General Information of Experiment

Probe Name C060  Probe Info 
Probe concentration Probe:50uM; negative probe:50uM
Criteria Quantification: AfBPP Probe vs Negative Probe
Quantitative Method
TMT
In Vivo Experiment Model Model Type Living cell
Derived Tissue Peripheral blood
Disease Model Normal
Model Name Human normal cells (HEK-293T)
Note Negative probe:C#CCCC1(CCC(NC)=O)N=N1

Interaction Altas of This Experiment [1]

Enzyme
Click to Show/Hide to Show 19 Protein Related to This Bioclass
Target ID Target Name Binding Ratio
 LDTP15422  Prostaglandin reductase 3 (PTGR3) 35.3
 LDTP13282  Prenylcysteine oxidase 1 (PCYOX1) 15.2
 LDTP16007  Lipid droplet-associated hydrolase (LDAH) 14.9
 LDTP02175  Epoxide hydrolase 1 (EPHX1) 12.0
 LDTP13358  Leucyl-cystinyl aminopeptidase (LNPEP) 8.5
 LDTP12020  Histone-lysine N-methyltransferase SMYD3 (SMYD3) 8.2
 LDTP04285  Proteasome subunit beta type-2 (PSMB2) 7.9
 LDTP00832  NADH dehydrogenase 1 beta subcomplex subunit 3 (NDUFB3) 7.5
 LDTP03842  Squalene synthase (FDFT1) 7.4
 LDTP07620  Peroxisomal N(1)-acetyl-spermine/spermidine oxidase (PAOX) 6.8
 LDTP10188  FAD-dependent oxidoreductase domain-containing protein 1 (FOXRED1) 6.7
 LDTP01769  Dihydrofolate reductase (DHFR) 6.6
 LDTP09043  Lysine-specific histone demethylase 2 (KDM1B) 6.4
 LDTP16032  Retinoid-inducible serine carboxypeptidase (SCPEP1) 6.2
 LDTP06750  Prolyl 3-hydroxylase 1 (P3H1) 5.7
 LDTP12363  Lysophosphatidic acid phosphatase type 6 (ACP6) 5.4
 LDTP00697  Cytochrome b5 type B (CYB5B) 5.1
 LDTP04004  Lysosomal Pro-X carboxypeptidase (PRCP) 5.1
 LDTP03787  Choline kinase alpha (CHKA) 5.1
Transporter and channel
Click to Show/Hide to Show 15 Protein Related to This Bioclass
Target ID Target Name Binding Ratio
 LDTP10913  Mitochondrial import inner membrane translocase subunit Tim17-A (TIMM17A) 22.3
 LDTP16069  Peroxisomal membrane protein 2 (PXMP2) 11.2
 LDTP07236  Protein GPR107 (GPR107) 11.0
 LDTP03132  Voltage-dependent anion-selective channel protein 1 (VDAC1) 10.9
 LDTP04071  Voltage-dependent anion-selective channel protein 2 (VDAC2) 9.8
 LDTP01059  Mitochondrial import inner membrane translocase subunit Tim17-B (TIMM17B) 8.7
 LDTP02724  Cytochrome c oxidase subunit 7A2, mitochondrial (COX7A2) 7.9
 LDTP03277  ER lumen protein-retaining receptor 1 (KDELR1) 7.6
 LDTP09547  Scavenger receptor class B member 1 (SCARB1) 7.5
 LDTP00865  Mitochondrial carnitine/acylcarnitine carrier protein (SLC25A20) 7.0
 LDTP04033  Translocon-associated protein subunit alpha (SSR1) 6.6
 LDTP06945  Sigma intracellular receptor 2 (TMEM97) 6.3
 LDTP06426  Translocating chain-associated membrane protein 1 (TRAM1) 5.9
 LDTP08016  Proton-coupled amino acid transporter 1 (SLC36A1) 5.7
 LDTP17641  Solute carrier family 35 member F2 (SLC35F2) 5.6
Other
Click to Show/Hide to Show 14 Protein Related to This Bioclass
Target ID Target Name Binding Ratio
 LDTP12565  Mitochondrial import receptor subunit TOM22 homolog (TOMM22) 32.9
 LDTP13828  Endoplasmic reticulum-Golgi intermediate compartment protein 3 (ERGIC3) 14.5
 LDTP05160  Nucleobindin-2 (NUCB2) 12.5
 LDTP14486  Clustered mitochondria protein homolog (CLUH) 10.6
 LDTP05375  Nucleobindin-1 (NUCB1) 9.1
 LDTP15623  Neuferricin (CYB5D2) 8.8
 LDTP13755  Brain-specific angiogenesis inhibitor 1-associated protein 2 (BAIAP2) 7.0
 LDTP00105  Protein unc-119 homolog B (UNC119B) 6.7
 LDTP16080  Protein FAM114A2 (FAM114A2) 6.4
 LDTP13606  Mammalian ependymin-related protein 1 (EPDR1) 5.9
 LDTP11076  Apolipoprotein L2 (APOL2) 5.3
 LDTP18272  Transmembrane protein 209 (TMEM209) 5.2
 LDTP08594  Negative elongation factor C/D (NELFCD) 5.0
 LDTP16006  Optic atrophy 3 protein (OPA3) 5.0

References

1 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587