] |
LDCM0118 | HHS-0301 | DM93 | Y240(0.68); Y235(0.72) | LDD0266 | [9] |
LDCM0119 | HHS-0401 | DM93 | Y240(1.01); Y235(1.10) | LDD0267 | [9] |
LDCM0120 | HHS-0701 | DM93 | Y240(0.81); Y235(0.98) | LDD0268 | [9] |
LDCM0107 | IAA | HeLa | C98(0.00); H217(0.00) | LDD0221 | [22] |
LDCM0123 | JWB131 | DM93 | Y235(0.82); Y240(0.82) | LDD0285 | [8] |
LDCM0124 | JWB142 | DM93 | Y235(0.59); Y240(0.58) | LDD0286 | [8] |
LDCM0125 | JWB146 | DM93 | Y235(1.00); Y240(1.16) | LDD0287 | [8] |
LDCM0126 | JWB150 | DM93 | Y235(2.81); Y240(3.33) | LDD0288 | [8] |
LDCM0127 | JWB152 | DM93 | Y235(1.71); Y240(1.54) | LDD0289 | [8] |
LDCM0128 | JWB198 | DM93 | Y235(1.04); Y240(1.15) | LDD0290 | [8] |
LDCM0129 | JWB202 | DM93 | Y235(0.48); Y240(0.45) | LDD0291 | [8] |
LDCM0130 | JWB211 | DM93 | Y235(0.83); Y240(0.73) | LDD0292 | [8] |
LDCM0022 | KB02 | Ramos | C98(0.27) | LDD2182 | [29] |
LDCM0023 | KB03 | Ramos | C98(0.47) | LDD2183 | [29] |
LDCM0024 | KB05 | Ramos | C98(0.18) | LDD2185 | [29] |
LDCM0109 | NEM | HeLa | H217(0.00); C98(0.00); H325(0.00) | LDD0223 | [22] |
LDCM0496 | Nucleophilic fragment 11a | MDA-MB-231 | C224(0.92) | LDD2089 | [4] |
LDCM0499 | Nucleophilic fragment 12b | MDA-MB-231 | C224(1.28) | LDD2092 | [4] |
LDCM0500 | Nucleophilic fragment 13a | MDA-MB-231 | C224(1.02) | LDD2093 | [4] |
LDCM0501 | Nucleophilic fragment 13b | MDA-MB-231 | C224(1.80) | LDD2094 | [4] |
LDCM0503 | Nucleophilic fragment 14b | MDA-MB-231 | C224(0.18) | LDD2096 | [4] |
LDCM0504 | Nucleophilic fragment 15a | MDA-MB-231 | C224(1.04) | LDD2097 | [4] |
LDCM0505 | Nucleophilic fragment 15b | MDA-MB-231 | C224(0.58) | LDD2098 | [4] |
LDCM0506 | Nucleophilic fragment 16a | MDA-MB-231 | C224(1.42) | LDD2099 | [4] |
LDCM0507 | Nucleophilic fragment 16b | MDA-MB-231 | C224(0.30) | LDD2100 | [4] |
LDCM0512 | Nucleophilic fragment 19a | MDA-MB-231 | C224(2.77) | LDD2105 | [4] |
LDCM0514 | Nucleophilic fragment 20a | MDA-MB-231 | C224(1.10) | LDD2107 | [4] |
LDCM0515 | Nucleophilic fragment 20b | MDA-MB-231 | C224(0.38) | LDD2108 | [4] |
LDCM0516 | Nucleophilic fragment 21a | MDA-MB-231 | C224(0.66) | LDD2109 | [4] |
LDCM0518 | Nucleophilic fragment 22a | MDA-MB-231 | C224(1.28) | LDD2111 | [4] |
LDCM0522 | Nucleophilic fragment 24a | MDA-MB-231 | C224(0.50) | LDD2115 | [4] |
LDCM0523 | Nucleophilic fragment 24b | MDA-MB-231 | C224(0.46) | LDD2116 | [4] |
LDCM0525 | Nucleophilic fragment 25b | MDA-MB-231 | C224(0.43) | LDD2118 | [4] |
LDCM0526 | Nucleophilic fragment 26a | MDA-MB-231 | C224(1.34) | LDD2119 | [4] |
LDCM0527 | Nucleophilic fragment 26b | MDA-MB-231 | C224(0.59) | LDD2120 | [4] |
LDCM0529 | Nucleophilic fragment 27b | MDA-MB-231 | C224(0.27) | LDD2122 | [4] |
LDCM0530 | Nucleophilic fragment 28a | MDA-MB-231 | C224(1.04) | LDD2123 | [4] |
LDCM0531 | Nucleophilic fragment 28b | MDA-MB-231 | C224(0.28) | LDD2124 | [4] |
LDCM0532 | Nucleophilic fragment 29a | MDA-MB-231 | C224(0.90) | LDD2125 | [4] |
LDCM0533 | Nucleophilic fragment 29b | MDA-MB-231 | C224(0.36) | LDD2126 | [4] |
LDCM0534 | Nucleophilic fragment 30a | MDA-MB-231 | C224(1.11) | LDD2127 | [4] |
LDCM0535 | Nucleophilic fragment 30b | MDA-MB-231 | C224(0.70) | LDD2128 | [4] |
LDCM0536 | Nucleophilic fragment 31 | MDA-MB-231 | C224(1.01) | LDD2129 | [4] |
LDCM0540 | Nucleophilic fragment 35 | MDA-MB-231 | C224(0.30) | LDD2133 | [4] |
LDCM0541 | Nucleophilic fragment 36 | MDA-MB-231 | C224(0.74) | LDD2134 | [4] |
LDCM0542 | Nucleophilic fragment 37 | MDA-MB-231 | C224(1.11) | LDD2135 | [4] |
LDCM0543 | Nucleophilic fragment 38 | MDA-MB-231 | C224(1.15) | LDD2136 | [4] |
LDCM0544 | Nucleophilic fragment 39 | MDA-MB-231 | C224(0.99) | LDD2137 | [4] |
LDCM0211 | Nucleophilic fragment 3b | MDA-MB-231 | C224(2.05) | LDD1700 | [4] |
LDCM0546 | Nucleophilic fragment 40 | MDA-MB-231 | C224(1.05) | LDD2140 | [4] |
LDCM0547 | Nucleophilic fragment 41 | MDA-MB-231 | C224(0.25) | LDD2141 | [4] |
LDCM0549 | Nucleophilic fragment 43 | MDA-MB-231 | C224(0.74) | LDD2143 | [4] |
LDCM0550 | Nucleophilic fragment 5a | MDA-MB-231 | C224(1.95) | LDD2144 | [4] |
LDCM0552 | Nucleophilic fragment 6a | MDA-MB-231 | C224(0.95) | LDD2146 | [4] |
LDCM0553 | Nucleophilic fragment 6b | MDA-MB-231 | C224(2.97) | LDD2147 | [4] |
LDCM0554 | Nucleophilic fragment 7a | MDA-MB-231 | C224(0.40) | LDD2148 | [4] |
LDCM0555 | Nucleophilic fragment 7b | MDA-MB-231 | C224(0.39) | LDD2149 | [4] |
LDCM0556 | Nucleophilic fragment 8a | MDA-MB-231 | C224(0.59) | LDD2150 | [4] |
LDCM0557 | Nucleophilic fragment 8b | MDA-MB-231 | C224(0.34) | LDD2151 | [4] |
The Interaction Atlas With This Target
References