Details of the Target

General Information of Target

Target ID LDTP05419
Target Name 1,4-alpha-glucan-branching enzyme (GBE1)
Gene Name GBE1
Gene ID 2632
Synonyms
1,4-alpha-glucan-branching enzyme; EC 2.4.1.18; Brancher enzyme; Glycogen-branching enzyme
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MAAPMTPAARPEDYEAALNAALADVPELARLLEIDPYLKPYAVDFQRRYKQFSQILKNIG
ENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYG
KWELYIPPKQNKSVLVPHGSKLKVVITSKSGEILYRISPWAKYVVREGDNVNYDWIHWDP
EHSYEFKHSRPKKPRSLRIYESHVGISSHEGKVASYKHFTCNVLPRIKGLGYNCIQLMAI
MEHAYYASFGYQITSFFAASSRYGTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGL
NMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEILRFLLSNIRWWLEEYRFDGFRFDGVT
SMLYHHHGVGQGFSGDYSEYFGLQVDEDALTYLMLANHLVHTLCPDSITIAEDVSGMPAL
CSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNRRYLEKCIAYAESH
DQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMG
NEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAP
QAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGH
QRLDHSTDFFSEAFEHNGRPYSLLVYIPSRVALILQNVDLPN
Target Bioclass
Enzyme
Family
Glycosyl hydrolase 13 family, GlgB subfamily
Function Required for normal glycogen accumulation. The alpha 1-6 branches of glycogen play an important role in increasing the solubility of the molecule (Probable).
Uniprot ID
Q04446
Ensemble ID
ENST00000429644.7
HGNC ID
HGNC:4180

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 27 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info  		15.00  LDD0402  [1]
N1
 Probe Info  		4.12  LDD0242  [2]
TH211
 Probe Info  		Y200(12.56); Y41(12.29); Y562(11.30); Y73(10.42)  LDD0260  [3]
STPyne
 Probe Info  		K132(0.75); K149(5.56); K162(0.36); K39(10.00)  LDD0277  [4]
OPA-S-S-alkyne
 Probe Info  		K554(0.94)  LDD3494  [5]
BTD
 Probe Info  		C221(0.66)  LDD2091  [6]
AHL-Pu-1
 Probe Info  		C88(2.09); C221(2.16)  LDD0168  [7]
HHS-482
 Probe Info  		Y37(0.70)  LDD0285  [8]
HHS-475
 Probe Info  		Y37(0.96); Y560(0.99)  LDD0264  [9]
Acrolein
 Probe Info  		H660(0.00); H79(0.00)  LDD0221  [10]
DBIA
 Probe Info  		C81(0.85); C88(0.85)  LDD0078  [11]
ATP probe
 Probe Info  		K68(0.00); K554(0.00)  LDD0199  [12]
4-Iodoacetamidophenylacetylene
 Probe Info  		C473(0.00); C221(0.00); C309(0.00); C81(0.00)  LDD0038  [13]
IA-alkyne
 Probe Info  		C473(0.00); C221(0.00); C309(0.00); C81(0.00)  LDD0036  [13]
IPIAA_L
 Probe Info  		N.A.  LDD0031  [14]
Lodoacetamide azide
 Probe Info  		C473(0.00); C221(0.00); C309(0.00)  LDD0037  [13]
NAIA_4
 Probe Info  		N.A.  LDD2226  [15]
TFBX
 Probe Info  		N.A.  LDD0027  [16]
Compound 10
 Probe Info  		N.A.  LDD2216  [17]
Compound 11
 Probe Info  		N.A.  LDD2213  [17]
IPM
 Probe Info  		N.A.  LDD0147  [16]
VSF
 Probe Info  		N.A.  LDD0007  [18]
1c-yne
 Probe Info  		N.A.  LDD0228  [19]
Methacrolein
 Probe Info  		N.A.  LDD0218  [10]
AOyne
 Probe Info  		10.40  LDD0443  [20]
NAIA_5
 Probe Info  		N.A.  LDD2223  [15]
HHS-465
 Probe Info  		Y37(0.00); K39(0.00)  LDD2240  [21]
PAL-AfBPP Probe
Click To Hide/Show 1 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
STS-1
 Probe Info  		1.14  LDD0137  [22]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0524  2-Cyano-N-(2-morpholin-4-yl-ethyl)-acetamide MDA-MB-231 C221(1.06)  LDD2117  [6]
 LDCM0539  3-(4-Isopropylpiperazin-1-yl)-3-oxopropanenitrile MDA-MB-231 C221(0.62)  LDD2132  [6]
 LDCM0025  4SU-RNA HEK-293T C88(2.09); C221(2.16)  LDD0168  [7]
 LDCM0026  4SU-RNA+native RNA HEK-293T C88(3.18); C221(2.58)  LDD0169  [7]
 LDCM0214  AC1 HCT 116 C81(1.05); C88(0.94)  LDD0531  [11]
 LDCM0215  AC10 HCT 116 C81(0.95); C88(0.99)  LDD0532  [11]
 LDCM0216  AC100 HCT 116 C81(1.01); C88(1.01)  LDD0533  [11]
 LDCM0217  AC101 HCT 116 C81(0.75); C88(0.75)  LDD0534  [11]
 LDCM0218  AC102 HCT 116 C81(0.71); C88(0.71)  LDD0535  [11]
 LDCM0219  AC103 HCT 116 C81(0.29); C88(0.29)  LDD0536  [11]
 LDCM0220  AC104 HCT 116 C81(0.63); C88(0.63)  LDD0537  [11]
 LDCM0221  AC105 HCT 116 C81(0.48); C88(0.48)  LDD0538  [11]
 LDCM0222  AC106 HCT 116 C81(0.50); C88(0.50)  LDD0539  [11]
 LDCM0223  AC107 HCT 116 C81(0.35); C88(0.31)  LDD0540  [11]
 LDCM0224  AC108 HCT 116 C81(0.49); C88(0.51)  LDD0541  [11]
 LDCM0225  AC109 HCT 116 C81(0.81); C88(0.83)  LDD0542  [11]
 LDCM0226  AC11 HCT 116 C81(1.04); C88(1.02)  LDD0543  [11]
 LDCM0227  AC110 HCT 116 C81(0.49); C88(0.51)  LDD0544  [11]
 LDCM0228  AC111 HCT 116 C81(0.51); C88(0.51)  LDD0545  [11]
 LDCM0229  AC112 HCT 116 C81(0.46); C88(0.44)  LDD0546  [11]
 LDCM0230  AC113 HCT 116 C81(1.23); C88(1.23)  LDD0547  [11]
 LDCM0231  AC114 HCT 116 C81(0.76); C88(0.76)  LDD0548  [11]
 LDCM0232  AC115 HCT 116 C81(0.77); C88(0.77)  LDD0549  [11]
 LDCM0233  AC116 HCT 116 C81(0.76); C88(0.76)  LDD0550  [11]
 LDCM0234  AC117 HCT 116 C81(0.95); C88(0.95)  LDD0551  [11]
 LDCM0235  AC118 HCT 116 C81(0.91); C88(0.91)  LDD0552  [11]
 LDCM0236  AC119 HCT 116 C81(0.93); C88(0.93)  LDD0553  [11]
 LDCM0237  AC12 HCT 116 C81(0.98); C88(0.98)  LDD0554  [11]
 LDCM0238  AC120 HCT 116 C81(0.69); C88(0.69)  LDD0555  [11]
 LDCM0239  AC121 HCT 116 C81(1.06); C88(1.06)  LDD0556  [11]
 LDCM0240  AC122 HCT 116 C81(0.81); C88(0.81)  LDD0557  [11]
 LDCM0241  AC123 HCT 116 C81(1.09); C88(1.09)  LDD0558  [11]
 LDCM0242  AC124 HCT 116 C81(1.06); C88(1.06)  LDD0559  [11]
 LDCM0243  AC125 HCT 116 C81(0.81); C88(0.81)  LDD0560  [11]
 LDCM0244  AC126 HCT 116 C81(0.64); C88(0.64)  LDD0561  [11]
 LDCM0245  AC127 HCT 116 C81(0.79); C88(0.79)  LDD0562  [11]
 LDCM0246  AC128 HCT 116 C81(0.71); C88(0.71)  LDD0563  [11]
 LDCM0247  AC129 HCT 116 C81(1.45); C88(1.45)  LDD0564  [11]
 LDCM0249  AC130 HCT 116 C81(1.05); C88(1.05)  LDD0566  [11]
 LDCM0250  AC131 HCT 116 C81(1.25); C88(1.25)  LDD0567  [11]
 LDCM0251  AC132 HCT 116 C81(1.16); C88(1.16)  LDD0568  [11]
 LDCM0252  AC133 HCT 116 C81(1.14); C88(1.14)  LDD0569  [11]
 LDCM0253  AC134 HCT 116 C81(0.62); C88(0.62)  LDD0570  [11]
 LDCM0254  AC135 HCT 116 C81(0.64); C88(0.64)  LDD0571  [11]
 LDCM0255  AC136 HCT 116 C81(0.85); C88(0.85)  LDD0572  [11]
 LDCM0256  AC137 HCT 116 C81(1.06); C88(1.06)  LDD0573  [11]
 LDCM0257  AC138 HCT 116 C81(0.74); C88(0.74)  LDD0574  [11]
 LDCM0258  AC139 HCT 116 C81(0.83); C88(0.83)  LDD0575  [11]
 LDCM0259  AC14 HCT 116 C81(1.18); C88(0.86)  LDD0576  [11]
 LDCM0260  AC140 HCT 116 C81(0.54); C88(0.54)  LDD0577  [11]
 LDCM0261  AC141 HCT 116 C81(0.73); C88(0.73)  LDD0578  [11]
 LDCM0262  AC142 HCT 116 C81(1.11); C88(1.11)  LDD0579  [11]
 LDCM0263  AC143 HCT 116 C81(1.36); C88(1.36)  LDD0580  [11]
 LDCM0264  AC144 HCT 116 C81(0.65); C88(0.65)  LDD0581  [11]
 LDCM0265  AC145 HCT 116 C81(0.89); C88(0.89)  LDD0582  [11]
 LDCM0266  AC146 HCT 116 C81(0.94); C88(0.94)  LDD0583  [11]
 LDCM0267  AC147 HCT 116 C81(0.40); C88(0.40)  LDD0584  [11]
 LDCM0268  AC148 HCT 116 C81(0.07); C88(0.07)  LDD0585  [11]
 LDCM0269  AC149 HCT 116 C81(0.35); C88(0.35)  LDD0586  [11]
 LDCM0270  AC15 HCT 116 C88(0.86); C81(1.15)  LDD0587  [11]
 LDCM0271  AC150 HCT 116 C81(4.84); C88(4.84)  LDD0588  [11]
 LDCM0272  AC151 HCT 116 C81(0.97); C88(0.97)  LDD0589  [11]
 LDCM0273  AC152 HCT 116 C81(0.29); C88(0.29)  LDD0590  [11]
 LDCM0274  AC153 HCT 116 C81(0.07); C88(0.07)  LDD0591  [11]
 LDCM0621  AC154 HCT 116 C81(0.66); C88(0.66)  LDD2158  [11]
 LDCM0622  AC155 HCT 116 C81(0.73); C88(0.73)  LDD2159  [11]
 LDCM0623  AC156 HCT 116 C81(1.25); C88(1.25)  LDD2160  [11]
 LDCM0624  AC157 HCT 116 C81(1.18); C88(1.18)  LDD2161  [11]
 LDCM0276  AC17 HCT 116 C88(0.88); C81(0.96)  LDD0593  [11]
 LDCM0277  AC18 HCT 116 C88(0.61); C81(1.00)  LDD0594  [11]
 LDCM0278  AC19 HCT 116 C81(0.98); C88(1.03)  LDD0595  [11]
 LDCM0279  AC2 HCT 116 C88(1.08); C81(1.84)  LDD0596  [11]
 LDCM0280  AC20 HCT 116 C88(0.95); C81(1.17)  LDD0597  [11]
 LDCM0281  AC21 HCT 116 C88(0.96); C81(1.02)  LDD0598  [11]
 LDCM0282  AC22 HCT 116 C88(0.97); C81(1.08)  LDD0599  [11]
 LDCM0283  AC23 HCT 116 C88(0.96); C81(0.99)  LDD0600  [11]
 LDCM0284  AC24 HCT 116 C81(1.13); C88(1.24)  LDD0601  [11]
 LDCM0285  AC25 HCT 116 C81(0.98); C88(1.11)  LDD0602  [11]
 LDCM0286  AC26 HCT 116 C88(0.68); C81(0.74)  LDD0603  [11]
 LDCM0287  AC27 HCT 116 C88(0.73); C81(0.78)  LDD0604  [11]
 LDCM0288  AC28 HCT 116 C88(0.62); C81(0.71)  LDD0605  [11]
 LDCM0289  AC29 HCT 116 C88(0.54); C81(0.79)  LDD0606  [11]
 LDCM0290  AC3 HCT 116 C88(0.96); C81(1.12)  LDD0607  [11]
 LDCM0291  AC30 HCT 116 C88(0.53); C81(0.76)  LDD0608  [11]
 LDCM0292  AC31 HCT 116 C88(0.64); C81(0.79)  LDD0609  [11]
 LDCM0293  AC32 HCT 116 C88(0.33); C81(0.56)  LDD0610  [11]
 LDCM0294  AC33 HCT 116 C81(0.73); C88(0.74)  LDD0611  [11]
 LDCM0295  AC34 HCT 116 C88(0.51); C81(0.58)  LDD0612  [11]
 LDCM0296  AC35 HCT 116 C81(1.89); C88(2.48)  LDD0613  [11]
 LDCM0297  AC36 HCT 116 C88(1.72); C81(1.76)  LDD0614  [11]
 LDCM0298  AC37 HCT 116 C81(2.00); C88(2.52)  LDD0615  [11]
 LDCM0299  AC38 HCT 116 C88(1.31); C81(1.41)  LDD0616  [11]
 LDCM0300  AC39 HCT 116 C88(1.09); C81(1.12)  LDD0617  [11]
 LDCM0301  AC4 HCT 116 C88(0.77); C81(0.89)  LDD0618  [11]
 LDCM0302  AC40 HCT 116 C81(0.82); C88(0.92)  LDD0619  [11]
 LDCM0303  AC41 HCT 116 C81(1.57); C88(1.69)  LDD0620  [11]
 LDCM0304  AC42 HCT 116 C88(0.97); C81(1.04)  LDD0621  [11]
 LDCM0305  AC43 HCT 116 C88(0.73); C81(0.88)  LDD0622  [11]
 LDCM0306  AC44 HCT 116 C81(1.79); C88(2.69)  LDD0623  [11]
 LDCM0307  AC45 HCT 116 C81(1.66); C88(2.62)  LDD0624  [11]
 LDCM0308  AC46 HCT 116 C81(1.26); C88(1.26)  LDD0625  [11]
 LDCM0309  AC47 HCT 116 C81(1.05); C88(1.05)  LDD0626  [11]
 LDCM0310  AC48 HCT 116 C81(1.23); C88(1.23)  LDD0627  [11]
 LDCM0311  AC49 HCT 116 C81(0.12); C88(0.12)  LDD0628  [11]
 LDCM0312  AC5 HCT 116 C88(0.74); C81(0.91)  LDD0629  [11]
 LDCM0313  AC50 HCT 116 C81(0.15); C88(0.15)  LDD0630  [11]
 LDCM0314  AC51 HCT 116 C81(12.81); C88(12.81)  LDD0631  [11]
 LDCM0315  AC52 HCT 116 C81(2.83); C88(2.83)  LDD0632  [11]
 LDCM0316  AC53 HCT 116 C81(0.39); C88(0.39)  LDD0633  [11]
 LDCM0317  AC54 HCT 116 C81(0.29); C88(0.29)  LDD0634  [11]
 LDCM0318  AC55 HCT 116 C81(0.12); C88(0.12)  LDD0635  [11]
 LDCM0319  AC56 HCT 116 C81(0.11); C88(0.11)  LDD0636  [11]
 LDCM0320  AC57 HCT 116 C88(0.50); C81(0.55)  LDD0637  [11]
 LDCM0321  AC58 HCT 116 C88(0.43); C81(0.56)  LDD0638  [11]
 LDCM0322  AC59 HCT 116 C88(0.22); C81(0.47)  LDD0639  [11]
 LDCM0323  AC6 HCT 116 C88(0.93); C81(0.98)  LDD0640  [11]
 LDCM0324  AC60 HCT 116 C88(0.49); C81(0.69)  LDD0641  [11]
 LDCM0325  AC61 HCT 116 C88(0.59); C81(0.66)  LDD0642  [11]
 LDCM0326  AC62 HCT 116 C88(0.15); C81(0.39)  LDD0643  [11]
 LDCM0327  AC63 HCT 116 C88(0.59); C81(0.68)  LDD0644  [11]
 LDCM0328  AC64 HCT 116 C88(0.18); C81(0.39)  LDD0645  [11]
 LDCM0329  AC65 HCT 116 C88(0.35); C81(0.55)  LDD0646  [11]
 LDCM0330  AC66 HCT 116 C88(0.43); C81(0.62)  LDD0647  [11]
 LDCM0331  AC67 HCT 116 C88(0.07); C81(0.34)  LDD0648  [11]
 LDCM0332  AC68 HCT 116 C88(0.75); C81(0.89)  LDD0649  [11]
 LDCM0333  AC69 HCT 116 C88(0.37); C81(0.56)  LDD0650  [11]
 LDCM0334  AC7 HCT 116 C81(1.08); C88(1.21)  LDD0651  [11]
 LDCM0335  AC70 HCT 116 C88(0.15); C81(0.42)  LDD0652  [11]
 LDCM0336  AC71 HCT 116 C81(1.06); C88(1.19)  LDD0653  [11]
 LDCM0337  AC72 HCT 116 C88(0.49); C81(0.66)  LDD0654  [11]
 LDCM0338  AC73 HCT 116 C88(0.10); C81(0.39)  LDD0655  [11]
 LDCM0339  AC74 HCT 116 C88(0.10); C81(0.36)  LDD0656  [11]
 LDCM0340  AC75 HCT 116 C88(0.09); C81(0.43)  LDD0657  [11]
 LDCM0341  AC76 HCT 116 C88(0.28); C81(0.50)  LDD0658  [11]
 LDCM0342  AC77 HCT 116 C88(0.25); C81(0.55)  LDD0659  [11]
 LDCM0343  AC78 HCT 116 C81(0.96); C88(1.02)  LDD0660  [11]
 LDCM0344  AC79 HCT 116 C88(0.71); C81(0.82)  LDD0661  [11]
 LDCM0345  AC8 HCT 116 C88(1.03); C81(1.06)  LDD0662  [11]
 LDCM0346  AC80 HCT 116 C88(0.37); C81(0.54)  LDD0663  [11]
 LDCM0347  AC81 HCT 116 C88(0.70); C81(0.80)  LDD0664  [11]
 LDCM0348  AC82 HCT 116 C88(0.12); C81(0.47)  LDD0665  [11]
 LDCM0349  AC83 HCT 116 C88(0.49); C81(0.70)  LDD0666  [11]
 LDCM0350  AC84 HCT 116 C88(0.39); C81(0.61)  LDD0667  [11]
 LDCM0351  AC85 HCT 116 C88(0.84); C81(0.87)  LDD0668  [11]
 LDCM0352  AC86 HCT 116 C88(0.86); C81(1.01)  LDD0669  [11]
 LDCM0353  AC87 HCT 116 C88(0.64); C81(0.72)  LDD0670  [11]
 LDCM0354  AC88 HCT 116 C88(0.68); C81(0.77)  LDD0671  [11]
 LDCM0355  AC89 HCT 116 C88(0.51); C81(0.66)  LDD0672  [11]
 LDCM0357  AC90 HCT 116 C81(1.00); C88(1.32)  LDD0674  [11]
 LDCM0358  AC91 HCT 116 C88(0.60); C81(0.64)  LDD0675  [11]
 LDCM0359  AC92 HCT 116 C88(0.56); C81(0.63)  LDD0676  [11]
 LDCM0360  AC93 HCT 116 C81(0.77); C88(0.89)  LDD0677  [11]
 LDCM0361  AC94 HCT 116 C81(1.03); C88(1.22)  LDD0678  [11]
 LDCM0362  AC95 HCT 116 C81(0.95); C88(0.99)  LDD0679  [11]
 LDCM0363  AC96 HCT 116 C81(0.82); C88(0.92)  LDD0680  [11]
 LDCM0364  AC97 HCT 116 C88(0.37); C81(0.60)  LDD0681  [11]
 LDCM0365  AC98 HCT 116 C81(0.08); C88(0.08)  LDD0682  [11]
 LDCM0366  AC99 HCT 116 C81(0.60); C88(0.60)  LDD0683  [11]
 LDCM0248  AKOS034007472 HCT 116 C81(1.07); C88(1.15)  LDD0565  [11]
 LDCM0356  AKOS034007680 HCT 116 C81(1.06); C88(1.16)  LDD0673  [11]
 LDCM0275  AKOS034007705 HCT 116 C88(0.20); C81(0.70)  LDD0592  [11]
 LDCM0020  ARS-1620 HCC44 C81(0.85); C88(0.85)  LDD0078  [11]
 LDCM0498  BS-3668 MDA-MB-231 C221(0.66)  LDD2091  [6]
 LDCM0108  Chloroacetamide HeLa C221(0.00); H79(0.00)  LDD0222  [10]
 LDCM0367  CL1 HCT 116 C81(1.08); C88(1.12)  LDD0684  [11]
 LDCM0368  CL10 HCT 116 C88(0.37); C81(0.68)  LDD0685  [11]
 LDCM0369  CL100 HCT 116 C88(0.80); C81(0.91)  LDD0686  [11]
 LDCM0370  CL101 HCT 116 C88(0.97); C81(1.21)  LDD0687  [11]
 LDCM0371  CL102 HCT 116 C88(1.14); C81(1.27)  LDD0688  [11]
 LDCM0372  CL103 HCT 116 C88(1.16); C81(1.33)  LDD0689  [11]
 LDCM0373  CL104 HCT 116 C88(1.13); C81(1.46)  LDD0690  [11]
 LDCM0374  CL105 HCT 116 C88(0.84); C81(0.91)  LDD0691  [11]
 LDCM0375  CL106 HCT 116 C88(0.26); C81(0.55)  LDD0692  [11]
 LDCM0376  CL107 HCT 116 C88(0.39); C81(0.72)  LDD0693  [11]
 LDCM0377  CL108 HCT 116 C88(0.22); C81(0.57)  LDD0694  [11]
 LDCM0378  CL109 HCT 116 C88(0.83); C81(0.97)  LDD0695  [11]
 LDCM0379  CL11 HCT 116 C88(0.20); C81(0.40)  LDD0696  [11]
 LDCM0380  CL110 HCT 116 C88(0.57); C81(0.86)  LDD0697  [11]
 LDCM0381  CL111 HCT 116 C88(0.96); C81(1.16)  LDD0698  [11]
 LDCM0382  CL112 HCT 116 C81(0.90); C88(0.92)  LDD0699  [11]
 LDCM0383  CL113 HCT 116 C88(0.41); C81(0.56)  LDD0700  [11]
 LDCM0384  CL114 HCT 116 C88(0.58); C81(0.83)  LDD0701  [11]
 LDCM0385  CL115 HCT 116 C88(0.70); C81(0.85)  LDD0702  [11]
 LDCM0386  CL116 HCT 116 C88(0.91); C81(0.93)  LDD0703  [11]
 LDCM0387  CL117 HCT 116 C88(0.38); C81(0.51)  LDD0704  [11]
 LDCM0388  CL118 HCT 116 C81(1.06); C88(1.09)  LDD0705  [11]
 LDCM0389  CL119 HCT 116 C88(0.86); C81(0.95)  LDD0706  [11]
 LDCM0390  CL12 HCT 116 C88(0.15); C81(0.44)  LDD0707  [11]
 LDCM0391  CL120 HCT 116 C88(1.20); C81(1.30)  LDD0708  [11]
 LDCM0392  CL121 HCT 116 C81(1.20); C88(1.20)  LDD0709  [11]
 LDCM0393  CL122 HCT 116 C81(0.60); C88(0.60)  LDD0710  [11]
 LDCM0394  CL123 HCT 116 C81(0.35); C88(0.35)  LDD0711  [11]
 LDCM0395  CL124 HCT 116 C81(0.18); C88(0.18)  LDD0712  [11]
 LDCM0396  CL125 HCT 116 C81(1.03); C88(1.09)  LDD0713  [11]
 LDCM0397  CL126 HCT 116 C88(0.97); C81(1.09)  LDD0714  [11]
 LDCM0398  CL127 HCT 116 C88(1.02); C81(1.06)  LDD0715  [11]
 LDCM0399  CL128 HCT 116 C88(0.33); C81(0.48)  LDD0716  [11]
 LDCM0400  CL13 HCT 116 C88(0.45); C81(0.69)  LDD0717  [11]
 LDCM0401  CL14 HCT 116 C81(1.08); C88(1.11)  LDD0718  [11]
 LDCM0402  CL15 HCT 116 C88(0.48); C81(0.64)  LDD0719  [11]
 LDCM0403  CL16 HCT 116 C88(0.89); C81(1.01)  LDD0720  [11]
 LDCM0404  CL17 HCT 116 C88(0.87); C81(0.89)  LDD0721  [11]
 LDCM0405  CL18 HCT 116 C88(0.89); C81(0.89)  LDD0722  [11]
 LDCM0406  CL19 HCT 116 C88(0.65); C81(0.82)  LDD0723  [11]
 LDCM0407  CL2 HCT 116 C81(1.12); C88(1.13)  LDD0724  [11]
 LDCM0408  CL20 HCT 116 C88(0.43); C81(0.70)  LDD0725  [11]
 LDCM0409  CL21 HCT 116 C88(0.21); C81(0.50)  LDD0726  [11]
 LDCM0410  CL22 HCT 116 C88(0.10); C81(0.54)  LDD0727  [11]
 LDCM0411  CL23 HCT 116 C88(0.67); C81(0.75)  LDD0728  [11]
 LDCM0412  CL24 HCT 116 C88(0.16); C81(0.44)  LDD0729  [11]
 LDCM0413  CL25 HCT 116 C81(0.57); C88(0.28)  LDD0730  [11]
 LDCM0414  CL26 HCT 116 C81(0.90); C88(0.67)  LDD0731  [11]
 LDCM0415  CL27 HCT 116 C81(0.94); C88(0.90)  LDD0732  [11]
 LDCM0416  CL28 HCT 116 C81(0.74); C88(0.49)  LDD0733  [11]
 LDCM0417  CL29 HCT 116 C81(0.63); C88(0.39)  LDD0734  [11]
 LDCM0418  CL3 HCT 116 C81(1.09); C88(1.11)  LDD0735  [11]
 LDCM0419  CL30 HCT 116 C81(0.93); C88(0.88)  LDD0736  [11]
 LDCM0420  CL31 HCT 116 C81(0.99); C88(1.00)  LDD0737  [11]
 LDCM0421  CL32 HCT 116 C81(0.95); C88(0.86)  LDD0738  [11]
 LDCM0422  CL33 HCT 116 C81(0.91); C88(0.89)  LDD0739  [11]
 LDCM0423  CL34 HCT 116 C81(0.43); C88(0.27)  LDD0740  [11]
 LDCM0424  CL35 HCT 116 C81(0.54); C88(0.24)  LDD0741  [11]
 LDCM0425  CL36 HCT 116 C81(0.60); C88(0.45)  LDD0742  [11]
 LDCM0426  CL37 HCT 116 C81(0.41); C88(0.20)  LDD0743  [11]
 LDCM0428  CL39 HCT 116 C81(0.48); C88(0.32)  LDD0745  [11]
 LDCM0429  CL4 HCT 116 C81(0.95); C88(1.03)  LDD0746  [11]
 LDCM0430  CL40 HCT 116 C81(0.73); C88(0.46)  LDD0747  [11]
 LDCM0431  CL41 HCT 116 C81(0.77); C88(0.60)  LDD0748  [11]
 LDCM0432  CL42 HCT 116 C81(0.41); C88(0.12)  LDD0749  [11]
 LDCM0433  CL43 HCT 116 C81(0.42); C88(0.15)  LDD0750  [11]
 LDCM0434  CL44 HCT 116 C81(0.64); C88(0.53)  LDD0751  [11]
 LDCM0435  CL45 HCT 116 C81(0.43); C88(0.25)  LDD0752  [11]
 LDCM0436  CL46 HCT 116 C81(1.00)  LDD0753  [11]
 LDCM0437  CL47 HCT 116 C81(0.91)  LDD0754  [11]
 LDCM0438  CL48 HCT 116 C81(0.98)  LDD0755  [11]
 LDCM0439  CL49 HCT 116 C81(0.95)  LDD0756  [11]
 LDCM0440  CL5 HCT 116 C81(0.92); C88(0.90)  LDD0757  [11]
 LDCM0441  CL50 HCT 116 C81(0.94)  LDD0758  [11]
 LDCM0442  CL51 HCT 116 C81(0.92)  LDD0759  [11]
 LDCM0443  CL52 HCT 116 C81(0.94)  LDD0760  [11]
 LDCM0444  CL53 HCT 116 C81(1.37)  LDD0761  [11]
 LDCM0445  CL54 HCT 116 C81(0.94)  LDD0762  [11]
 LDCM0446  CL55 HCT 116 C81(0.88)  LDD0763  [11]
 LDCM0447  CL56 HCT 116 C81(1.10)  LDD0764  [11]
 LDCM0448  CL57 HCT 116 C81(1.13)  LDD0765  [11]
 LDCM0449  CL58 HCT 116 C81(1.01)  LDD0766  [11]
 LDCM0450  CL59 HCT 116 C81(0.96)  LDD0767  [11]
 LDCM0451  CL6 HCT 116 C81(0.73); C88(0.67)  LDD0768  [11]
 LDCM0452  CL60 HCT 116 C81(0.95)  LDD0769  [11]
 LDCM0453  CL61 HCT 116 C81(0.95); C88(1.00)  LDD0770  [11]
 LDCM0454  CL62 HCT 116 C81(0.90); C88(0.91)  LDD0771  [11]
 LDCM0455  CL63 HCT 116 C81(0.85); C88(0.85)  LDD0772  [11]
 LDCM0456  CL64 HCT 116 C81(0.63); C88(0.53)  LDD0773  [11]
 LDCM0457  CL65 HCT 116 C81(0.92); C88(0.91)  LDD0774  [11]
 LDCM0458  CL66 HCT 116 C81(0.45); C88(0.17)  LDD0775  [11]
 LDCM0459  CL67 HCT 116 C81(0.58); C88(0.47)  LDD0776  [11]
 LDCM0460  CL68 HCT 116 C81(0.90); C88(0.69)  LDD0777  [11]
 LDCM0461  CL69 HCT 116 C81(1.02); C88(1.03)  LDD0778  [11]
 LDCM0462  CL7 HCT 116 C81(0.46); C88(0.31)  LDD0779  [11]
 LDCM0463  CL70 HCT 116 C81(0.68); C88(0.57)  LDD0780  [11]
 LDCM0464  CL71 HCT 116 C81(0.83); C88(0.75)  LDD0781  [11]
 LDCM0465  CL72 HCT 116 C81(1.04); C88(1.04)  LDD0782  [11]
 LDCM0466  CL73 HCT 116 C81(0.79); C88(0.79)  LDD0783  [11]
 LDCM0467  CL74 HCT 116 C81(0.74); C88(0.62)  LDD0784  [11]
 LDCM0469  CL76 HCT 116 C81(0.89); C88(0.65)  LDD0786  [11]
 LDCM0470  CL77 HCT 116 C81(0.90); C88(0.62)  LDD0787  [11]
 LDCM0471  CL78 HCT 116 C81(0.86); C88(0.65)  LDD0788  [11]
 LDCM0472  CL79 HCT 116 C81(0.75); C88(0.29)  LDD0789  [11]
 LDCM0473  CL8 HCT 116 C81(0.39); C88(0.15)  LDD0790  [11]
 LDCM0474  CL80 HCT 116 C81(1.02); C88(0.82)  LDD0791  [11]
 LDCM0475  CL81 HCT 116 C81(0.95); C88(0.79)  LDD0792  [11]
 LDCM0476  CL82 HCT 116 C81(0.48); C88(0.08)  LDD0793  [11]
 LDCM0477  CL83 HCT 116 C81(0.62); C88(0.16)  LDD0794  [11]
 LDCM0478  CL84 HCT 116 C81(0.40); C88(0.07)  LDD0795  [11]
 LDCM0479  CL85 HCT 116 C81(0.83); C88(0.66)  LDD0796  [11]
 LDCM0480  CL86 HCT 116 C81(1.14); C88(1.27)  LDD0797  [11]
 LDCM0481  CL87 HCT 116 C81(0.90); C88(0.83)  LDD0798  [11]
 LDCM0482  CL88 HCT 116 C81(0.50); C88(0.18)  LDD0799  [11]
 LDCM0483  CL89 HCT 116 C81(0.57); C88(0.08)  LDD0800  [11]
 LDCM0484  CL9 HCT 116 C81(0.86); C88(0.65)  LDD0801  [11]
 LDCM0485  CL90 HCT 116 C81(0.92); C88(0.77)  LDD0802  [11]
 LDCM0486  CL91 HCT 116 C81(1.48); C88(1.01)  LDD0803  [11]
 LDCM0487  CL92 HCT 116 C81(1.14); C88(0.94)  LDD0804  [11]
 LDCM0488  CL93 HCT 116 C81(0.98); C88(0.89)  LDD0805  [11]
 LDCM0489  CL94 HCT 116 C81(1.10); C88(0.70)  LDD0806  [11]
 LDCM0490  CL95 HCT 116 C81(1.08); C88(0.82)  LDD0807  [11]
 LDCM0491  CL96 HCT 116 C81(1.20); C88(0.86)  LDD0808  [11]
 LDCM0492  CL97 HCT 116 C81(1.33); C88(0.89)  LDD0809  [11]
 LDCM0493  CL98 HCT 116 C81(0.95); C88(0.76)  LDD0810  [11]
 LDCM0494  CL99 HCT 116 C81(0.96); C88(0.76)  LDD0811  [11]
 LDCM0495  E2913 HEK-293T C221(1.06); C309(0.85); C473(0.97); C81(0.96)  LDD1698  [23]
 LDCM0213  Electrophilic fragment 2 MDA-MB-231 C81(0.98); C221(0.66)  LDD1702  [6]
 LDCM0468  Fragment33 HCT 116 C81(0.91); C88(0.70)  LDD0785  [11]
 LDCM0427  Fragment51 HCT 116 C81(0.36); C88(0.12)  LDD0744  [11]
 LDCM0116  HHS-0101 DM93 Y37(0.96); Y560(0.99)  LDD0264  [9]
 LDCM0117  HHS-0201 DM93 Y560(0.61); Y37(1.03)  LDD0265  [9]
 LDCM0118  HHS-0301 DM93 Y560(0.68); Y37(0.92)  LDD0266  [9]
 LDCM0119  HHS-0401 DM93 Y560(0.63); Y37(0.98)  LDD0267  [9]
 LDCM0120  HHS-0701 DM93 Y560(0.73); Y37(1.10)  LDD0268  [9]
 LDCM0107  IAA HeLa H660(0.00); H79(0.00)  LDD0221  [10]
 LDCM0123  JWB131 DM93 Y37(0.70)  LDD0285  [8]
 LDCM0124  JWB142 DM93 Y37(0.92)  LDD0286  [8]
 LDCM0125  JWB146 DM93 Y37(1.69)  LDD0287  [8]
 LDCM0126  JWB150 DM93 Y37(20.00)  LDD0288  [8]
 LDCM0127  JWB152 DM93 Y37(13.31)  LDD0289  [8]
 LDCM0128  JWB198 DM93 Y37(4.45)  LDD0290  [8]
 LDCM0129  JWB202 DM93 Y37(0.37)  LDD0291  [8]
 LDCM0130  JWB211 DM93 Y37(1.10)  LDD0292  [8]
 LDCM0022  KB02 HCT 116 C81(1.49)  LDD0080  [11]
 LDCM0023  KB03 HCT 116 C81(1.20)  LDD0081  [11]
 LDCM0024  KB05 HCT 116 C81(1.43)  LDD0082  [11]
 LDCM0109  NEM HeLa H660(0.00); H79(0.00); H480(0.00)  LDD0223  [10]
 LDCM0500  Nucleophilic fragment 13a MDA-MB-231 C221(1.16)  LDD2093  [6]
 LDCM0505  Nucleophilic fragment 15b MDA-MB-231 C221(1.06)  LDD2098  [6]
 LDCM0506  Nucleophilic fragment 16a MDA-MB-231 C221(0.86)  LDD2099  [6]
 LDCM0516  Nucleophilic fragment 21a MDA-MB-231 C221(0.74)  LDD2109  [6]
 LDCM0518  Nucleophilic fragment 22a MDA-MB-231 C221(1.10)  LDD2111  [6]
 LDCM0529  Nucleophilic fragment 27b MDA-MB-231 C473(0.65)  LDD2122  [6]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C221(0.87)  LDD2125  [6]
 LDCM0542  Nucleophilic fragment 37 MDA-MB-231 C221(1.01)  LDD2135  [6]
 LDCM0550  Nucleophilic fragment 5a MDA-MB-231 C221(2.13)  LDD2144  [6]
 LDCM0552  Nucleophilic fragment 6a MDA-MB-231 C221(0.92)  LDD2146  [6]
 LDCM0554  Nucleophilic fragment 7a MDA-MB-231 C221(5.92)  LDD2148  [6]
 LDCM0556  Nucleophilic fragment 8a MDA-MB-231 C221(0.67)  LDD2150  [6]
 LDCM0021  THZ1 HCT 116 C81(0.91)  LDD2173  [11]

References

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2 Cyclopropenone, Cyclopropeniminium Ion, and Cyclopropenethione as Novel Electrophilic Warheads for Potential Target Discovery of Triple-Negative Breast Cancer. J Med Chem. 2023 Feb 23;66(4):2851-2864. doi: 10.1021/acs.jmedchem.2c01889. Epub 2023 Feb 10.
3 Chemoproteomic profiling of kinases in live cells using electrophilic sulfonyl triazole probes. Chem Sci. 2021 Jan 21;12(9):3295-3307. doi: 10.1039/d0sc06623k.
4 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
5 A chemical proteomics approach for global mapping of functional lysines on cell surface of living cell. Nat Commun. 2024 Apr 8;15(1):2997. doi: 10.1038/s41467-024-47033-w.
Mass spectrometry data entry: PXD042888
6 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
7 Chemoproteomic capture of RNA binding activity in living cells. Nat Commun. 2023 Oct 7;14(1):6282. doi: 10.1038/s41467-023-41844-z.
Mass spectrometry data entry: PXD044625
8 Chemoproteomic profiling of kinases in live cells using electrophilic sulfonyl triazole probes. Chem Sci. 2021 Jan 21;12(9):3295-3307. doi: 10.1039/d0sc06623k.
9 Discovery of a Cell-Active SuTEx Ligand of Prostaglandin Reductase 2. Chembiochem. 2021 Jun 15;22(12):2134-2139. doi: 10.1002/cbic.202000879. Epub 2021 Apr 29.
10 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
11 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
12 Targeted Proteomic Approaches for Proteome-Wide Characterizations of the AMP-Binding Capacities of Kinases. J Proteome Res. 2022 Aug 5;21(8):2063-2070. doi: 10.1021/acs.jproteome.2c00225. Epub 2022 Jul 12.
13 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
14 SP3-Enabled Rapid and High Coverage Chemoproteomic Identification of Cell-State-Dependent Redox-Sensitive Cysteines. Mol Cell Proteomics. 2022 Apr;21(4):100218. doi: 10.1016/j.mcpro.2022.100218. Epub 2022 Feb 25.
Mass spectrometry data entry: PXD029500 , PXD031647
15 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
16 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
17 Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling. Anal Chem. 2021 Feb 2;93(4):2610-2618. doi: 10.1021/acs.analchem.0c04726. Epub 2021 Jan 20.
Mass spectrometry data entry: PXD022279
18 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
19 Tunable Amine-Reactive Electrophiles for Selective Profiling of Lysine. Angew Chem Int Ed Engl. 2022 Jan 26;61(5):e202112107. doi: 10.1002/anie.202112107. Epub 2021 Dec 16.
20 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
21 Global profiling identifies a stress-responsive tyrosine site on EDC3 regulating biomolecular condensate formation. Cell Chem Biol. 2022 Dec 15;29(12):1709-1720.e7. doi: 10.1016/j.chembiol.2022.11.008. Epub 2022 Dec 6.
Mass spectrometry data entry: PXD038010
22 Design and synthesis of minimalist terminal alkyne-containing diazirine photo-crosslinkers and their incorporation into kinase inhibitors for cell- and tissue-based proteome profiling. Angew Chem Int Ed Engl. 2013 Aug 12;52(33):8551-6. doi: 10.1002/anie.201300683. Epub 2013 Jun 10.
23 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402