Details of the Target

General Information of Target

Target ID LDTP06839
Target Name NAD kinase 2, mitochondrial (NADK2)
Gene Name NADK2
Gene ID 133686
Synonyms
C5orf33; MNADK; NADKD1; NAD kinase 2, mitochondrial; EC 2.7.1.23; Mitochondrial NAD kinase; NAD kinase domain-containing protein 1, mitochondrial
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
Sequence
MTCYRGFLLGSCCRVAGGRAAALRGPGAGGPAARPRLGGDGGGRRHLGQGQPRELAGCGS
RADGGFRPSRVVVVAKTTRYEFEQQRYRYAELSEEDLKQLLALKGSSYSGLLERHHIHTK
NVEHIIDSLRNEGIEVRLVKRREYDEETVRWADAVIAAGGDGTMLLAASKVLDRLKPVIG
VNTDPERSEGHLCLPVRYTHSFPEALQKFYRGEFRWLWRQRIRLYLEGTGINPVPVDLHE
QQLSLNQHNRALNIERAHDERSEASGPQLLPVRALNEVFIGESLSSRASYYEISVDDGPW
EKQKSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQGNLSLPLNRELVEKVTNEY
NESLLYSPEEPKILFSIREPIANRVFSSSRQRCFSSKVCVRSRCWDACMVVDGGTSFEFN
DGAIASMMINKEDELRTVLLEQ
Target Bioclass
Enzyme
Family
NAD kinase family
Subcellular location
Mitochondrion
Function
Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor. Also has weak NADH kinase activity in vitro; however NADH kinase activity is much weaker than the NAD(+) kinase activity and may not be relevant in vivo.
Uniprot ID
Q4G0N4
Ensemble ID
ENST00000282512.7
HGNC ID
HGNC:26404

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
HCC1954 SNV: p.R114Q DBIA    Probe Info 
NCIH1155 SNV: p.V122I DBIA    Probe Info 

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 27 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info  		15.00  LDD0402  [1]
N1
 Probe Info  		100.00  LDD0242  [2]
Probe 1
 Probe Info  		Y80(15.55); Y89(34.42); Y360(17.50); Y366(13.94)  LDD3495  [3]
P11
 Probe Info  		12.09  LDD0201  [4]
BTD
 Probe Info  		C58(0.84)  LDD2092  [5]
Sulforaphane-probe2
 Probe Info  		1.57  LDD0160  [6]
AHL-Pu-1
 Probe Info  		C193(6.10)  LDD0168  [7]
DBIA
 Probe Info  		C311(1.49)  LDD0080  [8]
5E-2FA
 Probe Info  		N.A.  LDD2235  [9]
ATP probe
 Probe Info  		K76(0.00); K304(0.00)  LDD0199  [10]
4-Iodoacetamidophenylacetylene
 Probe Info  		C311(0.00); C58(0.00)  LDD0038  [11]
IA-alkyne
 Probe Info  		C58(0.00); C193(0.00); C311(0.00)  LDD0036  [11]
Lodoacetamide azide
 Probe Info  		C193(0.00); C311(0.00)  LDD0037  [11]
Compound 10
 Probe Info  		N.A.  LDD2216  [12]
IPM
 Probe Info  		N.A.  LDD0005  [13]
NHS
 Probe Info  		N.A.  LDD0010  [13]
SF
 Probe Info  		N.A.  LDD0028  [14]
STPyne
 Probe Info  		N.A.  LDD0009  [13]
TFBX
 Probe Info  		C311(0.00); C193(0.00); C58(0.00)  LDD0148  [15]
Phosphinate-6
 Probe Info  		N.A.  LDD0018  [16]
Acrolein
 Probe Info  		C311(0.00); C193(0.00)  LDD0217  [17]
Cinnamaldehyde
 Probe Info  		N.A.  LDD0220  [17]
Crotonaldehyde
 Probe Info  		C193(0.00); C311(0.00)  LDD0219  [17]
Methacrolein
 Probe Info  		C193(0.00); C58(0.00); C311(0.00)  LDD0218  [17]
W1
 Probe Info  		N.A.  LDD0236  [18]
AOyne
 Probe Info  		15.00  LDD0443  [19]
NAIA_5
 Probe Info  		N.A.  LDD2223  [20]
PAL-AfBPP Probe
Click To Hide/Show 9 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
C017
 Probe Info  		6.54  LDD1725  [21]
C131
 Probe Info  		23.92  LDD1813  [21]
C235
 Probe Info  		22.32  LDD1908  [21]
C382
 Probe Info  		8.94  LDD2041  [21]
FFF probe12
 Probe Info  		17.27  LDD0473  [22]
FFF probe13
 Probe Info  		20.00  LDD0475  [22]
FFF probe3
 Probe Info  		20.00  LDD0464  [22]
STS-1
 Probe Info  		N.A.  LDD0137  [23]
STS-2
 Probe Info  		N.A.  LDD0139  [23]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0548  1-(4-(Benzo[d][1,3]dioxol-5-ylmethyl)piperazin-1-yl)-2-nitroethan-1-one MDA-MB-231 C58(0.81); C193(0.30)  LDD2142  [5]
 LDCM0519  1-(6-methoxy-3,4-dihydroquinolin-1(2H)-yl)-2-nitroethan-1-one MDA-MB-231 C58(0.88)  LDD2112  [5]
 LDCM0524  2-Cyano-N-(2-morpholin-4-yl-ethyl)-acetamide MDA-MB-231 C193(0.65)  LDD2117  [5]
 LDCM0558  2-Cyano-N-phenylacetamide MDA-MB-231 C193(0.88)  LDD2152  [5]
 LDCM0510  3-(4-(Hydroxydiphenylmethyl)piperidin-1-yl)-3-oxopropanenitrile MDA-MB-231 C58(1.10)  LDD2103  [5]
 LDCM0025  4SU-RNA HEK-293T C193(6.10)  LDD0168  [7]
 LDCM0026  4SU-RNA+native RNA HEK-293T C193(7.62)  LDD0169  [7]
 LDCM0214  AC1 HCT 116 C311(1.07); C58(1.32)  LDD0531  [8]
 LDCM0215  AC10 HCT 116 C58(1.02)  LDD0532  [8]
 LDCM0216  AC100 HCT 116 C58(1.46)  LDD0533  [8]
 LDCM0217  AC101 HCT 116 C58(1.45)  LDD0534  [8]
 LDCM0218  AC102 HCT 116 C58(1.56)  LDD0535  [8]
 LDCM0219  AC103 HCT 116 C58(1.93)  LDD0536  [8]
 LDCM0220  AC104 HCT 116 C58(1.32)  LDD0537  [8]
 LDCM0221  AC105 HCT 116 C58(1.59)  LDD0538  [8]
 LDCM0222  AC106 HCT 116 C58(1.69)  LDD0539  [8]
 LDCM0223  AC107 HCT 116 C58(1.12)  LDD0540  [8]
 LDCM0224  AC108 HCT 116 C58(0.85)  LDD0541  [8]
 LDCM0225  AC109 HCT 116 C58(0.83)  LDD0542  [8]
 LDCM0226  AC11 HCT 116 C58(1.04)  LDD0543  [8]
 LDCM0227  AC110 HCT 116 C58(1.17)  LDD0544  [8]
 LDCM0228  AC111 HCT 116 C58(1.13)  LDD0545  [8]
 LDCM0229  AC112 HCT 116 C58(1.01)  LDD0546  [8]
 LDCM0230  AC113 HCT 116 C58(0.85)  LDD0547  [8]
 LDCM0231  AC114 HCT 116 C58(1.06)  LDD0548  [8]
 LDCM0232  AC115 HCT 116 C58(1.00)  LDD0549  [8]
 LDCM0233  AC116 HCT 116 C58(1.12)  LDD0550  [8]
 LDCM0234  AC117 HCT 116 C58(1.22)  LDD0551  [8]
 LDCM0235  AC118 HCT 116 C58(1.23)  LDD0552  [8]
 LDCM0236  AC119 HCT 116 C58(1.10)  LDD0553  [8]
 LDCM0237  AC12 HCT 116 C58(1.03)  LDD0554  [8]
 LDCM0238  AC120 HCT 116 C58(0.96)  LDD0555  [8]
 LDCM0239  AC121 HCT 116 C58(1.09)  LDD0556  [8]
 LDCM0240  AC122 HCT 116 C58(0.94)  LDD0557  [8]
 LDCM0241  AC123 HCT 116 C58(1.13)  LDD0558  [8]
 LDCM0242  AC124 HCT 116 C58(0.93)  LDD0559  [8]
 LDCM0243  AC125 HCT 116 C58(1.07)  LDD0560  [8]
 LDCM0244  AC126 HCT 116 C58(1.23)  LDD0561  [8]
 LDCM0245  AC127 HCT 116 C58(0.94)  LDD0562  [8]
 LDCM0246  AC128 HCT 116 C58(0.79)  LDD0563  [8]
 LDCM0247  AC129 HCT 116 C58(0.90)  LDD0564  [8]
 LDCM0249  AC130 HCT 116 C58(0.86)  LDD0566  [8]
 LDCM0250  AC131 HCT 116 C58(0.83)  LDD0567  [8]
 LDCM0251  AC132 HCT 116 C58(1.08)  LDD0568  [8]
 LDCM0252  AC133 HCT 116 C58(0.95)  LDD0569  [8]
 LDCM0253  AC134 HCT 116 C58(1.07)  LDD0570  [8]
 LDCM0254  AC135 HCT 116 C58(0.96)  LDD0571  [8]
 LDCM0255  AC136 HCT 116 C58(1.19)  LDD0572  [8]
 LDCM0256  AC137 HCT 116 C58(1.05)  LDD0573  [8]
 LDCM0257  AC138 HCT 116 C58(1.13)  LDD0574  [8]
 LDCM0258  AC139 HCT 116 C58(1.05)  LDD0575  [8]
 LDCM0259  AC14 HCT 116 C58(1.17)  LDD0576  [8]
 LDCM0260  AC140 HCT 116 C58(1.32)  LDD0577  [8]
 LDCM0261  AC141 HCT 116 C58(1.60)  LDD0578  [8]
 LDCM0262  AC142 HCT 116 C58(0.96)  LDD0579  [8]
 LDCM0263  AC143 HEK-293T C311(0.81); C58(0.89)  LDD0861  [8]
 LDCM0264  AC144 HEK-293T C311(0.91); C58(1.03)  LDD0862  [8]
 LDCM0265  AC145 HEK-293T C311(0.82); C58(1.34)  LDD0863  [8]
 LDCM0266  AC146 HEK-293T C311(0.99); C58(0.86)  LDD0864  [8]
 LDCM0267  AC147 HEK-293T C311(0.75); C58(0.86)  LDD0865  [8]
 LDCM0268  AC148 HEK-293T C311(0.77); C58(0.96)  LDD0866  [8]
 LDCM0269  AC149 HEK-293T C311(0.88); C58(0.97)  LDD0867  [8]
 LDCM0270  AC15 HCT 116 C58(1.13)  LDD0587  [8]
 LDCM0271  AC150 HEK-293T C311(0.88); C58(0.98)  LDD0869  [8]
 LDCM0272  AC151 HEK-293T C311(0.83); C58(1.26)  LDD0870  [8]
 LDCM0273  AC152 HEK-293T C311(0.95); C58(0.92)  LDD0871  [8]
 LDCM0274  AC153 HEK-293T C311(0.83); C58(0.80)  LDD0872  [8]
 LDCM0621  AC154 HEK-293T C311(0.97); C58(0.73)  LDD2162  [8]
 LDCM0622  AC155 HEK-293T C311(0.85); C58(1.34)  LDD2163  [8]
 LDCM0623  AC156 HEK-293T C311(0.86); C58(1.18)  LDD2164  [8]
 LDCM0624  AC157 HEK-293T C311(1.06); C58(0.87)  LDD2165  [8]
 LDCM0276  AC17 HCT 116 C58(0.93)  LDD0593  [8]
 LDCM0277  AC18 HCT 116 C58(0.91)  LDD0594  [8]
 LDCM0278  AC19 HCT 116 C58(0.96)  LDD0595  [8]
 LDCM0279  AC2 HCT 116 C58(1.13); C311(1.14)  LDD0596  [8]
 LDCM0280  AC20 HCT 116 C58(1.13)  LDD0597  [8]
 LDCM0281  AC21 HCT 116 C58(0.80)  LDD0598  [8]
 LDCM0282  AC22 HCT 116 C58(0.77)  LDD0599  [8]
 LDCM0283  AC23 HCT 116 C58(0.77)  LDD0600  [8]
 LDCM0284  AC24 HCT 116 C58(0.85)  LDD0601  [8]
 LDCM0285  AC25 HCT 116 C58(0.82); C311(1.49)  LDD0602  [8]
 LDCM0286  AC26 HCT 116 C58(0.99); C311(1.03)  LDD0603  [8]
 LDCM0287  AC27 HCT 116 C58(1.02); C311(1.13)  LDD0604  [8]
 LDCM0288  AC28 HCT 116 C58(1.03); C311(1.11)  LDD0605  [8]
 LDCM0289  AC29 HCT 116 C311(0.92); C58(1.32)  LDD0606  [8]
 LDCM0290  AC3 HCT 116 C58(0.97); C311(1.33)  LDD0607  [8]
 LDCM0291  AC30 HCT 116 C58(0.95); C311(0.99)  LDD0608  [8]
 LDCM0292  AC31 HCT 116 C311(1.01); C58(1.12)  LDD0609  [8]
 LDCM0293  AC32 HCT 116 C311(0.91); C58(1.64)  LDD0610  [8]
 LDCM0294  AC33 HCT 116 C58(1.12); C311(1.24)  LDD0611  [8]
 LDCM0295  AC34 HCT 116 C311(0.97); C58(1.04)  LDD0612  [8]
 LDCM0296  AC35 HCT 116 C58(0.81); C311(1.00)  LDD0613  [8]
 LDCM0297  AC36 HCT 116 C58(0.95); C311(0.95)  LDD0614  [8]
 LDCM0298  AC37 HCT 116 C311(0.76); C58(0.78)  LDD0615  [8]
 LDCM0299  AC38 HCT 116 C311(0.93); C58(1.03)  LDD0616  [8]
 LDCM0300  AC39 HCT 116 C311(0.95); C58(1.18)  LDD0617  [8]
 LDCM0301  AC4 HCT 116 C58(1.10); C311(1.33)  LDD0618  [8]
 LDCM0302  AC40 HCT 116 C311(0.73); C58(0.85)  LDD0619  [8]
 LDCM0303  AC41 HCT 116 C311(0.61); C58(0.87)  LDD0620  [8]
 LDCM0304  AC42 HCT 116 C311(0.76); C58(1.20)  LDD0621  [8]
 LDCM0305  AC43 HCT 116 C311(0.69); C58(1.35)  LDD0622  [8]
 LDCM0306  AC44 HCT 116 C311(0.73); C58(0.89)  LDD0623  [8]
 LDCM0307  AC45 HCT 116 C311(0.62); C58(1.02)  LDD0624  [8]
 LDCM0308  AC46 HCT 116 C58(1.00)  LDD0625  [8]
 LDCM0309  AC47 HCT 116 C58(0.86)  LDD0626  [8]
 LDCM0310  AC48 HCT 116 C58(0.88)  LDD0627  [8]
 LDCM0311  AC49 HCT 116 C58(0.79)  LDD0628  [8]
 LDCM0312  AC5 HCT 116 C311(1.14); C58(1.16)  LDD0629  [8]
 LDCM0313  AC50 HCT 116 C58(0.83)  LDD0630  [8]
 LDCM0314  AC51 HCT 116 C58(0.91)  LDD0631  [8]
 LDCM0315  AC52 HCT 116 C58(0.84)  LDD0632  [8]
 LDCM0316  AC53 HCT 116 C58(0.95)  LDD0633  [8]
 LDCM0317  AC54 HCT 116 C58(1.10)  LDD0634  [8]
 LDCM0318  AC55 HCT 116 C58(1.07)  LDD0635  [8]
 LDCM0319  AC56 HCT 116 C58(1.05)  LDD0636  [8]
 LDCM0320  AC57 HCT 116 C58(0.89)  LDD0637  [8]
 LDCM0321  AC58 HCT 116 C58(1.12)  LDD0638  [8]
 LDCM0322  AC59 HCT 116 C58(0.92)  LDD0639  [8]
 LDCM0323  AC6 HCT 116 C58(1.15)  LDD0640  [8]
 LDCM0324  AC60 HCT 116 C58(0.55)  LDD0641  [8]
 LDCM0325  AC61 HCT 116 C58(0.82)  LDD0642  [8]
 LDCM0326  AC62 HCT 116 C58(0.76)  LDD0643  [8]
 LDCM0327  AC63 HCT 116 C58(0.74)  LDD0644  [8]
 LDCM0328  AC64 HCT 116 C58(0.75)  LDD0645  [8]
 LDCM0329  AC65 HCT 116 C58(0.88)  LDD0646  [8]
 LDCM0330  AC66 HCT 116 C58(0.99)  LDD0647  [8]
 LDCM0331  AC67 HCT 116 C58(0.94)  LDD0648  [8]
 LDCM0332  AC68 HCT 116 C58(0.86)  LDD0649  [8]
 LDCM0333  AC69 HCT 116 C58(0.73)  LDD0650  [8]
 LDCM0334  AC7 HCT 116 C58(1.17)  LDD0651  [8]
 LDCM0335  AC70 HCT 116 C58(0.73)  LDD0652  [8]
 LDCM0336  AC71 HCT 116 C58(0.86)  LDD0653  [8]
 LDCM0337  AC72 HCT 116 C58(0.90)  LDD0654  [8]
 LDCM0338  AC73 HCT 116 C58(0.99)  LDD0655  [8]
 LDCM0339  AC74 HCT 116 C58(1.09)  LDD0656  [8]
 LDCM0340  AC75 HCT 116 C58(1.17)  LDD0657  [8]
 LDCM0341  AC76 HCT 116 C58(0.92)  LDD0658  [8]
 LDCM0342  AC77 HCT 116 C58(0.79)  LDD0659  [8]
 LDCM0343  AC78 HCT 116 C58(0.87)  LDD0660  [8]
 LDCM0344  AC79 HCT 116 C58(0.96)  LDD0661  [8]
 LDCM0345  AC8 HCT 116 C58(1.05)  LDD0662  [8]
 LDCM0346  AC80 HCT 116 C58(1.22)  LDD0663  [8]
 LDCM0347  AC81 HCT 116 C58(0.82)  LDD0664  [8]
 LDCM0348  AC82 HCT 116 C58(1.04)  LDD0665  [8]
 LDCM0349  AC83 HCT 116 C58(1.41)  LDD0666  [8]
 LDCM0350  AC84 HCT 116 C58(1.37)  LDD0667  [8]
 LDCM0351  AC85 HCT 116 C58(1.26)  LDD0668  [8]
 LDCM0352  AC86 HCT 116 C58(1.47)  LDD0669  [8]
 LDCM0353  AC87 HCT 116 C58(1.66)  LDD0670  [8]
 LDCM0354  AC88 HCT 116 C58(1.57)  LDD0671  [8]
 LDCM0355  AC89 HCT 116 C58(1.60)  LDD0672  [8]
 LDCM0357  AC90 HCT 116 C58(1.54)  LDD0674  [8]
 LDCM0358  AC91 HCT 116 C58(1.63)  LDD0675  [8]
 LDCM0359  AC92 HCT 116 C58(1.38)  LDD0676  [8]
 LDCM0360  AC93 HCT 116 C58(1.39)  LDD0677  [8]
 LDCM0361  AC94 HCT 116 C58(0.95)  LDD0678  [8]
 LDCM0362  AC95 HCT 116 C58(1.52)  LDD0679  [8]
 LDCM0363  AC96 HCT 116 C58(1.02)  LDD0680  [8]
 LDCM0364  AC97 HCT 116 C58(2.16)  LDD0681  [8]
 LDCM0365  AC98 HCT 116 C58(1.36)  LDD0682  [8]
 LDCM0366  AC99 HCT 116 C58(1.48)  LDD0683  [8]
 LDCM0248  AKOS034007472 HCT 116 C58(1.03)  LDD0565  [8]
 LDCM0356  AKOS034007680 HCT 116 C58(1.16)  LDD0673  [8]
 LDCM0275  AKOS034007705 HCT 116 C58(1.25)  LDD0592  [8]
 LDCM0156  Aniline NCI-H1299 12.39  LDD0403  [1]
 LDCM0020  ARS-1620 HCC44 C58(0.91)  LDD2171  [8]
 LDCM0088  C45 HEK-293T 12.09  LDD0201  [4]
 LDCM0108  Chloroacetamide HeLa C193(0.00); C311(0.00)  LDD0222  [17]
 LDCM0367  CL1 HCT 116 C58(0.82); C311(0.93)  LDD0684  [8]
 LDCM0368  CL10 HCT 116 C311(0.92); C58(1.09)  LDD0685  [8]
 LDCM0369  CL100 HCT 116 C311(1.23); C58(1.33)  LDD0686  [8]
 LDCM0370  CL101 HCT 116 C58(1.15)  LDD0687  [8]
 LDCM0371  CL102 HCT 116 C58(1.02)  LDD0688  [8]
 LDCM0372  CL103 HCT 116 C58(0.96)  LDD0689  [8]
 LDCM0373  CL104 HCT 116 C58(1.16)  LDD0690  [8]
 LDCM0374  CL105 HCT 116 C58(0.84)  LDD0691  [8]
 LDCM0375  CL106 HCT 116 C58(0.66)  LDD0692  [8]
 LDCM0376  CL107 HCT 116 C58(0.93)  LDD0693  [8]
 LDCM0377  CL108 HCT 116 C58(1.06)  LDD0694  [8]
 LDCM0378  CL109 HCT 116 C58(0.97)  LDD0695  [8]
 LDCM0379  CL11 HCT 116 C58(0.84); C311(1.03)  LDD0696  [8]
 LDCM0380  CL110 HCT 116 C58(0.82)  LDD0697  [8]
 LDCM0381  CL111 HCT 116 C58(0.91)  LDD0698  [8]
 LDCM0382  CL112 HCT 116 C58(0.90); C311(0.97)  LDD0699  [8]
 LDCM0383  CL113 HCT 116 C311(0.83); C58(1.21)  LDD0700  [8]
 LDCM0384  CL114 HCT 116 C311(0.78); C58(1.23)  LDD0701  [8]
 LDCM0385  CL115 HCT 116 C311(0.92); C58(1.24)  LDD0702  [8]
 LDCM0386  CL116 HCT 116 C311(0.93); C58(1.24)  LDD0703  [8]
 LDCM0387  CL117 HCT 116 C311(0.80); C58(1.36)  LDD0704  [8]
 LDCM0388  CL118 HCT 116 C311(0.93); C58(1.08)  LDD0705  [8]
 LDCM0389  CL119 HCT 116 C311(0.91); C58(1.39)  LDD0706  [8]
 LDCM0390  CL12 HCT 116 C58(1.28); C311(1.31)  LDD0707  [8]
 LDCM0391  CL120 HCT 116 C311(0.85); C58(1.05)  LDD0708  [8]
 LDCM0392  CL121 HCT 116 C58(1.16)  LDD0709  [8]
 LDCM0393  CL122 HCT 116 C58(1.03)  LDD0710  [8]
 LDCM0394  CL123 HCT 116 C58(0.79)  LDD0711  [8]
 LDCM0395  CL124 HCT 116 C58(0.90)  LDD0712  [8]
 LDCM0396  CL125 HCT 116 C58(0.98)  LDD0713  [8]
 LDCM0397  CL126 HCT 116 C58(0.98)  LDD0714  [8]
 LDCM0398  CL127 HCT 116 C58(0.96)  LDD0715  [8]
 LDCM0399  CL128 HCT 116 C58(1.05)  LDD0716  [8]
 LDCM0400  CL13 HCT 116 C58(1.11); C311(1.18)  LDD0717  [8]
 LDCM0401  CL14 HCT 116 C311(0.95); C58(1.07)  LDD0718  [8]
 LDCM0402  CL15 HCT 116 C311(1.23); C58(1.68)  LDD0719  [8]
 LDCM0403  CL16 HCT 116 C58(1.19)  LDD0720  [8]
 LDCM0404  CL17 HCT 116 C58(1.04)  LDD0721  [8]
 LDCM0405  CL18 HCT 116 C58(0.90)  LDD0722  [8]
 LDCM0406  CL19 HCT 116 C58(0.93)  LDD0723  [8]
 LDCM0407  CL2 HCT 116 C311(0.95); C58(1.29)  LDD0724  [8]
 LDCM0408  CL20 HCT 116 C58(1.16)  LDD0725  [8]
 LDCM0409  CL21 HCT 116 C58(1.08)  LDD0726  [8]
 LDCM0410  CL22 HCT 116 C58(1.12)  LDD0727  [8]
 LDCM0411  CL23 HCT 116 C58(1.19)  LDD0728  [8]
 LDCM0412  CL24 HCT 116 C58(1.27)  LDD0729  [8]
 LDCM0413  CL25 HCT 116 C58(1.07)  LDD0730  [8]
 LDCM0414  CL26 HCT 116 C58(1.20)  LDD0731  [8]
 LDCM0415  CL27 HCT 116 C58(1.02)  LDD0732  [8]
 LDCM0416  CL28 HCT 116 C58(1.17)  LDD0733  [8]
 LDCM0417  CL29 HCT 116 C58(1.16)  LDD0734  [8]
 LDCM0418  CL3 HCT 116 C311(0.90); C58(1.04)  LDD0735  [8]
 LDCM0419  CL30 HCT 116 C58(1.14)  LDD0736  [8]
 LDCM0420  CL31 HCT 116 C311(1.22)  LDD0737  [8]
 LDCM0421  CL32 HCT 116 C311(0.95); C58(0.76)  LDD0738  [8]
 LDCM0422  CL33 HCT 116 C311(0.82); C58(0.88)  LDD0739  [8]
 LDCM0423  CL34 HCT 116 C311(0.97); C58(1.13)  LDD0740  [8]
 LDCM0424  CL35 HCT 116 C311(0.88); C58(0.97)  LDD0741  [8]
 LDCM0425  CL36 HCT 116 C311(0.85); C58(0.86)  LDD0742  [8]
 LDCM0426  CL37 HCT 116 C311(0.96); C58(0.82)  LDD0743  [8]
 LDCM0428  CL39 HCT 116 C311(1.14); C58(0.89)  LDD0745  [8]
 LDCM0429  CL4 HCT 116 C311(0.87); C58(1.25)  LDD0746  [8]
 LDCM0430  CL40 HCT 116 C311(1.01); C58(0.78)  LDD0747  [8]
 LDCM0431  CL41 HCT 116 C311(1.05); C58(1.16)  LDD0748  [8]
 LDCM0432  CL42 HCT 116 C311(0.89); C58(0.65)  LDD0749  [8]
 LDCM0433  CL43 HCT 116 C311(1.18); C58(0.85)  LDD0750  [8]
 LDCM0434  CL44 HCT 116 C311(1.05); C58(0.92)  LDD0751  [8]
 LDCM0435  CL45 HCT 116 C311(1.12); C58(1.01)  LDD0752  [8]
 LDCM0436  CL46 HCT 116 C58(1.10)  LDD0753  [8]
 LDCM0437  CL47 HCT 116 C58(1.07)  LDD0754  [8]
 LDCM0438  CL48 HCT 116 C58(1.44)  LDD0755  [8]
 LDCM0439  CL49 HCT 116 C58(0.92)  LDD0756  [8]
 LDCM0440  CL5 HCT 116 C311(1.22); C58(1.17)  LDD0757  [8]
 LDCM0441  CL50 HCT 116 C58(0.91)  LDD0758  [8]
 LDCM0442  CL51 HCT 116 C58(0.95)  LDD0759  [8]
 LDCM0443  CL52 HCT 116 C58(1.12)  LDD0760  [8]
 LDCM0444  CL53 HCT 116 C58(0.98)  LDD0761  [8]
 LDCM0445  CL54 HCT 116 C58(0.78)  LDD0762  [8]
 LDCM0446  CL55 HCT 116 C58(0.90)  LDD0763  [8]
 LDCM0447  CL56 HCT 116 C58(0.89)  LDD0764  [8]
 LDCM0448  CL57 HCT 116 C58(0.80)  LDD0765  [8]
 LDCM0449  CL58 HCT 116 C58(0.86)  LDD0766  [8]
 LDCM0450  CL59 HCT 116 C58(0.79)  LDD0767  [8]
 LDCM0451  CL6 HCT 116 C311(0.90); C58(1.00)  LDD0768  [8]
 LDCM0452  CL60 HCT 116 C58(1.00)  LDD0769  [8]
 LDCM0453  CL61 HEK-293T C58(1.16)  LDD1051  [8]
 LDCM0454  CL62 HEK-293T C58(1.38)  LDD1052  [8]
 LDCM0455  CL63 HEK-293T C58(1.07)  LDD1053  [8]
 LDCM0456  CL64 HEK-293T C58(0.99)  LDD1054  [8]
 LDCM0457  CL65 HEK-293T C58(1.21)  LDD1055  [8]
 LDCM0458  CL66 HEK-293T C58(1.19)  LDD1056  [8]
 LDCM0459  CL67 HEK-293T C58(0.99)  LDD1057  [8]
 LDCM0460  CL68 HEK-293T C58(0.83)  LDD1058  [8]
 LDCM0461  CL69 HEK-293T C58(0.87)  LDD1059  [8]
 LDCM0462  CL7 HCT 116 C311(1.59); C58(1.08)  LDD0779  [8]
 LDCM0463  CL70 HEK-293T C58(0.82)  LDD1061  [8]
 LDCM0464  CL71 HEK-293T C58(0.75)  LDD1062  [8]
 LDCM0465  CL72 HEK-293T C58(0.90)  LDD1063  [8]
 LDCM0466  CL73 HEK-293T C58(0.76)  LDD1064  [8]
 LDCM0467  CL74 HEK-293T C58(0.88)  LDD1065  [8]
 LDCM0469  CL76 HCT 116 C311(0.93); C58(1.06)  LDD0786  [8]
 LDCM0470  CL77 HCT 116 C311(0.84); C58(0.86)  LDD0787  [8]
 LDCM0471  CL78 HCT 116 C311(0.99); C58(0.87)  LDD0788  [8]
 LDCM0472  CL79 HCT 116 C311(1.06); C58(1.00)  LDD0789  [8]
 LDCM0473  CL8 HCT 116 C311(0.73); C58(0.81)  LDD0790  [8]
 LDCM0474  CL80 HCT 116 C311(1.15); C58(0.93)  LDD0791  [8]
 LDCM0475  CL81 HCT 116 C311(0.99); C58(0.92)  LDD0792  [8]
 LDCM0476  CL82 HCT 116 C311(1.08); C58(0.88)  LDD0793  [8]
 LDCM0477  CL83 HCT 116 C311(0.79); C58(1.11)  LDD0794  [8]
 LDCM0478  CL84 HCT 116 C311(0.86); C58(1.18)  LDD0795  [8]
 LDCM0479  CL85 HCT 116 C311(0.84); C58(1.11)  LDD0796  [8]
 LDCM0480  CL86 HCT 116 C311(0.96); C58(0.96)  LDD0797  [8]
 LDCM0481  CL87 HCT 116 C311(0.99); C58(0.91)  LDD0798  [8]
 LDCM0482  CL88 HCT 116 C311(0.90); C58(0.88)  LDD0799  [8]
 LDCM0483  CL89 HCT 116 C311(1.18); C58(0.94)  LDD0800  [8]
 LDCM0484  CL9 HCT 116 C311(0.98); C58(0.97)  LDD0801  [8]
 LDCM0485  CL90 HCT 116 C311(0.83); C58(0.85)  LDD0802  [8]
 LDCM0486  CL91 HCT 116 C311(1.13); C58(1.33)  LDD0803  [8]
 LDCM0487  CL92 HCT 116 C311(1.03); C58(1.07)  LDD0804  [8]
 LDCM0488  CL93 HCT 116 C311(0.95); C58(1.10)  LDD0805  [8]
 LDCM0489  CL94 HCT 116 C311(1.04); C58(0.92)  LDD0806  [8]
 LDCM0490  CL95 HCT 116 C311(1.00); C58(0.85)  LDD0807  [8]
 LDCM0491  CL96 HCT 116 C311(1.26); C58(0.94)  LDD0808  [8]
 LDCM0492  CL97 HCT 116 C311(1.13); C58(0.92)  LDD0809  [8]
 LDCM0493  CL98 HCT 116 C311(1.28); C58(0.96)  LDD0810  [8]
 LDCM0494  CL99 HCT 116 C311(1.26); C58(1.07)  LDD0811  [8]
 LDCM0495  E2913 HEK-293T C58(0.84)  LDD1698  [24]
 LDCM0213  Electrophilic fragment 2 MDA-MB-231 C311(1.21)  LDD1702  [5]
 LDCM0625  F8 Ramos C58(1.46)  LDD2187  [25]
 LDCM0572  Fragment10 Ramos C58(1.83)  LDD2189  [25]
 LDCM0573  Fragment11 Ramos C58(0.66)  LDD2190  [25]
 LDCM0574  Fragment12 Ramos C58(1.10)  LDD2191  [25]
 LDCM0575  Fragment13 Ramos C58(1.09)  LDD2192  [25]
 LDCM0576  Fragment14 Ramos C58(0.70)  LDD2193  [25]
 LDCM0579  Fragment20 Ramos C58(0.93)  LDD2194  [25]
 LDCM0580  Fragment21 Ramos C58(1.07)  LDD2195  [25]
 LDCM0582  Fragment23 Ramos C58(1.17)  LDD2196  [25]
 LDCM0578  Fragment27 Ramos C58(1.03)  LDD2197  [25]
 LDCM0586  Fragment28 Ramos C58(0.88)  LDD2198  [25]
 LDCM0588  Fragment30 Ramos C58(1.52)  LDD2199  [25]
 LDCM0589  Fragment31 Ramos C58(0.90)  LDD2200  [25]
 LDCM0590  Fragment32 Ramos C58(1.50)  LDD2201  [25]
 LDCM0468  Fragment33 HEK-293T C58(0.76)  LDD1066  [8]
 LDCM0596  Fragment38 Ramos C58(1.09)  LDD2203  [25]
 LDCM0566  Fragment4 Ramos C58(0.81)  LDD2184  [25]
 LDCM0427  Fragment51 HCT 116 C311(0.85); C58(0.88)  LDD0744  [8]
 LDCM0610  Fragment52 Ramos C58(1.16)  LDD2204  [25]
 LDCM0614  Fragment56 Ramos C58(1.53)  LDD2205  [25]
 LDCM0569  Fragment7 Ramos C58(0.96)  LDD2186  [25]
 LDCM0571  Fragment9 Ramos C58(1.25)  LDD2188  [25]
 LDCM0107  IAA HeLa C311(0.00); C193(0.00)  LDD0221  [17]
 LDCM0022  KB02 HCT 116 C311(1.49)  LDD0080  [8]
 LDCM0023  KB03 HCT 116 C311(1.64)  LDD0081  [8]
 LDCM0024  KB05 HCT 116 C311(1.57)  LDD0082  [8]
 LDCM0509  N-(4-bromo-3,5-dimethylphenyl)-2-nitroacetamide MDA-MB-231 C58(1.13)  LDD2102  [5]
 LDCM0109  NEM HeLa N.A.  LDD0223  [17]
 LDCM0499  Nucleophilic fragment 12b MDA-MB-231 C58(0.84)  LDD2092  [5]
 LDCM0500  Nucleophilic fragment 13a MDA-MB-231 C193(0.95)  LDD2093  [5]
 LDCM0504  Nucleophilic fragment 15a MDA-MB-231 C193(0.65)  LDD2097  [5]
 LDCM0505  Nucleophilic fragment 15b MDA-MB-231 C193(0.81)  LDD2098  [5]
 LDCM0506  Nucleophilic fragment 16a MDA-MB-231 C193(1.79); C311(1.03)  LDD2099  [5]
 LDCM0507  Nucleophilic fragment 16b MDA-MB-231 C58(1.04); C193(0.40)  LDD2100  [5]
 LDCM0511  Nucleophilic fragment 18b MDA-MB-231 C58(0.97); C193(0.35)  LDD2104  [5]
 LDCM0513  Nucleophilic fragment 19b MDA-MB-231 C58(0.92); C193(0.33)  LDD2106  [5]
 LDCM0514  Nucleophilic fragment 20a MDA-MB-231 C193(1.41)  LDD2107  [5]
 LDCM0515  Nucleophilic fragment 20b MDA-MB-231 C58(0.66)  LDD2108  [5]
 LDCM0516  Nucleophilic fragment 21a MDA-MB-231 C58(0.75)  LDD2109  [5]
 LDCM0518  Nucleophilic fragment 22a MDA-MB-231 C58(0.93); C193(0.90)  LDD2111  [5]
 LDCM0521  Nucleophilic fragment 23b MDA-MB-231 C58(0.63); C193(0.46)  LDD2114  [5]
 LDCM0526  Nucleophilic fragment 26a MDA-MB-231 C193(0.82)  LDD2119  [5]
 LDCM0530  Nucleophilic fragment 28a MDA-MB-231 C58(1.09)  LDD2123  [5]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C311(0.96)  LDD2125  [5]
 LDCM0534  Nucleophilic fragment 30a MDA-MB-231 C58(1.27); C193(0.81); C311(0.97)  LDD2127  [5]
 LDCM0536  Nucleophilic fragment 31 MDA-MB-231 C58(0.66)  LDD2129  [5]
 LDCM0541  Nucleophilic fragment 36 MDA-MB-231 C193(0.82)  LDD2134  [5]
 LDCM0542  Nucleophilic fragment 37 MDA-MB-231 C58(0.57); C193(0.92); C311(0.88)  LDD2135  [5]
 LDCM0543  Nucleophilic fragment 38 MDA-MB-231 C58(1.62)  LDD2136  [5]
 LDCM0546  Nucleophilic fragment 40 MDA-MB-231 C193(0.95)  LDD2140  [5]
 LDCM0547  Nucleophilic fragment 41 MDA-MB-231 C193(0.42)  LDD2141  [5]
 LDCM0550  Nucleophilic fragment 5a MDA-MB-231 C193(1.16); C311(1.71)  LDD2144  [5]
 LDCM0551  Nucleophilic fragment 5b MDA-MB-231 C58(4.18)  LDD2145  [5]
 LDCM0552  Nucleophilic fragment 6a MDA-MB-231 C58(0.71); C193(0.82); C311(0.97)  LDD2146  [5]
 LDCM0556  Nucleophilic fragment 8a MDA-MB-231 C58(0.42)  LDD2150  [5]
 LDCM0003  Sulforaphane MDA-MB-231 1.57  LDD0160  [6]
 LDCM0021  THZ1 HCT 116 C58(0.91)  LDD2173  [8]

References

1 Quantitative and Site-Specific Chemoproteomic Profiling of Targets of Acrolein. Chem Res Toxicol. 2019 Mar 18;32(3):467-473. doi: 10.1021/acs.chemrestox.8b00343. Epub 2019 Jan 15.
2 Cyclopropenone, Cyclopropeniminium Ion, and Cyclopropenethione as Novel Electrophilic Warheads for Potential Target Discovery of Triple-Negative Breast Cancer. J Med Chem. 2023 Feb 23;66(4):2851-2864. doi: 10.1021/acs.jmedchem.2c01889. Epub 2023 Feb 10.
3 An Azo Coupling-Based Chemoproteomic Approach to Systematically Profile the Tyrosine Reactivity in the Human Proteome. Anal Chem. 2021 Jul 27;93(29):10334-10342. doi: 10.1021/acs.analchem.1c01935. Epub 2021 Jul 12.
4 Discovery of Potent and Selective Inhibitors against Protein-Derived Electrophilic Cofactors. J Am Chem Soc. 2022 Mar 30;144(12):5377-5388. doi: 10.1021/jacs.1c12748. Epub 2022 Mar 2.
5 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
6 Competition-based, quantitative chemical proteomics in breast cancer cells identifies new target profiles for sulforaphane. Chem Commun (Camb). 2017 May 4;53(37):5182-5185. doi: 10.1039/c6cc08797c.
Mass spectrometry data entry: PXD006279
7 Chemoproteomic capture of RNA binding activity in living cells. Nat Commun. 2023 Oct 7;14(1):6282. doi: 10.1038/s41467-023-41844-z.
Mass spectrometry data entry: PXD044625
8 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
9 Global profiling of functional histidines in live cells using small-molecule photosensitizer and chemical probe relay labelling. Nat Chem. 2024 Jun 4. doi: 10.1038/s41557-024-01545-6. Online ahead of print.
Mass spectrometry data entry: PXD042377
10 Targeted Proteomic Approaches for Proteome-Wide Characterizations of the AMP-Binding Capacities of Kinases. J Proteome Res. 2022 Aug 5;21(8):2063-2070. doi: 10.1021/acs.jproteome.2c00225. Epub 2022 Jul 12.
11 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
12 Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling. Anal Chem. 2021 Feb 2;93(4):2610-2618. doi: 10.1021/acs.analchem.0c04726. Epub 2021 Jan 20.
Mass spectrometry data entry: PXD022279
13 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
14 Solid Phase Synthesis of Fluorosulfate Containing Macrocycles for Chemoproteomic Workflows. bioRxiv [Preprint]. 2023 Feb 18:2023.02.17.529022. doi: 10.1101/2023.02.17.529022.
Mass spectrometry data entry: PXD039931
15 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
16 DFT-Guided Discovery of Ethynyl-Triazolyl-Phosphinates as Modular Electrophiles for Chemoselective Cysteine Bioconjugation and Profiling. Angew Chem Int Ed Engl. 2022 Oct 10;61(41):e202205348. doi: 10.1002/anie.202205348. Epub 2022 Aug 22.
Mass spectrometry data entry: PXD033004
17 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
18 Oxidant-Induced Bioconjugation for Protein Labeling in Live Cells. ACS Chem Biol. 2023 Jan 20;18(1):112-122. doi: 10.1021/acschembio.2c00740. Epub 2022 Dec 21.
19 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
20 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
21 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587
22 Ligand and Target Discovery by Fragment-Based Screening in Human Cells. Cell. 2017 Jan 26;168(3):527-541.e29. doi: 10.1016/j.cell.2016.12.029. Epub 2017 Jan 19.
23 Design and synthesis of minimalist terminal alkyne-containing diazirine photo-crosslinkers and their incorporation into kinase inhibitors for cell- and tissue-based proteome profiling. Angew Chem Int Ed Engl. 2013 Aug 12;52(33):8551-6. doi: 10.1002/anie.201300683. Epub 2013 Jun 10.
24 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
25 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578