Details of the Target

General Information of Target

Target ID LDTP14888
Target Name Pre-rRNA-processing protein TSR1 homolog (TSR1)
Gene Name TSR1
Gene ID 55720
Synonyms
KIAA1401; Pre-rRNA-processing protein TSR1 homolog
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
Sequence
MEAGPHPRPGHCCKPGGRLDMNHGFVHHIRRNQIARDDYDKKVKQAAKEKVRRRHTPAPT
RPRKPDLQVYLPRHRDVSAHPRNPDYEESGESSSSGGSELEPSGHQLFCLEYEADSGEVT
SVIVYQGDDPGKVSEKVSAHTPLDPPMREALKLRIQEEIAKRQSQH
Target Bioclass
Enzyme
Family
TRAFAC class translation factor GTPase superfamily, Bms1-like GTPase family, TSR1 subfamily
Subcellular location
Nucleus, nucleolus
Function Required during maturation of the 40S ribosomal subunit in the nucleolus.
Uniprot ID
Q2NL82
Ensemble ID
ENST00000301364.10
HGNC ID
HGNC:25542

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 26 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info  		15.00  LDD0402  [1]
A-EBA
 Probe Info  		2.25  LDD0215  [2]
CY-1
 Probe Info  		100.00  LDD0243  [3]
CY4
 Probe Info  		100.00  LDD0244  [3]
TH211
 Probe Info  		Y524(20.00); Y779(11.57); Y770(11.34)  LDD0257  [4]
TH216
 Probe Info  		Y524(10.08); Y770(5.73)  LDD0259  [4]
STPyne
 Probe Info  		K705(12.87)  LDD2217  [5]
BTD
 Probe Info  		C618(1.15)  LDD2109  [6]
AHL-Pu-1
 Probe Info  		C329(2.68); C126(2.54)  LDD0168  [7]
DBIA
 Probe Info  		C126(1.02)  LDD0078  [8]
W1
 Probe Info  		C126(2.75)  LDD0239  [9]
AMP probe
 Probe Info  		N.A.  LDD0200  [10]
ATP probe
 Probe Info  		K771(0.00); K611(0.00); K760(0.00); K10(0.00)  LDD0199  [10]
4-Iodoacetamidophenylacetylene
 Probe Info  		C126(0.00); C618(0.00); C572(0.00)  LDD0038  [11]
IA-alkyne
 Probe Info  		C618(0.00); C126(0.00)  LDD0036  [11]
Lodoacetamide azide
 Probe Info  		C126(0.00); C618(0.00); C329(0.00)  LDD0037  [11]
TFBX
 Probe Info  		N.A.  LDD0027  [12]
aHNE
 Probe Info  		N.A.  LDD0001  [13]
Compound 10
 Probe Info  		C126(0.00); C753(0.00)  LDD2216  [14]
Compound 11
 Probe Info  		N.A.  LDD2213  [14]
ENE
 Probe Info  		N.A.  LDD0006  [13]
IPM
 Probe Info  		N.A.  LDD0005  [13]
VSF
 Probe Info  		N.A.  LDD0007  [13]
Ox-W18
 Probe Info  		N.A.  LDD2175  [15]
Acrolein
 Probe Info  		N.A.  LDD0217  [16]
NAIA_5
 Probe Info  		C753(0.00); C618(0.00)  LDD2223  [17]
PAL-AfBPP Probe
Click To Hide/Show 3 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
FFF probe3
 Probe Info  		14.84  LDD0464  [18]
STS-1
 Probe Info  		N.A.  LDD0136  [19]
VE-P
 Probe Info  		N.A.  LDD0396  [20]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0025  4SU-RNA HEK-293T C329(2.68); C126(2.54)  LDD0168  [7]
 LDCM0026  4SU-RNA+native RNA HEK-293T C329(3.55); C126(2.54)  LDD0169  [7]
 LDCM0214  AC1 HCT 116 C126(1.01); C618(0.90)  LDD0531  [8]
 LDCM0215  AC10 HCT 116 C126(1.11); C618(0.83)  LDD0532  [8]
 LDCM0216  AC100 HCT 116 C126(1.04); C618(0.73)  LDD0533  [8]
 LDCM0217  AC101 HCT 116 C126(1.01); C618(0.71)  LDD0534  [8]
 LDCM0218  AC102 HCT 116 C126(1.09); C618(0.76)  LDD0535  [8]
 LDCM0219  AC103 HCT 116 C126(1.30); C618(0.51)  LDD0536  [8]
 LDCM0220  AC104 HCT 116 C126(1.19); C618(0.64)  LDD0537  [8]
 LDCM0221  AC105 HCT 116 C126(1.27); C618(0.61)  LDD0538  [8]
 LDCM0222  AC106 HCT 116 C126(1.14); C618(0.53)  LDD0539  [8]
 LDCM0223  AC107 HCT 116 C126(1.26); C618(0.69)  LDD0540  [8]
 LDCM0224  AC108 HCT 116 C126(0.98); C618(0.80)  LDD0541  [8]
 LDCM0225  AC109 HCT 116 C126(1.12); C618(0.83)  LDD0542  [8]
 LDCM0226  AC11 HCT 116 C126(1.18); C618(0.80)  LDD0543  [8]
 LDCM0227  AC110 HCT 116 C126(1.25); C618(0.73)  LDD0544  [8]
 LDCM0228  AC111 HCT 116 C126(1.15); C618(0.57)  LDD0545  [8]
 LDCM0229  AC112 HCT 116 C126(1.20); C618(0.53)  LDD0546  [8]
 LDCM0230  AC113 HCT 116 C126(1.07); C618(1.02)  LDD0547  [8]
 LDCM0231  AC114 HCT 116 C126(0.75); C618(0.79)  LDD0548  [8]
 LDCM0232  AC115 HCT 116 C126(0.92); C618(0.55)  LDD0549  [8]
 LDCM0233  AC116 HCT 116 C126(0.97); C618(0.59)  LDD0550  [8]
 LDCM0234  AC117 HCT 116 C126(0.97); C618(1.06)  LDD0551  [8]
 LDCM0235  AC118 HCT 116 C126(0.91); C618(0.90)  LDD0552  [8]
 LDCM0236  AC119 HCT 116 C126(1.35); C618(0.71)  LDD0553  [8]
 LDCM0237  AC12 HCT 116 C126(1.00); C618(1.07)  LDD0554  [8]
 LDCM0238  AC120 HCT 116 C126(0.92); C618(0.80)  LDD0555  [8]
 LDCM0239  AC121 HCT 116 C126(0.86); C618(1.02)  LDD0556  [8]
 LDCM0240  AC122 HCT 116 C126(0.87); C618(0.81)  LDD0557  [8]
 LDCM0241  AC123 HCT 116 C126(1.30); C618(1.10)  LDD0558  [8]
 LDCM0242  AC124 HCT 116 C126(0.83); C618(1.07)  LDD0559  [8]
 LDCM0243  AC125 HCT 116 C126(0.86); C618(0.81)  LDD0560  [8]
 LDCM0244  AC126 HCT 116 C126(0.88); C618(0.63)  LDD0561  [8]
 LDCM0245  AC127 HCT 116 C126(0.96); C618(0.69)  LDD0562  [8]
 LDCM0246  AC128 HCT 116 C126(1.19); C618(0.94)  LDD0563  [8]
 LDCM0247  AC129 HCT 116 C126(0.80); C618(1.65)  LDD0564  [8]
 LDCM0249  AC130 HCT 116 C126(1.14); C618(0.94)  LDD0566  [8]
 LDCM0250  AC131 HCT 116 C126(1.18); C618(1.47)  LDD0567  [8]
 LDCM0251  AC132 HCT 116 C126(0.96); C618(1.64)  LDD0568  [8]
 LDCM0252  AC133 HCT 116 C126(0.91); C618(1.01)  LDD0569  [8]
 LDCM0253  AC134 HCT 116 C126(0.99); C618(0.70)  LDD0570  [8]
 LDCM0254  AC135 HCT 116 C126(0.99); C618(0.78)  LDD0571  [8]
 LDCM0255  AC136 HCT 116 C126(0.92); C618(0.89)  LDD0572  [8]
 LDCM0256  AC137 HCT 116 C126(0.78); C618(1.32)  LDD0573  [8]
 LDCM0257  AC138 HCT 116 C126(1.04); C618(0.81)  LDD0574  [8]
 LDCM0258  AC139 HCT 116 C126(1.11); C618(0.85)  LDD0575  [8]
 LDCM0259  AC14 HCT 116 C126(1.07); C618(0.98)  LDD0576  [8]
 LDCM0260  AC140 HCT 116 C126(1.01); C618(0.70)  LDD0577  [8]
 LDCM0261  AC141 HCT 116 C126(0.90); C618(0.89)  LDD0578  [8]
 LDCM0262  AC142 HCT 116 C126(0.72); C618(1.69)  LDD0579  [8]
 LDCM0263  AC143 HCT 116 C126(1.11); C618(0.86)  LDD0580  [8]
 LDCM0264  AC144 HCT 116 C618(0.63); C126(1.47)  LDD0581  [8]
 LDCM0265  AC145 HCT 116 C618(0.90); C126(1.17)  LDD0582  [8]
 LDCM0266  AC146 HCT 116 C618(0.68); C126(1.36)  LDD0583  [8]
 LDCM0267  AC147 HCT 116 C618(0.61); C126(1.48)  LDD0584  [8]
 LDCM0268  AC148 HCT 116 C618(0.64); C126(1.98)  LDD0585  [8]
 LDCM0269  AC149 HCT 116 C618(0.47); C126(1.73)  LDD0586  [8]
 LDCM0270  AC15 HCT 116 C618(0.82); C126(1.21)  LDD0587  [8]
 LDCM0271  AC150 HCT 116 C618(0.89); C126(1.23)  LDD0588  [8]
 LDCM0272  AC151 HCT 116 C618(0.76); C126(1.32)  LDD0589  [8]
 LDCM0273  AC152 HCT 116 C618(0.63); C126(1.48)  LDD0590  [8]
 LDCM0274  AC153 HCT 116 C618(0.53); C126(2.00)  LDD0591  [8]
 LDCM0621  AC154 HCT 116 C126(1.44); C618(0.65)  LDD2158  [8]
 LDCM0622  AC155 HCT 116 C126(1.29); C618(0.66)  LDD2159  [8]
 LDCM0623  AC156 HCT 116 C126(1.28); C618(0.94)  LDD2160  [8]
 LDCM0624  AC157 HCT 116 C126(1.16); C618(1.01)  LDD2161  [8]
 LDCM0276  AC17 HCT 116 C618(1.04); C126(1.17)  LDD0593  [8]
 LDCM0277  AC18 HCT 116 C618(0.60); C126(1.58)  LDD0594  [8]
 LDCM0278  AC19 HCT 116 C618(0.98); C126(1.33)  LDD0595  [8]
 LDCM0279  AC2 HCT 116 C618(0.84); C126(0.93)  LDD0596  [8]
 LDCM0280  AC20 HCT 116 C618(0.97); C126(1.44)  LDD0597  [8]
 LDCM0281  AC21 HCT 116 C618(0.89); C126(1.22)  LDD0598  [8]
 LDCM0282  AC22 HCT 116 C618(1.01); C126(1.07)  LDD0599  [8]
 LDCM0283  AC23 HCT 116 C618(0.93); C126(1.25)  LDD0600  [8]
 LDCM0284  AC24 HCT 116 C618(1.15); C126(1.39)  LDD0601  [8]
 LDCM0285  AC25 HCT 116 C618(0.79); C126(1.13)  LDD0602  [8]
 LDCM0286  AC26 HCT 116 C618(0.65); C126(1.17)  LDD0603  [8]
 LDCM0287  AC27 HCT 116 C618(0.59); C126(1.29)  LDD0604  [8]
 LDCM0288  AC28 HCT 116 C618(0.57); C126(1.35)  LDD0605  [8]
 LDCM0289  AC29 HCT 116 C618(0.55); C126(1.21)  LDD0606  [8]
 LDCM0290  AC3 HCT 116 C618(0.91); C126(0.94)  LDD0607  [8]
 LDCM0291  AC30 HCT 116 C618(0.49); C126(1.43)  LDD0608  [8]
 LDCM0292  AC31 HCT 116 C618(0.62); C126(1.24)  LDD0609  [8]
 LDCM0293  AC32 HCT 116 C618(0.32); C126(1.45)  LDD0610  [8]
 LDCM0294  AC33 HCT 116 C618(0.41); C126(1.28)  LDD0611  [8]
 LDCM0295  AC34 HCT 116 C618(0.33); C126(1.63)  LDD0612  [8]
 LDCM0296  AC35 HCT 116 C126(0.85); C618(1.90)  LDD0613  [8]
 LDCM0297  AC36 HCT 116 C126(0.92); C618(1.65)  LDD0614  [8]
 LDCM0298  AC37 HCT 116 C126(0.88); C618(1.50)  LDD0615  [8]
 LDCM0299  AC38 HCT 116 C126(1.16); C618(1.39)  LDD0616  [8]
 LDCM0300  AC39 HCT 116 C618(1.04); C126(1.04)  LDD0617  [8]
 LDCM0301  AC4 HCT 116 C618(0.82); C126(0.92)  LDD0618  [8]
 LDCM0302  AC40 HCT 116 C618(0.85); C126(1.21)  LDD0619  [8]
 LDCM0303  AC41 HCT 116 C126(1.03); C618(1.21)  LDD0620  [8]
 LDCM0304  AC42 HCT 116 C618(0.96); C126(1.10)  LDD0621  [8]
 LDCM0305  AC43 HCT 116 C126(1.13); C618(1.15)  LDD0622  [8]
 LDCM0306  AC44 HCT 116 C618(1.01); C126(1.14)  LDD0623  [8]
 LDCM0307  AC45 HCT 116 C618(0.98); C126(1.33)  LDD0624  [8]
 LDCM0308  AC46 HCT 116 C126(1.01); C618(1.05)  LDD0625  [8]
 LDCM0309  AC47 HCT 116 C618(0.83); C126(0.90)  LDD0626  [8]
 LDCM0310  AC48 HCT 116 C126(0.91); C618(1.06)  LDD0627  [8]
 LDCM0311  AC49 HCT 116 C618(0.68); C126(1.32)  LDD0628  [8]
 LDCM0312  AC5 HCT 116 C618(0.81); C126(0.91)  LDD0629  [8]
 LDCM0313  AC50 HCT 116 C618(0.63); C126(1.20)  LDD0630  [8]
 LDCM0314  AC51 HCT 116 C126(0.82); C618(1.31)  LDD0631  [8]
 LDCM0315  AC52 HCT 116 C618(0.81); C126(0.93)  LDD0632  [8]
 LDCM0316  AC53 HCT 116 C618(0.67); C126(1.24)  LDD0633  [8]
 LDCM0317  AC54 HCT 116 C618(0.63); C126(1.10)  LDD0634  [8]
 LDCM0318  AC55 HCT 116 C618(0.74); C126(1.22)  LDD0635  [8]
 LDCM0319  AC56 HCT 116 C618(0.71); C126(1.51)  LDD0636  [8]
 LDCM0320  AC57 HCT 116 C618(0.67); C126(1.13)  LDD0637  [8]
 LDCM0321  AC58 HCT 116 C618(0.58); C126(1.41)  LDD0638  [8]
 LDCM0322  AC59 HCT 116 C618(0.61); C126(1.35)  LDD0639  [8]
 LDCM0323  AC6 HCT 116 C618(0.74); C126(1.19)  LDD0640  [8]
 LDCM0324  AC60 HCT 116 C618(0.62); C126(1.22)  LDD0641  [8]
 LDCM0325  AC61 HCT 116 C618(0.67); C126(1.11)  LDD0642  [8]
 LDCM0326  AC62 HCT 116 C618(0.68); C126(1.45)  LDD0643  [8]
 LDCM0327  AC63 HCT 116 C618(0.70); C126(1.22)  LDD0644  [8]
 LDCM0328  AC64 HCT 116 C618(0.64); C126(1.32)  LDD0645  [8]
 LDCM0329  AC65 HCT 116 C618(0.54); C126(1.06)  LDD0646  [8]
 LDCM0330  AC66 HCT 116 C618(0.64); C126(1.09)  LDD0647  [8]
 LDCM0331  AC67 HCT 116 C618(0.50); C126(1.31)  LDD0648  [8]
 LDCM0332  AC68 HCT 116 C618(0.61); C126(1.02)  LDD0649  [8]
 LDCM0333  AC69 HCT 116 C618(0.67); C126(1.17)  LDD0650  [8]
 LDCM0334  AC7 HCT 116 C618(0.89); C126(1.09)  LDD0651  [8]
 LDCM0335  AC70 HCT 116 C618(0.47); C126(1.17)  LDD0652  [8]
 LDCM0336  AC71 HCT 116 C618(0.95); C126(1.02)  LDD0653  [8]
 LDCM0337  AC72 HCT 116 C618(0.52); C126(1.00)  LDD0654  [8]
 LDCM0338  AC73 HCT 116 C126(1.81); C618(0.52)  LDD0655  [8]
 LDCM0339  AC74 HCT 116 C618(0.68); C126(1.56)  LDD0656  [8]
 LDCM0340  AC75 HCT 116 C618(0.56); C126(1.74)  LDD0657  [8]
 LDCM0341  AC76 HCT 116 C618(0.66); C126(1.15)  LDD0658  [8]
 LDCM0342  AC77 HCT 116 C618(0.56); C126(1.30)  LDD0659  [8]
 LDCM0343  AC78 HCT 116 C618(0.93); C126(1.11)  LDD0660  [8]
 LDCM0344  AC79 HCT 116 C618(0.58); C126(1.25)  LDD0661  [8]
 LDCM0345  AC8 HCT 116 C618(0.78); C126(1.11)  LDD0662  [8]
 LDCM0346  AC80 HCT 116 C618(0.75); C126(1.20)  LDD0663  [8]
 LDCM0347  AC81 HCT 116 C618(0.67); C126(1.19)  LDD0664  [8]
 LDCM0348  AC82 HCT 116 C618(0.72); C126(1.44)  LDD0665  [8]
 LDCM0349  AC83 HCT 116 C618(0.42); C126(1.54)  LDD0666  [8]
 LDCM0350  AC84 HCT 116 C618(0.41); C126(1.40)  LDD0667  [8]
 LDCM0351  AC85 HCT 116 C618(0.60); C126(1.44)  LDD0668  [8]
 LDCM0352  AC86 HCT 116 C618(0.58); C126(1.14)  LDD0669  [8]
 LDCM0353  AC87 HCT 116 C618(0.84); C126(1.02)  LDD0670  [8]
 LDCM0354  AC88 HCT 116 C618(0.66); C126(1.09)  LDD0671  [8]
 LDCM0355  AC89 HCT 116 C618(0.37); C126(1.34)  LDD0672  [8]
 LDCM0357  AC90 HCT 116 C126(0.94); C618(1.32)  LDD0674  [8]
 LDCM0358  AC91 HCT 116 C618(0.41); C126(1.65)  LDD0675  [8]
 LDCM0359  AC92 HCT 116 C618(0.40); C126(1.60)  LDD0676  [8]
 LDCM0360  AC93 HCT 116 C618(0.58); C126(1.34)  LDD0677  [8]
 LDCM0361  AC94 HCT 116 C618(0.79); C126(1.68)  LDD0678  [8]
 LDCM0362  AC95 HCT 116 C618(0.74); C126(1.17)  LDD0679  [8]
 LDCM0363  AC96 HCT 116 C618(0.60); C126(1.50)  LDD0680  [8]
 LDCM0364  AC97 HCT 116 C618(0.31); C126(1.46)  LDD0681  [8]
 LDCM0365  AC98 HCT 116 C618(0.40); C126(1.31)  LDD0682  [8]
 LDCM0366  AC99 HCT 116 C618(0.70); C126(1.06)  LDD0683  [8]
 LDCM0248  AKOS034007472 HCT 116 C126(1.02); C618(1.02)  LDD0565  [8]
 LDCM0356  AKOS034007680 HCT 116 C618(0.92); C126(1.07)  LDD0673  [8]
 LDCM0275  AKOS034007705 HCT 116 C618(0.48); C126(1.48)  LDD0592  [8]
 LDCM0156  Aniline NCI-H1299 11.53  LDD0403  [1]
 LDCM0020  ARS-1620 HCC44 C126(1.02)  LDD0078  [8]
 LDCM0630  CCW28-3 231MFP C126(1.20)  LDD2214  [21]
 LDCM0367  CL1 HCT 116 C618(1.09); C126(1.37)  LDD0684  [8]
 LDCM0368  CL10 HCT 116 C618(0.59); C126(0.77)  LDD0685  [8]
 LDCM0369  CL100 HCT 116 C618(0.78); C126(1.07)  LDD0686  [8]
 LDCM0370  CL101 HCT 116 C618(0.73); C126(1.31)  LDD0687  [8]
 LDCM0371  CL102 HCT 116 C618(1.02); C126(1.29)  LDD0688  [8]
 LDCM0372  CL103 HCT 116 C618(1.04); C126(2.50)  LDD0689  [8]
 LDCM0373  CL104 HCT 116 C618(0.96); C126(1.15)  LDD0690  [8]
 LDCM0374  CL105 HCT 116 C618(0.82); C126(2.52)  LDD0691  [8]
 LDCM0375  CL106 HCT 116 C618(0.60); C126(2.44)  LDD0692  [8]
 LDCM0376  CL107 HCT 116 C618(0.58); C126(1.60)  LDD0693  [8]
 LDCM0377  CL108 HCT 116 C618(0.55); C126(1.96)  LDD0694  [8]
 LDCM0378  CL109 HCT 116 C618(0.74); C126(1.64)  LDD0695  [8]
 LDCM0379  CL11 HCT 116 C618(0.80); C126(1.86)  LDD0696  [8]
 LDCM0380  CL110 HCT 116 C618(0.63); C126(4.57)  LDD0697  [8]
 LDCM0381  CL111 HCT 116 C618(0.75); C126(1.51)  LDD0698  [8]
 LDCM0382  CL112 HCT 116 C618(0.85); C126(1.16)  LDD0699  [8]
 LDCM0383  CL113 HCT 116 C618(0.38); C126(1.46)  LDD0700  [8]
 LDCM0384  CL114 HCT 116 C618(0.64); C126(3.31)  LDD0701  [8]
 LDCM0385  CL115 HCT 116 C618(0.54); C126(1.39)  LDD0702  [8]
 LDCM0386  CL116 HCT 116 C618(0.62); C126(1.25)  LDD0703  [8]
 LDCM0387  CL117 HCT 116 C618(0.86); C126(1.82)  LDD0704  [8]
 LDCM0388  CL118 HCT 116 C618(0.97); C126(1.07)  LDD0705  [8]
 LDCM0389  CL119 HCT 116 C618(0.80); C126(1.12)  LDD0706  [8]
 LDCM0390  CL12 HCT 116 C618(0.61); C126(0.87)  LDD0707  [8]
 LDCM0391  CL120 HCT 116 C126(0.96); C618(1.16)  LDD0708  [8]
 LDCM0392  CL121 HCT 116 C618(0.65); C126(0.89)  LDD0709  [8]
 LDCM0393  CL122 HCT 116 C618(0.88); C126(0.99)  LDD0710  [8]
 LDCM0394  CL123 HCT 116 C618(0.61); C126(1.36)  LDD0711  [8]
 LDCM0395  CL124 HCT 116 C618(0.62); C126(1.62)  LDD0712  [8]
 LDCM0396  CL125 HCT 116 C618(0.87); C126(0.98)  LDD0713  [8]
 LDCM0397  CL126 HCT 116 C618(0.80); C126(1.23)  LDD0714  [8]
 LDCM0398  CL127 HCT 116 C618(0.78); C126(1.01)  LDD0715  [8]
 LDCM0399  CL128 HCT 116 C618(0.60); C126(1.15)  LDD0716  [8]
 LDCM0400  CL13 HCT 116 C618(0.88); C126(0.91)  LDD0717  [8]
 LDCM0401  CL14 HCT 116 C618(0.75); C126(0.89)  LDD0718  [8]
 LDCM0402  CL15 HCT 116 C618(0.93); C126(1.68)  LDD0719  [8]
 LDCM0403  CL16 HCT 116 C618(0.73); C126(1.02)  LDD0720  [8]
 LDCM0404  CL17 HCT 116 C618(0.81); C126(1.24)  LDD0721  [8]
 LDCM0405  CL18 HCT 116 C618(0.70); C126(1.01)  LDD0722  [8]
 LDCM0406  CL19 HCT 116 C618(0.71); C126(1.09)  LDD0723  [8]
 LDCM0407  CL2 HCT 116 C618(1.04); C126(1.10)  LDD0724  [8]
 LDCM0408  CL20 HCT 116 C618(0.44); C126(1.15)  LDD0725  [8]
 LDCM0409  CL21 HCT 116 C618(0.52); C126(2.72)  LDD0726  [8]
 LDCM0410  CL22 HCT 116 C618(0.51); C126(1.52)  LDD0727  [8]
 LDCM0411  CL23 HCT 116 C618(0.45); C126(1.14)  LDD0728  [8]
 LDCM0412  CL24 HCT 116 C126(1.11); C618(0.44)  LDD0729  [8]
 LDCM0413  CL25 HCT 116 C126(1.32); C618(0.43)  LDD0730  [8]
 LDCM0414  CL26 HCT 116 C126(1.04); C618(0.50)  LDD0731  [8]
 LDCM0415  CL27 HCT 116 C126(0.98); C618(0.56)  LDD0732  [8]
 LDCM0416  CL28 HCT 116 C126(1.12); C618(0.44)  LDD0733  [8]
 LDCM0417  CL29 HCT 116 C126(1.10); C618(0.48)  LDD0734  [8]
 LDCM0418  CL3 HCT 116 C126(0.84); C618(0.89)  LDD0735  [8]
 LDCM0419  CL30 HCT 116 C126(1.17); C618(0.72)  LDD0736  [8]
 LDCM0420  CL31 HCT 116 C126(1.05); C618(0.80)  LDD0737  [8]
 LDCM0421  CL32 HCT 116 C126(1.31); C618(0.77)  LDD0738  [8]
 LDCM0422  CL33 HCT 116 C126(2.82); C618(0.69)  LDD0739  [8]
 LDCM0423  CL34 HCT 116 C126(1.65); C618(0.50)  LDD0740  [8]
 LDCM0424  CL35 HCT 116 C126(1.66); C618(0.55)  LDD0741  [8]
 LDCM0425  CL36 HCT 116 C126(1.82); C618(0.52)  LDD0742  [8]
 LDCM0426  CL37 HCT 116 C126(2.35); C618(0.53)  LDD0743  [8]
 LDCM0428  CL39 HCT 116 C126(1.61); C618(0.51)  LDD0745  [8]
 LDCM0429  CL4 HCT 116 C126(2.98); C618(0.87)  LDD0746  [8]
 LDCM0430  CL40 HCT 116 C126(1.27); C618(0.54)  LDD0747  [8]
 LDCM0431  CL41 HCT 116 C126(1.47); C618(0.55)  LDD0748  [8]
 LDCM0432  CL42 HCT 116 C126(2.14); C618(0.56)  LDD0749  [8]
 LDCM0433  CL43 HCT 116 C126(1.59); C618(0.56)  LDD0750  [8]
 LDCM0434  CL44 HCT 116 C126(1.62); C618(0.64)  LDD0751  [8]
 LDCM0435  CL45 HCT 116 C126(1.52); C618(0.57)  LDD0752  [8]
 LDCM0436  CL46 HCT 116 C126(1.01); C618(1.43)  LDD0753  [8]
 LDCM0437  CL47 HCT 116 C126(0.82); C618(1.24)  LDD0754  [8]
 LDCM0438  CL48 HCT 116 C126(0.91); C618(1.44)  LDD0755  [8]
 LDCM0439  CL49 HCT 116 C126(0.92); C618(1.06)  LDD0756  [8]
 LDCM0440  CL5 HCT 116 C126(0.83); C618(0.88)  LDD0757  [8]
 LDCM0441  CL50 HCT 116 C126(0.89); C618(1.26)  LDD0758  [8]
 LDCM0442  CL51 HCT 116 C126(1.04); C618(1.25)  LDD0759  [8]
 LDCM0443  CL52 HCT 116 C126(1.57); C618(1.15)  LDD0760  [8]
 LDCM0444  CL53 HCT 116 C126(1.20); C618(1.20)  LDD0761  [8]
 LDCM0445  CL54 HCT 116 C126(0.91); C618(1.40)  LDD0762  [8]
 LDCM0446  CL55 HCT 116 C126(0.74); C618(1.37)  LDD0763  [8]
 LDCM0447  CL56 HCT 116 C126(0.90); C618(0.97)  LDD0764  [8]
 LDCM0448  CL57 HCT 116 C126(2.25); C618(1.36)  LDD0765  [8]
 LDCM0449  CL58 HCT 116 C126(1.95); C618(1.27)  LDD0766  [8]
 LDCM0450  CL59 HCT 116 C126(0.82); C618(1.10)  LDD0767  [8]
 LDCM0451  CL6 HCT 116 C126(2.92); C618(0.73)  LDD0768  [8]
 LDCM0452  CL60 HCT 116 C126(0.83); C618(1.02)  LDD0769  [8]
 LDCM0453  CL61 HCT 116 C126(1.16); C618(0.86)  LDD0770  [8]
 LDCM0454  CL62 HCT 116 C126(1.10); C618(0.79)  LDD0771  [8]
 LDCM0455  CL63 HCT 116 C126(1.12); C618(0.69)  LDD0772  [8]
 LDCM0456  CL64 HCT 116 C126(2.11); C618(0.57)  LDD0773  [8]
 LDCM0457  CL65 HCT 116 C126(1.03); C618(0.86)  LDD0774  [8]
 LDCM0458  CL66 HCT 116 C126(1.31); C618(0.49)  LDD0775  [8]
 LDCM0459  CL67 HCT 116 C126(1.41); C618(0.58)  LDD0776  [8]
 LDCM0460  CL68 HCT 116 C126(1.37); C618(0.55)  LDD0777  [8]
 LDCM0461  CL69 HCT 116 C126(1.07); C618(0.76)  LDD0778  [8]
 LDCM0462  CL7 HCT 116 C126(1.04); C618(0.82)  LDD0779  [8]
 LDCM0463  CL70 HCT 116 C126(1.10); C618(0.62)  LDD0780  [8]
 LDCM0464  CL71 HCT 116 C126(1.19); C618(0.59)  LDD0781  [8]
 LDCM0465  CL72 HCT 116 C126(0.97); C618(0.89)  LDD0782  [8]
 LDCM0466  CL73 HCT 116 C126(1.95); C618(0.57)  LDD0783  [8]
 LDCM0467  CL74 HCT 116 C126(1.56); C618(0.57)  LDD0784  [8]
 LDCM0469  CL76 HCT 116 C126(1.22); C618(0.73)  LDD0786  [8]
 LDCM0470  CL77 HCT 116 C126(2.36); C618(0.72)  LDD0787  [8]
 LDCM0471  CL78 HCT 116 C126(1.21); C618(0.65)  LDD0788  [8]
 LDCM0472  CL79 HCT 116 C126(1.40); C618(0.48)  LDD0789  [8]
 LDCM0473  CL8 HCT 116 C126(10.49); C618(0.50)  LDD0790  [8]
 LDCM0474  CL80 HCT 116 C126(1.34); C618(0.81)  LDD0791  [8]
 LDCM0475  CL81 HCT 116 C126(1.35); C618(0.66)  LDD0792  [8]
 LDCM0476  CL82 HCT 116 C126(1.83); C618(0.61)  LDD0793  [8]
 LDCM0477  CL83 HCT 116 C126(1.94); C618(0.54)  LDD0794  [8]
 LDCM0478  CL84 HCT 116 C126(7.05); C618(0.47)  LDD0795  [8]
 LDCM0479  CL85 HCT 116 C126(1.31); C618(0.58)  LDD0796  [8]
 LDCM0480  CL86 HCT 116 C126(1.21); C618(0.91)  LDD0797  [8]
 LDCM0481  CL87 HCT 116 C126(1.53); C618(0.69)  LDD0798  [8]
 LDCM0482  CL88 HCT 116 C126(1.66); C618(0.55)  LDD0799  [8]
 LDCM0483  CL89 HCT 116 C126(2.05); C618(0.52)  LDD0800  [8]
 LDCM0484  CL9 HCT 116 C126(1.15); C618(0.68)  LDD0801  [8]
 LDCM0485  CL90 HCT 116 C126(5.07); C618(1.06)  LDD0802  [8]
 LDCM0486  CL91 HCT 116 C126(1.05); C618(0.91)  LDD0803  [8]
 LDCM0487  CL92 HCT 116 C126(1.06); C618(0.96)  LDD0804  [8]
 LDCM0488  CL93 HCT 116 C126(1.16); C618(1.01)  LDD0805  [8]
 LDCM0489  CL94 HCT 116 C126(1.36); C618(0.80)  LDD0806  [8]
 LDCM0490  CL95 HCT 116 C126(2.05); C618(0.76)  LDD0807  [8]
 LDCM0491  CL96 HCT 116 C126(1.60); C618(0.78)  LDD0808  [8]
 LDCM0492  CL97 HCT 116 C126(1.34); C618(0.73)  LDD0809  [8]
 LDCM0493  CL98 HCT 116 C126(1.11); C618(0.74)  LDD0810  [8]
 LDCM0494  CL99 HCT 116 C126(0.89); C618(0.81)  LDD0811  [8]
 LDCM0191  Compound 21 HEK-293T 6.84  LDD0508  [18]
 LDCM0190  Compound 34 HEK-293T 7.13  LDD0510  [18]
 LDCM0192  Compound 35 HEK-293T 4.88  LDD0509  [18]
 LDCM0193  Compound 36 HEK-293T 7.10  LDD0511  [18]
 LDCM0495  E2913 HEK-293T C126(1.22); C329(0.99); C572(1.14)  LDD1698  [22]
 LDCM0213  Electrophilic fragment 2 MDA-MB-231 C753(2.05); C618(1.72); C126(1.07)  LDD1702  [6]
 LDCM0625  F8 Ramos C126(1.43)  LDD2187  [23]
 LDCM0572  Fragment10 MDA-MB-231 C126(1.73)  LDD1389  [24]
 LDCM0573  Fragment11 MDA-MB-231 C126(4.90)  LDD1391  [24]
 LDCM0574  Fragment12 MDA-MB-231 C126(20.00)  LDD1468  [24]
 LDCM0575  Fragment13 Ramos C126(0.98)  LDD2192  [23]
 LDCM0576  Fragment14 MDA-MB-231 C126(1.20)  LDD1397  [24]
 LDCM0579  Fragment20 MDA-MB-231 C126(1.09)  LDD1402  [24]
 LDCM0580  Fragment21 MDA-MB-231 C126(0.84)  LDD1404  [24]
 LDCM0581  Fragment22 MDA-MB-231 C126(1.12)  LDD1406  [24]
 LDCM0582  Fragment23 MDA-MB-231 C126(0.96)  LDD1408  [24]
 LDCM0583  Fragment24 Ramos C126(1.12)  LDD1410  [24]
 LDCM0584  Fragment25 MDA-MB-231 C126(1.26)  LDD1411  [24]
 LDCM0578  Fragment27 MDA-MB-231 C126(0.72)  LDD1401  [24]
 LDCM0586  Fragment28 MDA-MB-231 C126(0.98)  LDD1415  [24]
 LDCM0587  Fragment29 MDA-MB-231 C126(1.01)  LDD1417  [24]
 LDCM0588  Fragment30 Ramos C126(0.70)  LDD2199  [23]
 LDCM0589  Fragment31 MDA-MB-231 C126(0.84)  LDD1421  [24]
 LDCM0590  Fragment32 MDA-MB-231 C126(20.00)  LDD1423  [24]
 LDCM0468  Fragment33 HCT 116 C126(1.06); C618(0.66)  LDD0785  [8]
 LDCM0593  Fragment35 MDA-MB-231 C126(0.78)  LDD1429  [24]
 LDCM0594  Fragment36 MDA-MB-231 C126(1.53)  LDD1431  [24]
 LDCM0596  Fragment38 MDA-MB-231 C126(0.99)  LDD1433  [24]
 LDCM0566  Fragment4 MDA-MB-231 C126(1.84)  LDD1378  [24]
 LDCM0598  Fragment40 MDA-MB-231 C126(0.74)  LDD1436  [24]
 LDCM0599  Fragment41 MDA-MB-231 C126(0.98)  LDD1438  [24]
 LDCM0601  Fragment43 MDA-MB-231 C126(2.21)  LDD1441  [24]
 LDCM0603  Fragment45 MDA-MB-231 C126(20.00)  LDD1444  [24]
 LDCM0604  Fragment46 MDA-MB-231 C126(0.84)  LDD1445  [24]
 LDCM0605  Fragment47 MDA-MB-231 C126(0.74)  LDD1446  [24]
 LDCM0427  Fragment51 HCT 116 C126(1.64); C618(0.51)  LDD0744  [8]
 LDCM0610  Fragment52 MDA-MB-231 C126(0.98)  LDD1452  [24]
 LDCM0611  Fragment53 MDA-MB-231 C126(1.02)  LDD1454  [24]
 LDCM0613  Fragment55 MDA-MB-231 C126(2.26)  LDD1457  [24]
 LDCM0614  Fragment56 MDA-MB-231 C126(0.99)  LDD1458  [24]
 LDCM0568  Fragment6 MDA-MB-231 C126(1.46)  LDD1382  [24]
 LDCM0569  Fragment7 MDA-MB-231 C126(2.03)  LDD1383  [24]
 LDCM0570  Fragment8 MDA-MB-231 C126(1.48)  LDD1385  [24]
 LDCM0571  Fragment9 MDA-MB-231 C126(0.75)  LDD1387  [24]
 LDCM0022  KB02 HCT 116 C126(6.08)  LDD0080  [8]
 LDCM0023  KB03 HCT 116 C126(1.31)  LDD0081  [8]
 LDCM0024  KB05 HCT 116 C126(1.27)  LDD0082  [8]
 LDCM0516  Nucleophilic fragment 21a MDA-MB-231 C618(1.15)  LDD2109  [6]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C618(1.14)  LDD2125  [6]
 LDCM0543  Nucleophilic fragment 38 MDA-MB-231 C618(4.02)  LDD2136  [6]
 LDCM0544  Nucleophilic fragment 39 MDA-MB-231 C618(1.57)  LDD2137  [6]
 LDCM0131  RA190 MM1.R C126(1.20); C329(0.99)  LDD0304  [25]
 LDCM0112  W16 Hep-G2 C126(2.75)  LDD0239  [9]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Other
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Lipid transferase CIDEB (CIDEB) CIDE family Q9UHD4

References

1 Quantitative and Site-Specific Chemoproteomic Profiling of Targets of Acrolein. Chem Res Toxicol. 2019 Mar 18;32(3):467-473. doi: 10.1021/acs.chemrestox.8b00343. Epub 2019 Jan 15.
2 2-Ethynylbenzaldehyde-Based, Lysine-Targeting Irreversible Covalent Inhibitors for Protein Kinases and Nonkinases. J Am Chem Soc. 2023 Feb 12. doi: 10.1021/jacs.2c11595. Online ahead of print.
Mass spectrometry data entry: PXD037665
3 Cyclopropenone, Cyclopropeniminium Ion, and Cyclopropenethione as Novel Electrophilic Warheads for Potential Target Discovery of Triple-Negative Breast Cancer. J Med Chem. 2023 Feb 23;66(4):2851-2864. doi: 10.1021/acs.jmedchem.2c01889. Epub 2023 Feb 10.
4 Chemoproteomic profiling of kinases in live cells using electrophilic sulfonyl triazole probes. Chem Sci. 2021 Jan 21;12(9):3295-3307. doi: 10.1039/d0sc06623k.
5 Global profiling of lysine reactivity and ligandability in the human proteome. Nat Chem. 2017 Dec;9(12):1181-1190. doi: 10.1038/nchem.2826. Epub 2017 Jul 31.
6 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
7 Chemoproteomic capture of RNA binding activity in living cells. Nat Commun. 2023 Oct 7;14(1):6282. doi: 10.1038/s41467-023-41844-z.
Mass spectrometry data entry: PXD044625
8 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
9 Oxidant-Induced Bioconjugation for Protein Labeling in Live Cells. ACS Chem Biol. 2023 Jan 20;18(1):112-122. doi: 10.1021/acschembio.2c00740. Epub 2022 Dec 21.
10 Targeted Proteomic Approaches for Proteome-Wide Characterizations of the AMP-Binding Capacities of Kinases. J Proteome Res. 2022 Aug 5;21(8):2063-2070. doi: 10.1021/acs.jproteome.2c00225. Epub 2022 Jul 12.
11 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
12 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
13 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
14 Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling. Anal Chem. 2021 Feb 2;93(4):2610-2618. doi: 10.1021/acs.analchem.0c04726. Epub 2021 Jan 20.
Mass spectrometry data entry: PXD022279
15 Oxidative cyclization reagents reveal tryptophan cation- interactions. Nature. 2024 Mar;627(8004):680-687. doi: 10.1038/s41586-024-07140-6. Epub 2024 Mar 6.
Mass spectrometry data entry: PXD001377 , PXD005252
16 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
17 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
18 Ligand and Target Discovery by Fragment-Based Screening in Human Cells. Cell. 2017 Jan 26;168(3):527-541.e29. doi: 10.1016/j.cell.2016.12.029. Epub 2017 Jan 19.
19 Design and synthesis of minimalist terminal alkyne-containing diazirine photo-crosslinkers and their incorporation into kinase inhibitors for cell- and tissue-based proteome profiling. Angew Chem Int Ed Engl. 2013 Aug 12;52(33):8551-6. doi: 10.1002/anie.201300683. Epub 2013 Jun 10.
20 Pharmacological Targeting of Vacuolar H(+)-ATPase via Subunit V1G Combats Multidrug-Resistant Cancer. Cell Chem Biol. 2020 Nov 19;27(11):1359-1370.e8. doi: 10.1016/j.chembiol.2020.06.011. Epub 2020 Jul 9.
21 Covalent Ligand Screening Uncovers a RNF4 E3 Ligase Recruiter for Targeted Protein Degradation Applications. ACS Chem Biol. 2019 Nov 15;14(11):2430-2440. doi: 10.1021/acschembio.8b01083. Epub 2019 May 13.
22 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
23 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
24 Proteome-wide covalent ligand discovery in native biological systems. Nature. 2016 Jun 23;534(7608):570-4. doi: 10.1038/nature18002. Epub 2016 Jun 15.
25 Physical and Functional Analysis of the Putative Rpn13 Inhibitor RA190. Cell Chem Biol. 2020 Nov 19;27(11):1371-1382.e6. doi: 10.1016/j.chembiol.2020.08.007. Epub 2020 Aug 27.