General Information of Target

Target ID LDTP11634
Target Name Derlin-2 (DERL2)
Gene Name DERL2
Gene ID 51009
Synonyms
DER2; FLANA; Derlin-2; Degradation in endoplasmic reticulum protein 2; DERtrin-2; Der1-like protein 2; F-LAN-1; F-LANa
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MHRLIFVYTLICANFCSCRDTSATPQSASIKALRNANLRRDESNHLTDLYRRDETIQVKG
NGYVQSPRFPNSYPRNLLLTWRLHSQENTRIQLVFDNQFGLEEAENDICRYDFVEVEDIS
ETSTIIRGRWCGHKEVPPRIKSRTNQIKITFKSDDYFVAKPGFKIYYSLLEDFQPAAASE
TNWESVTSSISGVSYNSPSVTDPTLIADALDKKIAEFDTVEDLLKYFNPESWQEDLENMY
LDTPRYRGRSYHDRKSKVDLDRLNDDAKRYSCTPRNYSVNIREELKLANVVFFPRCLLVQ
RCGGNCGCGTVNWRSCTCNSGKTVKKYHEVLQFEPGHIKRRGRAKTMALVDIQLDHHERC
DCICSSRPPR
Target Bioclass
Transporter and channel
Family
Derlin family
Subcellular location
Endoplasmic reticulum membrane
Function
Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal glycoproteins, but not that of misfolded nonglycoproteins. May act by forming a channel that allows the retrotranslocation of misfolded glycoproteins into the cytosol where they are ubiquitinated and degraded by the proteasome. May mediate the interaction between VCP and misfolded glycoproteins. May also be involved in endoplasmic reticulum stress-induced pre-emptive quality control, a mechanism that selectively attenuates the translocation of newly synthesized proteins into the endoplasmic reticulum and reroutes them to the cytosol for proteasomal degradation.; (Microbial infection) In contrast to DERL1, it is not involved in the degradation of MHC class I heavy chains following infection by cytomegaloviruses.
Uniprot ID
Q9GZP9
Ensemble ID
ENST00000158771.9
HGNC ID
HGNC:17943

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 4 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
TH211
 Probe Info 
Y218(7.74)  LDD0260  [1]
C-Sul
 Probe Info 
19.58  LDD0066  [2]
STPyne
 Probe Info 
K200(6.25)  LDD0277  [3]
AOyne
 Probe Info 
15.00  LDD0443  [4]
PAL-AfBPP Probe
Click To Hide/Show 25 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
C091
 Probe Info 
11.63  LDD1782  [5]
C092
 Probe Info 
18.51  LDD1783  [5]
C094
 Probe Info 
47.18  LDD1785  [5]
C106
 Probe Info 
24.25  LDD1793  [5]
C107
 Probe Info 
6.77  LDD1794  [5]
C108
 Probe Info 
10.13  LDD1795  [5]
C112
 Probe Info 
27.67  LDD1799  [5]
C134
 Probe Info 
24.93  LDD1816  [5]
C135
 Probe Info 
10.41  LDD1817  [5]
C143
 Probe Info 
14.03  LDD1825  [5]
C153
 Probe Info 
23.75  LDD1834  [5]
C161
 Probe Info 
11.16  LDD1841  [5]
C201
 Probe Info 
40.22  LDD1877  [5]
C206
 Probe Info 
17.88  LDD1881  [5]
C220
 Probe Info 
20.11  LDD1894  [5]
C252
 Probe Info 
13.00  LDD1925  [5]
C314
 Probe Info 
12.30  LDD1981  [5]
C349
 Probe Info 
8.51  LDD2010  [5]
C355
 Probe Info 
25.11  LDD2016  [5]
C362
 Probe Info 
31.56  LDD2023  [5]
C367
 Probe Info 
6.28  LDD2028  [5]
C383
 Probe Info 
11.00  LDD2042  [5]
C388
 Probe Info 
50.21  LDD2047  [5]
C407
 Probe Info 
20.53  LDD2064  [5]
BD-F
 Probe Info 
Y10(0.00); E9(0.00); L8(0.00)  LDD0024  [6]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Tyrosine-protein phosphatase non-receptor type 9 (PTPN9) Protein-tyrosine phosphatase family P43378
Transporter and channel
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
FXYD domain-containing ion transport regulator 6 (FXYD6) FXYD family Q9H0Q3
Other
Click To Hide/Show 6 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Keratin-associated protein 10-7 (KRTAP10-7) KRTAP type 10 family P60409
Keratin-associated protein 10-8 (KRTAP10-8) KRTAP type 10 family P60410
55 kDa erythrocyte membrane protein (MPP1) MAGUK family Q00013
Putative ribosome-binding factor A, mitochondrial (RBFA) RbfA family Q8N0V3
Vesicle transport protein SFT2A (SFT2D1) SFT2 family Q8WV19
Diablo IAP-binding mitochondrial protein (DIABLO) . Q9NR28

References

1 Chemoproteomic profiling of kinases in live cells using electrophilic sulfonyl triazole probes. Chem Sci. 2021 Jan 21;12(9):3295-3307. doi: 10.1039/d0sc06623k.
2 Low-Toxicity Sulfonium-Based Probes for Cysteine-Specific Profiling in Live Cells. Anal Chem. 2022 Mar 15;94(10):4366-4372. doi: 10.1021/acs.analchem.1c05129. Epub 2022 Mar 4.
3 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
4 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
5 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587
6 Evaluation of fully-functionalized diazirine tags for chemical proteomic applications. Chem Sci. 2021 May 7;12(22):7839-7847. doi: 10.1039/d1sc01360b.
Mass spectrometry data entry: PXD025652