Details of the Target

General Information of Target

Target ID LDTP15370
Target Name Pseudouridylate synthase RPUSD2 (RPUSD2)
Gene Name RPUSD2
Gene ID 27079
Synonyms
C15orf19; Pseudouridylate synthase RPUSD2; EC 5.4.99.-; RNA pseudouridylate synthase domain-containing protein 2
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MSSCSNVCGSRQAQAAAEGGYQRYGVRSYLHQFYEDCTASIWEYEDDFQIQRSPNRWSSV
FWKVGLISGTVFVILGLTVLAVGFLVPPKIEAFGEADFVVVDTHAVQFNSALDMYKLAGA
VLFCIGGTSMAGCLLMSVFVKSYSKEEKFLQQKFKERIADIKAHTQPVTKAPGPGETKIP
VTLSRVQNVQPLLAT
Target Bioclass
Enzyme
Family
Pseudouridine synthase RluA family
Function Pseudouridine synthase that catalyzes pseudouridylation of mRNAs.
Uniprot ID
Q8IZ73
Ensemble ID
ENST00000315616.12
HGNC ID
HGNC:24180

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
CCK81 SNV: p.C344R .
COLO678 SNV: p.A470P .
CORL23 SNV: p.R413L .
EFO27 SNV: p.K304N DBIA    Probe Info 
OCIAML2 SNV: p.E228A .
SKOV3 SNV: p.D274Y DBIA    Probe Info 

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 18 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info  		14.23  LDD0402  [1]
TH211
 Probe Info  		Y177(5.17)  LDD0257  [2]
TH214
 Probe Info  		Y177(12.58)  LDD0258  [2]
BTD
 Probe Info  		C344(0.24)  LDD2146  [3]
Johansson_61
 Probe Info  		_(5.86)  LDD1485  [4]
YY4-yne
 Probe Info  		2.11  LDD0400  [5]
AHL-Pu-1
 Probe Info  		C431(3.63)  LDD0171  [6]
DBIA
 Probe Info  		C499(1.29); C502(1.29)  LDD0080  [7]
IA-alkyne
 Probe Info  		C344(0.00); C321(0.00)  LDD0162  [8]
Lodoacetamide azide
 Probe Info  		C246(0.00); C344(0.00)  LDD0037  [9]
NAIA_4
 Probe Info  		C246(0.00); C431(0.00)  LDD2226  [10]
aHNE
 Probe Info  		N.A.  LDD0001  [11]
Compound 10
 Probe Info  		N.A.  LDD2216  [12]
Compound 11
 Probe Info  		N.A.  LDD2213  [12]
IPM
 Probe Info  		C246(0.00); C431(0.00)  LDD2156  [13]
Phosphinate-6
 Probe Info  		N.A.  LDD0018  [14]
AOyne
 Probe Info  		12.30  LDD0443  [15]
NAIA_5
 Probe Info  		N.A.  LDD2223  [10]
PAL-AfBPP Probe
Click To Hide/Show 8 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
C040
 Probe Info  		8.28  LDD1740  [16]
C213
 Probe Info  		61.82  LDD1887  [16]
C275
 Probe Info  		14.72  LDD1945  [16]
C293
 Probe Info  		17.63  LDD1963  [16]
C296
 Probe Info  		14.32  LDD1966  [16]
FFF probe11
 Probe Info  		20.00  LDD0472  [17]
FFF probe3
 Probe Info  		9.82  LDD0465  [17]
photo_BS
 Probe Info  		1.93  LDD0413  [18]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0026  4SU-RNA+native RNA DM93 C431(3.63)  LDD0171  [6]
 LDCM0214  AC1 HCT 116 C246(1.07); C499(0.94); C502(0.94)  LDD0531  [7]
 LDCM0215  AC10 HCT 116 C246(1.09)  LDD0532  [7]
 LDCM0216  AC100 HCT 116 C246(1.00); C499(0.90); C502(0.90)  LDD0533  [7]
 LDCM0217  AC101 HCT 116 C246(1.03); C499(0.78); C502(0.78)  LDD0534  [7]
 LDCM0218  AC102 HCT 116 C246(0.97); C499(0.66); C502(0.66)  LDD0535  [7]
 LDCM0219  AC103 HCT 116 C246(1.21); C499(0.80); C502(0.80)  LDD0536  [7]
 LDCM0220  AC104 HCT 116 C246(1.17); C499(0.76); C502(0.76)  LDD0537  [7]
 LDCM0221  AC105 HCT 116 C246(1.05); C499(0.68); C502(0.68)  LDD0538  [7]
 LDCM0222  AC106 HCT 116 C246(1.08); C499(0.64); C502(0.64)  LDD0539  [7]
 LDCM0223  AC107 HCT 116 C246(1.17); C499(0.68); C502(1.05)  LDD0540  [7]
 LDCM0224  AC108 HCT 116 C246(1.22); C499(0.58); C502(0.62)  LDD0541  [7]
 LDCM0225  AC109 HCT 116 C246(1.08); C499(0.55); C502(0.70)  LDD0542  [7]
 LDCM0226  AC11 HCT 116 C246(1.04)  LDD0543  [7]
 LDCM0227  AC110 HCT 116 C246(1.22); C499(0.65); C502(0.73)  LDD0544  [7]
 LDCM0228  AC111 HCT 116 C246(1.29); C499(0.73); C502(0.55)  LDD0545  [7]
 LDCM0229  AC112 HCT 116 C246(1.14); C499(0.58); C502(0.79)  LDD0546  [7]
 LDCM0230  AC113 HCT 116 C246(1.07)  LDD0547  [7]
 LDCM0231  AC114 HCT 116 C246(1.22)  LDD0548  [7]
 LDCM0232  AC115 HCT 116 C246(1.42)  LDD0549  [7]
 LDCM0233  AC116 HCT 116 C246(1.49)  LDD0550  [7]
 LDCM0234  AC117 HCT 116 C246(1.31)  LDD0551  [7]
 LDCM0235  AC118 HCT 116 C246(1.18)  LDD0552  [7]
 LDCM0236  AC119 HCT 116 C246(1.35)  LDD0553  [7]
 LDCM0237  AC12 HCT 116 C246(1.12)  LDD0554  [7]
 LDCM0238  AC120 HCT 116 C246(1.25)  LDD0555  [7]
 LDCM0239  AC121 HCT 116 C246(1.07)  LDD0556  [7]
 LDCM0240  AC122 HCT 116 C246(1.23)  LDD0557  [7]
 LDCM0241  AC123 HCT 116 C246(1.15)  LDD0558  [7]
 LDCM0242  AC124 HCT 116 C246(1.20)  LDD0559  [7]
 LDCM0243  AC125 HCT 116 C246(1.13)  LDD0560  [7]
 LDCM0244  AC126 HCT 116 C246(1.35)  LDD0561  [7]
 LDCM0245  AC127 HCT 116 C246(1.45)  LDD0562  [7]
 LDCM0246  AC128 HCT 116 C246(1.25); C499(0.81); C502(0.81)  LDD0563  [7]
 LDCM0247  AC129 HCT 116 C246(1.09); C499(1.16); C502(1.16)  LDD0564  [7]
 LDCM0249  AC130 HCT 116 C246(1.31); C499(1.19); C502(1.19)  LDD0566  [7]
 LDCM0250  AC131 HCT 116 C246(1.07); C499(1.19); C502(1.19)  LDD0567  [7]
 LDCM0251  AC132 HCT 116 C246(1.19); C499(1.57); C502(1.57)  LDD0568  [7]
 LDCM0252  AC133 HCT 116 C246(1.22); C499(1.44); C502(1.44)  LDD0569  [7]
 LDCM0253  AC134 HCT 116 C246(1.28); C499(1.35); C502(1.35)  LDD0570  [7]
 LDCM0254  AC135 HCT 116 C246(1.22); C499(1.49); C502(1.49)  LDD0571  [7]
 LDCM0255  AC136 HCT 116 C246(1.22); C499(1.61); C502(1.61)  LDD0572  [7]
 LDCM0256  AC137 HCT 116 C246(1.06); C499(1.17); C502(1.17)  LDD0573  [7]
 LDCM0257  AC138 HCT 116 C246(1.35); C499(1.18); C502(1.18)  LDD0574  [7]
 LDCM0258  AC139 HCT 116 C246(1.35); C499(1.49); C502(1.49)  LDD0575  [7]
 LDCM0259  AC14 HCT 116 C246(1.15)  LDD0576  [7]
 LDCM0260  AC140 HCT 116 C246(1.35); C499(1.80); C502(1.80)  LDD0577  [7]
 LDCM0261  AC141 HCT 116 C246(1.19); C499(1.65); C502(1.65)  LDD0578  [7]
 LDCM0262  AC142 HCT 116 C246(1.03); C499(1.61); C502(1.61)  LDD0579  [7]
 LDCM0263  AC143 HCT 116 C499(0.99); C502(0.99); C246(1.10)  LDD0580  [7]
 LDCM0264  AC144 HCT 116 C499(0.93); C502(0.93); C246(1.31)  LDD0581  [7]
 LDCM0265  AC145 HCT 116 C499(0.93); C502(0.93); C246(1.07)  LDD0582  [7]
 LDCM0266  AC146 HCT 116 C499(0.98); C502(0.98); C246(1.47)  LDD0583  [7]
 LDCM0267  AC147 HCT 116 C499(0.95); C502(0.95); C246(1.54)  LDD0584  [7]
 LDCM0268  AC148 HCT 116 C499(1.02); C502(1.02); C246(1.76)  LDD0585  [7]
 LDCM0269  AC149 HCT 116 C499(0.96); C502(0.96); C246(1.43)  LDD0586  [7]
 LDCM0270  AC15 HCT 116 C246(1.19)  LDD0587  [7]
 LDCM0271  AC150 HCT 116 C246(1.25); C499(1.29); C502(1.29)  LDD0588  [7]
 LDCM0272  AC151 HCT 116 C499(1.11); C502(1.11); C246(1.13)  LDD0589  [7]
 LDCM0273  AC152 HCT 116 C499(0.85); C502(0.85); C246(1.48)  LDD0590  [7]
 LDCM0274  AC153 HCT 116 C499(0.93); C502(0.93); C246(1.77)  LDD0591  [7]
 LDCM0621  AC154 HCT 116 C246(1.24); C499(1.14); C502(1.14)  LDD2158  [7]
 LDCM0622  AC155 HCT 116 C246(1.40); C499(0.80); C502(0.80)  LDD2159  [7]
 LDCM0623  AC156 HCT 116 C246(1.16); C499(1.11); C502(1.11)  LDD2160  [7]
 LDCM0624  AC157 HCT 116 C246(0.94); C499(1.15); C502(1.15)  LDD2161  [7]
 LDCM0276  AC17 HCT 116 C246(0.98)  LDD0593  [7]
 LDCM0277  AC18 HCT 116 C246(1.18)  LDD0594  [7]
 LDCM0278  AC19 HCT 116 C246(0.97)  LDD0595  [7]
 LDCM0279  AC2 HCT 116 C499(1.03); C502(1.03); C246(1.18)  LDD0596  [7]
 LDCM0280  AC20 HCT 116 C246(0.95)  LDD0597  [7]
 LDCM0281  AC21 HCT 116 C246(1.06)  LDD0598  [7]
 LDCM0282  AC22 HCT 116 C246(1.03)  LDD0599  [7]
 LDCM0283  AC23 HCT 116 C246(0.86)  LDD0600  [7]
 LDCM0284  AC24 HCT 116 C246(0.95)  LDD0601  [7]
 LDCM0285  AC25 HCT 116 C499(1.11); C502(1.11); C246(1.14)  LDD0602  [7]
 LDCM0286  AC26 HCT 116 C499(1.03); C502(1.03); C246(1.20)  LDD0603  [7]
 LDCM0287  AC27 HCT 116 C499(1.20); C502(1.20); C246(1.23)  LDD0604  [7]
 LDCM0288  AC28 HCT 116 C499(1.10); C502(1.10); C246(1.12)  LDD0605  [7]
 LDCM0289  AC29 HCT 116 C246(1.09); C499(1.15); C502(1.15)  LDD0606  [7]
 LDCM0290  AC3 HCT 116 C499(0.94); C502(0.94); C246(1.08)  LDD0607  [7]
 LDCM0291  AC30 HCT 116 C246(1.07); C499(1.25); C502(1.25)  LDD0608  [7]
 LDCM0292  AC31 HCT 116 C499(1.19); C502(1.19); C246(1.30)  LDD0609  [7]
 LDCM0293  AC32 HCT 116 C499(1.05); C502(1.05); C246(1.38)  LDD0610  [7]
 LDCM0294  AC33 HCT 116 C246(1.20); C499(1.39); C502(1.39)  LDD0611  [7]
 LDCM0295  AC34 HCT 116 C499(0.98); C502(0.98); C246(1.20)  LDD0612  [7]
 LDCM0296  AC35 HCT 116 C246(0.88)  LDD0613  [7]
 LDCM0297  AC36 HCT 116 C246(0.99)  LDD0614  [7]
 LDCM0298  AC37 HCT 116 C246(0.90)  LDD0615  [7]
 LDCM0299  AC38 HCT 116 C246(0.89)  LDD0616  [7]
 LDCM0300  AC39 HCT 116 C246(1.07)  LDD0617  [7]
 LDCM0301  AC4 HCT 116 C499(0.97); C502(0.97); C246(1.36)  LDD0618  [7]
 LDCM0302  AC40 HCT 116 C246(1.39)  LDD0619  [7]
 LDCM0303  AC41 HCT 116 C246(0.86)  LDD0620  [7]
 LDCM0304  AC42 HCT 116 C246(0.93)  LDD0621  [7]
 LDCM0305  AC43 HCT 116 C246(0.94)  LDD0622  [7]
 LDCM0306  AC44 HCT 116 C246(1.06)  LDD0623  [7]
 LDCM0307  AC45 HCT 116 C246(0.98)  LDD0624  [7]
 LDCM0308  AC46 HCT 116 C246(1.05)  LDD0625  [7]
 LDCM0309  AC47 HCT 116 C246(0.97)  LDD0626  [7]
 LDCM0310  AC48 HCT 116 C246(0.95)  LDD0627  [7]
 LDCM0311  AC49 HCT 116 C246(1.32)  LDD0628  [7]
 LDCM0312  AC5 HCT 116 C499(0.75); C502(0.75); C246(1.24)  LDD0629  [7]
 LDCM0313  AC50 HCT 116 C246(1.35)  LDD0630  [7]
 LDCM0314  AC51 HCT 116 C246(0.87)  LDD0631  [7]
 LDCM0315  AC52 HCT 116 C246(1.00)  LDD0632  [7]
 LDCM0316  AC53 HCT 116 C246(1.11)  LDD0633  [7]
 LDCM0317  AC54 HCT 116 C246(1.24)  LDD0634  [7]
 LDCM0318  AC55 HCT 116 C246(1.12)  LDD0635  [7]
 LDCM0319  AC56 HCT 116 C246(1.30)  LDD0636  [7]
 LDCM0320  AC57 HCT 116 C246(1.19); C499(1.32); C502(1.32)  LDD0637  [7]
 LDCM0321  AC58 HCT 116 C499(1.13); C502(1.13); C246(1.27)  LDD0638  [7]
 LDCM0322  AC59 HCT 116 C246(1.30); C499(1.37); C502(1.37)  LDD0639  [7]
 LDCM0323  AC6 HCT 116 C246(1.12)  LDD0640  [7]
 LDCM0324  AC60 HCT 116 C246(1.15); C499(1.15); C502(1.15)  LDD0641  [7]
 LDCM0325  AC61 HCT 116 C246(1.33); C499(1.38); C502(1.38)  LDD0642  [7]
 LDCM0326  AC62 HCT 116 C499(1.13); C502(1.13); C246(1.30)  LDD0643  [7]
 LDCM0327  AC63 HCT 116 C246(1.30); C499(1.49); C502(1.49)  LDD0644  [7]
 LDCM0328  AC64 HCT 116 C499(1.36); C502(1.36); C246(1.41)  LDD0645  [7]
 LDCM0329  AC65 HCT 116 C499(1.22); C502(1.22); C246(1.29)  LDD0646  [7]
 LDCM0330  AC66 HCT 116 C246(1.17); C499(1.26); C502(1.26)  LDD0647  [7]
 LDCM0331  AC67 HCT 116 C499(1.19); C502(1.19); C246(1.53)  LDD0648  [7]
 LDCM0332  AC68 HCT 116 C246(1.03); C499(1.35); C502(1.35)  LDD0649  [7]
 LDCM0333  AC69 HCT 116 C246(0.99); C499(1.02); C502(1.02)  LDD0650  [7]
 LDCM0334  AC7 HCT 116 C246(1.05)  LDD0651  [7]
 LDCM0335  AC70 HCT 116 C499(0.82); C502(0.82); C246(1.10)  LDD0652  [7]
 LDCM0336  AC71 HCT 116 C246(1.01); C499(1.07); C502(1.07)  LDD0653  [7]
 LDCM0337  AC72 HCT 116 C499(1.06); C502(1.06); C246(1.08)  LDD0654  [7]
 LDCM0338  AC73 HCT 116 C499(0.86); C502(0.86); C246(1.31)  LDD0655  [7]
 LDCM0339  AC74 HCT 116 C499(0.96); C502(0.96); C246(1.27)  LDD0656  [7]
 LDCM0340  AC75 HCT 116 C499(0.74); C502(0.74); C246(1.33)  LDD0657  [7]
 LDCM0341  AC76 HCT 116 C499(1.03); C502(1.03); C246(1.16)  LDD0658  [7]
 LDCM0342  AC77 HCT 116 C499(0.98); C502(0.98); C246(1.14)  LDD0659  [7]
 LDCM0343  AC78 HCT 116 C246(0.89); C499(1.13); C502(1.13)  LDD0660  [7]
 LDCM0344  AC79 HCT 116 C499(0.98); C502(0.98); C246(1.07)  LDD0661  [7]
 LDCM0345  AC8 HCT 116 C246(1.26)  LDD0662  [7]
 LDCM0346  AC80 HCT 116 C499(0.94); C502(0.94); C246(1.15)  LDD0663  [7]
 LDCM0347  AC81 HCT 116 C499(0.94); C502(0.94); C246(1.34)  LDD0664  [7]
 LDCM0348  AC82 HCT 116 C499(0.30); C502(0.30); C246(1.38)  LDD0665  [7]
 LDCM0349  AC83 HCT 116 C246(1.17)  LDD0666  [7]
 LDCM0350  AC84 HCT 116 C246(1.20)  LDD0667  [7]
 LDCM0351  AC85 HCT 116 C246(1.21)  LDD0668  [7]
 LDCM0352  AC86 HCT 116 C246(1.18)  LDD0669  [7]
 LDCM0353  AC87 HCT 116 C246(1.10)  LDD0670  [7]
 LDCM0354  AC88 HCT 116 C246(1.14)  LDD0671  [7]
 LDCM0355  AC89 HCT 116 C246(1.12)  LDD0672  [7]
 LDCM0357  AC90 HCT 116 C246(1.04)  LDD0674  [7]
 LDCM0358  AC91 HCT 116 C246(0.99)  LDD0675  [7]
 LDCM0359  AC92 HCT 116 C246(1.12)  LDD0676  [7]
 LDCM0360  AC93 HCT 116 C246(1.17)  LDD0677  [7]
 LDCM0361  AC94 HCT 116 C246(1.06)  LDD0678  [7]
 LDCM0362  AC95 HCT 116 C246(1.20)  LDD0679  [7]
 LDCM0363  AC96 HCT 116 C246(1.08)  LDD0680  [7]
 LDCM0364  AC97 HCT 116 C246(1.19)  LDD0681  [7]
 LDCM0365  AC98 HCT 116 C499(0.33); C502(0.33); C246(1.45)  LDD0682  [7]
 LDCM0366  AC99 HCT 116 C499(0.75); C502(0.75); C246(0.98)  LDD0683  [7]
 LDCM0248  AKOS034007472 HCT 116 C246(0.89)  LDD0565  [7]
 LDCM0356  AKOS034007680 HCT 116 C246(1.15)  LDD0673  [7]
 LDCM0275  AKOS034007705 HCT 116 C246(1.55)  LDD0592  [7]
 LDCM0156  Aniline NCI-H1299 13.83  LDD0403  [1]
 LDCM0020  ARS-1620 HCC44 C499(1.22); C502(1.22)  LDD2171  [7]
 LDCM0200  BPK-25 T cell C431(7.11)  LDD0529  [19]
 LDCM0160  Bromosprine U2OS 1.93  LDD0413  [18]
 LDCM0367  CL1 HCT 116 C499(0.66); C502(0.66); C246(0.92)  LDD0684  [7]
 LDCM0368  CL10 HCT 116 C499(0.82); C502(0.82); C246(1.04)  LDD0685  [7]
 LDCM0369  CL100 HCT 116 C499(0.98); C502(0.98); C246(1.28)  LDD0686  [7]
 LDCM0370  CL101 HCT 116 C246(1.13)  LDD0687  [7]
 LDCM0371  CL102 HCT 116 C246(0.92)  LDD0688  [7]
 LDCM0372  CL103 HCT 116 C246(0.85)  LDD0689  [7]
 LDCM0373  CL104 HCT 116 C246(1.06)  LDD0690  [7]
 LDCM0374  CL105 HCT 116 C246(1.40)  LDD0691  [7]
 LDCM0375  CL106 HCT 116 C246(1.23)  LDD0692  [7]
 LDCM0376  CL107 HCT 116 C246(1.20)  LDD0693  [7]
 LDCM0377  CL108 HCT 116 C246(1.36)  LDD0694  [7]
 LDCM0378  CL109 HCT 116 C246(1.19)  LDD0695  [7]
 LDCM0379  CL11 HCT 116 C499(1.32); C502(1.32); C246(1.88)  LDD0696  [7]
 LDCM0380  CL110 HCT 116 C246(1.28)  LDD0697  [7]
 LDCM0381  CL111 HCT 116 C246(1.59)  LDD0698  [7]
 LDCM0382  CL112 HCT 116 C499(0.95); C502(0.95); C246(1.23)  LDD0699  [7]
 LDCM0383  CL113 HCT 116 C499(1.07); C502(1.07); C246(1.21)  LDD0700  [7]
 LDCM0384  CL114 HCT 116 C499(1.02); C502(1.02); C246(1.39)  LDD0701  [7]
 LDCM0385  CL115 HCT 116 C246(1.15); C499(1.16); C502(1.16)  LDD0702  [7]
 LDCM0386  CL116 HCT 116 C499(1.12); C502(1.12); C246(1.22)  LDD0703  [7]
 LDCM0387  CL117 HCT 116 C246(1.03)  LDD0704  [7]
 LDCM0388  CL118 HCT 116 C246(1.01)  LDD0705  [7]
 LDCM0389  CL119 HCT 116 C246(1.09)  LDD0706  [7]
 LDCM0390  CL12 HCT 116 C499(1.23); C502(1.23); C246(1.83)  LDD0707  [7]
 LDCM0391  CL120 HCT 116 C246(1.06)  LDD0708  [7]
 LDCM0392  CL121 HCT 116 C246(0.80)  LDD0709  [7]
 LDCM0393  CL122 HCT 116 C246(1.29)  LDD0710  [7]
 LDCM0394  CL123 HCT 116 C246(1.32)  LDD0711  [7]
 LDCM0395  CL124 HCT 116 C246(1.33)  LDD0712  [7]
 LDCM0396  CL125 HCT 116 C246(1.07); C499(1.13); C502(1.13)  LDD0713  [7]
 LDCM0397  CL126 HCT 116 C499(0.88); C502(0.88); C246(1.70)  LDD0714  [7]
 LDCM0398  CL127 HCT 116 C246(1.00); C499(1.17); C502(1.17)  LDD0715  [7]
 LDCM0399  CL128 HCT 116 C246(1.34); C499(1.59); C502(1.59)  LDD0716  [7]
 LDCM0400  CL13 HCT 116 C499(1.47); C502(1.47); C246(1.56)  LDD0717  [7]
 LDCM0401  CL14 HCT 116 C499(1.02); C502(1.02); C246(1.97)  LDD0718  [7]
 LDCM0402  CL15 HCT 116 C499(1.24); C502(1.24); C246(1.24)  LDD0719  [7]
 LDCM0403  CL16 HCT 116 C499(1.05); C502(1.05); C246(1.18)  LDD0720  [7]
 LDCM0404  CL17 HCT 116 C246(1.24); C499(1.26); C502(1.26)  LDD0721  [7]
 LDCM0405  CL18 HCT 116 C246(1.01); C499(1.91); C502(1.91)  LDD0722  [7]
 LDCM0406  CL19 HCT 116 C246(1.03); C499(1.50); C502(1.50)  LDD0723  [7]
 LDCM0407  CL2 HCT 116 C246(0.87); C499(0.95); C502(0.95)  LDD0724  [7]
 LDCM0408  CL20 HCT 116 C246(1.33); C499(2.04); C502(2.04)  LDD0725  [7]
 LDCM0409  CL21 HCT 116 C246(1.23); C499(1.51); C502(1.51)  LDD0726  [7]
 LDCM0410  CL22 HCT 116 C246(1.34); C499(1.65); C502(1.65)  LDD0727  [7]
 LDCM0411  CL23 HCT 116 C246(0.97); C499(1.41); C502(1.41)  LDD0728  [7]
 LDCM0412  CL24 HCT 116 C246(1.35); C499(1.66); C502(1.66)  LDD0729  [7]
 LDCM0413  CL25 HCT 116 C246(1.29); C499(1.72); C502(1.72)  LDD0730  [7]
 LDCM0414  CL26 HCT 116 C246(1.09); C499(1.59); C502(1.59)  LDD0731  [7]
 LDCM0415  CL27 HCT 116 C246(1.01); C499(1.78); C502(1.78)  LDD0732  [7]
 LDCM0416  CL28 HCT 116 C246(1.16); C499(1.62); C502(1.62)  LDD0733  [7]
 LDCM0417  CL29 HCT 116 C246(1.16); C499(1.57); C502(1.57)  LDD0734  [7]
 LDCM0418  CL3 HCT 116 C246(0.90); C499(1.10); C502(1.10)  LDD0735  [7]
 LDCM0419  CL30 HCT 116 C246(0.97); C499(1.61); C502(1.61)  LDD0736  [7]
 LDCM0420  CL31 HCT 116 C246(1.09)  LDD0737  [7]
 LDCM0421  CL32 HCT 116 C246(0.90); C499(0.83); C502(0.83)  LDD0738  [7]
 LDCM0422  CL33 HCT 116 C246(1.24); C499(0.40); C502(0.40)  LDD0739  [7]
 LDCM0423  CL34 HCT 116 C246(1.28); C499(0.69); C502(0.69)  LDD0740  [7]
 LDCM0424  CL35 HCT 116 C246(1.31); C499(0.90); C502(0.90)  LDD0741  [7]
 LDCM0425  CL36 HCT 116 C246(1.14); C499(0.43); C502(0.43)  LDD0742  [7]
 LDCM0426  CL37 HCT 116 C246(1.24); C499(0.70); C502(0.70)  LDD0743  [7]
 LDCM0428  CL39 HCT 116 C246(1.30); C499(0.54); C502(0.54)  LDD0745  [7]
 LDCM0429  CL4 HCT 116 C246(1.96); C499(1.11); C502(1.11)  LDD0746  [7]
 LDCM0430  CL40 HCT 116 C246(1.21); C499(0.84); C502(0.84)  LDD0747  [7]
 LDCM0431  CL41 HCT 116 C246(1.18); C499(0.60); C502(0.60)  LDD0748  [7]
 LDCM0432  CL42 HCT 116 C246(1.77); C499(0.55); C502(0.55)  LDD0749  [7]
 LDCM0433  CL43 HCT 116 C246(1.13); C499(0.64); C502(0.64)  LDD0750  [7]
 LDCM0434  CL44 HCT 116 C246(1.14); C499(0.53); C502(0.53)  LDD0751  [7]
 LDCM0435  CL45 HCT 116 C246(1.21); C499(0.57); C502(0.57)  LDD0752  [7]
 LDCM0436  CL46 HCT 116 C246(0.97); C499(1.02); C502(1.02)  LDD0753  [7]
 LDCM0437  CL47 HCT 116 C246(1.09); C499(0.99); C502(0.99)  LDD0754  [7]
 LDCM0438  CL48 HCT 116 C246(0.97); C499(1.15); C502(1.15)  LDD0755  [7]
 LDCM0439  CL49 HCT 116 C246(1.06); C499(0.90); C502(0.90)  LDD0756  [7]
 LDCM0440  CL5 HCT 116 C246(1.38); C499(1.08); C502(1.08)  LDD0757  [7]
 LDCM0441  CL50 HCT 116 C246(1.06); C499(0.96); C502(0.96)  LDD0758  [7]
 LDCM0442  CL51 HCT 116 C246(1.06); C499(1.41); C502(1.41)  LDD0759  [7]
 LDCM0443  CL52 HCT 116 C246(1.07); C499(0.96); C502(0.96)  LDD0760  [7]
 LDCM0444  CL53 HCT 116 C246(0.89); C499(0.80); C502(0.80)  LDD0761  [7]
 LDCM0445  CL54 HCT 116 C246(0.79); C499(1.14); C502(1.14)  LDD0762  [7]
 LDCM0446  CL55 HCT 116 C246(0.70); C499(1.31); C502(1.31)  LDD0763  [7]
 LDCM0447  CL56 HCT 116 C246(1.03); C499(0.93); C502(0.93)  LDD0764  [7]
 LDCM0448  CL57 HCT 116 C246(0.85); C499(0.91); C502(0.91)  LDD0765  [7]
 LDCM0449  CL58 HCT 116 C246(0.82); C499(1.13); C502(1.13)  LDD0766  [7]
 LDCM0450  CL59 HCT 116 C246(0.90); C499(1.11); C502(1.11)  LDD0767  [7]
 LDCM0451  CL6 HCT 116 C246(0.83); C499(1.11); C502(1.11)  LDD0768  [7]
 LDCM0452  CL60 HCT 116 C246(1.03); C499(0.94); C502(0.94)  LDD0769  [7]
 LDCM0453  CL61 HCT 116 C246(1.12); C499(0.98); C502(0.98)  LDD0770  [7]
 LDCM0454  CL62 HCT 116 C246(1.15); C499(1.04); C502(1.04)  LDD0771  [7]
 LDCM0455  CL63 HCT 116 C246(1.33); C499(1.05); C502(1.05)  LDD0772  [7]
 LDCM0456  CL64 HCT 116 C246(1.46); C499(0.91); C502(0.91)  LDD0773  [7]
 LDCM0457  CL65 HCT 116 C246(1.23); C499(0.97); C502(0.97)  LDD0774  [7]
 LDCM0458  CL66 HCT 116 C246(1.64); C499(1.12); C502(1.12)  LDD0775  [7]
 LDCM0459  CL67 HCT 116 C246(1.40); C499(1.03); C502(1.03)  LDD0776  [7]
 LDCM0460  CL68 HCT 116 C246(1.41); C499(1.02); C502(1.02)  LDD0777  [7]
 LDCM0461  CL69 HCT 116 C246(1.19); C499(1.05); C502(1.05)  LDD0778  [7]
 LDCM0462  CL7 HCT 116 C246(1.45); C499(1.33); C502(1.33)  LDD0779  [7]
 LDCM0463  CL70 HCT 116 C246(1.21); C499(1.07); C502(1.07)  LDD0780  [7]
 LDCM0464  CL71 HCT 116 C246(1.35); C499(1.04); C502(1.04)  LDD0781  [7]
 LDCM0465  CL72 HCT 116 C246(1.17); C499(0.96); C502(0.96)  LDD0782  [7]
 LDCM0466  CL73 HCT 116 C246(2.33); C499(1.05); C502(1.05)  LDD0783  [7]
 LDCM0467  CL74 HCT 116 C246(1.35); C499(1.01); C502(1.01)  LDD0784  [7]
 LDCM0469  CL76 HCT 116 C246(1.08); C499(1.24); C502(1.24)  LDD0786  [7]
 LDCM0470  CL77 HCT 116 C246(0.99); C499(1.01); C502(1.01)  LDD0787  [7]
 LDCM0471  CL78 HCT 116 C246(1.06); C499(1.07); C502(1.07)  LDD0788  [7]
 LDCM0472  CL79 HCT 116 C246(1.48); C499(1.33); C502(1.33)  LDD0789  [7]
 LDCM0473  CL8 HCT 116 C246(1.21); C499(1.15); C502(1.15)  LDD0790  [7]
 LDCM0474  CL80 HCT 116 C246(1.12); C499(1.41); C502(1.41)  LDD0791  [7]
 LDCM0475  CL81 HCT 116 C246(1.13); C499(1.11); C502(1.11)  LDD0792  [7]
 LDCM0476  CL82 HCT 116 C246(1.56); C499(1.22); C502(1.22)  LDD0793  [7]
 LDCM0477  CL83 HCT 116 C246(1.33); C499(1.19); C502(1.19)  LDD0794  [7]
 LDCM0478  CL84 HCT 116 C246(1.71); C499(1.36); C502(1.36)  LDD0795  [7]
 LDCM0479  CL85 HCT 116 C246(1.16); C499(1.00); C502(1.00)  LDD0796  [7]
 LDCM0480  CL86 HCT 116 C246(1.09); C499(1.06); C502(1.06)  LDD0797  [7]
 LDCM0481  CL87 HCT 116 C246(1.16); C499(1.12); C502(1.12)  LDD0798  [7]
 LDCM0482  CL88 HCT 116 C246(1.35); C499(1.29); C502(1.29)  LDD0799  [7]
 LDCM0483  CL89 HCT 116 C246(1.76); C499(1.33); C502(1.33)  LDD0800  [7]
 LDCM0484  CL9 HCT 116 C246(1.02); C499(1.04); C502(1.04)  LDD0801  [7]
 LDCM0485  CL90 HCT 116 C246(1.68); C499(0.81); C502(0.81)  LDD0802  [7]
 LDCM0486  CL91 HCT 116 C246(1.30); C499(1.01); C502(1.01)  LDD0803  [7]
 LDCM0487  CL92 HCT 116 C246(1.27); C499(0.87); C502(0.87)  LDD0804  [7]
 LDCM0488  CL93 HCT 116 C246(1.16); C499(0.82); C502(0.82)  LDD0805  [7]
 LDCM0489  CL94 HCT 116 C246(1.42); C499(0.87); C502(0.87)  LDD0806  [7]
 LDCM0490  CL95 HCT 116 C246(1.42); C499(0.88); C502(0.88)  LDD0807  [7]
 LDCM0491  CL96 HCT 116 C246(1.13); C499(1.15); C502(1.15)  LDD0808  [7]
 LDCM0492  CL97 HCT 116 C246(1.16); C499(0.98); C502(0.98)  LDD0809  [7]
 LDCM0493  CL98 HCT 116 C246(1.34); C499(0.88); C502(0.88)  LDD0810  [7]
 LDCM0494  CL99 HCT 116 C246(1.27); C499(0.99); C502(0.99)  LDD0811  [7]
 LDCM0495  E2913 HEK-293T C246(0.95)  LDD1698  [20]
 LDCM0202  EV-93 T cell C431(20.00)  LDD0527  [19]
 LDCM0625  F8 Ramos C246(0.81)  LDD2187  [21]
 LDCM0573  Fragment11 Ramos C246(2.18)  LDD2190  [21]
 LDCM0576  Fragment14 Ramos C246(0.68)  LDD2193  [21]
 LDCM0580  Fragment21 MDA-MB-231 C246(1.75)  LDD1473  [4]
 LDCM0589  Fragment31 MDA-MB-231 C246(0.42)  LDD1477  [4]
 LDCM0468  Fragment33 HCT 116 C246(1.38); C499(1.00); C502(1.00)  LDD0785  [7]
 LDCM0596  Fragment38 MDA-MB-231 C246(1.74)  LDD1480  [4]
 LDCM0566  Fragment4 Ramos C246(1.09)  LDD2184  [21]
 LDCM0427  Fragment51 HCT 116 C246(1.49); C499(0.50); C502(0.50)  LDD0744  [7]
 LDCM0616  Fragment61 Jurkat _(12.35)  LDD1489  [4]
 LDCM0569  Fragment7 Jurkat _(5.86)  LDD1485  [4]
 LDCM0571  Fragment9 Ramos C246(6.50)  LDD1464  [4]
 LDCM0022  KB02 HCT 116 C499(1.29); C502(1.29)  LDD0080  [7]
 LDCM0023  KB03 HCT 116 C499(1.24); C502(1.24)  LDD0081  [7]
 LDCM0024  KB05 HCT 116 C499(0.61); C502(0.61)  LDD0082  [7]
 LDCM0169  KB63 Ramos 5.49  LDD0432  [22]
 LDCM0552  Nucleophilic fragment 6a MDA-MB-231 C344(0.24)  LDD2146  [3]
 LDCM0170  Structure8 Ramos 17.64  LDD0433  [22]
 LDCM0021  THZ1 HCT 116 C499(1.22); C502(1.22)  LDD2173  [7]
 LDCM0154  YY4 T cell 2.11  LDD0400  [5]

References

1 Quantitative and Site-Specific Chemoproteomic Profiling of Targets of Acrolein. Chem Res Toxicol. 2019 Mar 18;32(3):467-473. doi: 10.1021/acs.chemrestox.8b00343. Epub 2019 Jan 15.
2 Chemoproteomic profiling of kinases in live cells using electrophilic sulfonyl triazole probes. Chem Sci. 2021 Jan 21;12(9):3295-3307. doi: 10.1039/d0sc06623k.
3 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
4 Proteome-wide covalent ligand discovery in native biological systems. Nature. 2016 Jun 23;534(7608):570-4. doi: 10.1038/nature18002. Epub 2016 Jun 15.
5 A Chemical Proteomic Probe for the Mitochondrial Pyruvate Carrier Complex. Angew Chem Int Ed Engl. 2020 Mar 2;59(10):3896-3899. doi: 10.1002/anie.201914391. Epub 2020 Feb 11.
6 Chemoproteomic capture of RNA binding activity in living cells. Nat Commun. 2023 Oct 7;14(1):6282. doi: 10.1038/s41467-023-41844-z.
Mass spectrometry data entry: PXD044625
7 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
8 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
9 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
10 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
11 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
12 Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling. Anal Chem. 2021 Feb 2;93(4):2610-2618. doi: 10.1021/acs.analchem.0c04726. Epub 2021 Jan 20.
Mass spectrometry data entry: PXD022279
13 Benchmarking Cleavable Biotin Tags for Peptide-Centric Chemoproteomics. J Proteome Res. 2022 May 6;21(5):1349-1358. doi: 10.1021/acs.jproteome.2c00174. Epub 2022 Apr 25.
Mass spectrometry data entry: PXD031019
14 DFT-Guided Discovery of Ethynyl-Triazolyl-Phosphinates as Modular Electrophiles for Chemoselective Cysteine Bioconjugation and Profiling. Angew Chem Int Ed Engl. 2022 Oct 10;61(41):e202205348. doi: 10.1002/anie.202205348. Epub 2022 Aug 22.
Mass spectrometry data entry: PXD033004
15 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
16 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587
17 Ligand and Target Discovery by Fragment-Based Screening in Human Cells. Cell. 2017 Jan 26;168(3):527-541.e29. doi: 10.1016/j.cell.2016.12.029. Epub 2017 Jan 19.
18 Chemical Proteomic Profiling of Bromodomains Enables the Wide-Spectrum Evaluation of Bromodomain Inhibitors in Living Cells. J Am Chem Soc. 2019 Jul 24;141(29):11497-11505. doi: 10.1021/jacs.9b02738. Epub 2019 Jul 9.
19 An Activity-Guided Map of Electrophile-Cysteine Interactions in Primary Human T Cells. Cell. 2020 Aug 20;182(4):1009-1026.e29. doi: 10.1016/j.cell.2020.07.001. Epub 2020 Jul 29.
20 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
21 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
22 2-Sulfonylpyridines as Tunable, Cysteine-Reactive Electrophiles. J Am Chem Soc. 2020 May 13;142(19):8972-8979. doi: 10.1021/jacs.0c02721. Epub 2020 Apr 29.