Details of the Target

General Information of Target

Target ID LDTP01186
Target Name Vacuolar protein sorting-associated protein 4B (VPS4B)
Gene Name VPS4B
Gene ID 9525
Synonyms
SKD1; VPS42; Vacuolar protein sorting-associated protein 4B; EC 3.6.4.6; Cell migration-inducing gene 1 protein; Suppressor of K(+) transport growth defect 1; Protein SKD1
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRA
KCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQL
QGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGK
SYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLC
GSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPL
PEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSAT
HFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMSDMLRSLSN
TKPTVNEHDLLKLKKFTEDFGQEG
Target Bioclass
Enzyme
Family
AAA ATPase family
Subcellular location
Late endosome membrane
Function
Involved in late steps of the endosomal multivesicular bodies (MVB) pathway. Recognizes membrane-associated ESCRT-III assemblies and catalyzes their ATP-dependent disassembly, possibly in combination with membrane fission. Redistributes the ESCRT-III components to the cytoplasm for further rounds of MVB sorting. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. VPS4A/B are required for the exosomal release of SDCBP, CD63 and syndecan.; (Microbial infection) In conjunction with the ESCRT machinery also appears to function in topologically equivalent membrane fission events, such as the terminal stages of cytokinesis and enveloped virus budding (HIV-1 and other lentiviruses).
Uniprot ID
O75351
Ensemble ID
ENST00000238497.10
HGNC ID
HGNC:10895
ChEMBL ID
CHEMBL2311229

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 24 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info  		13.20  LDD0402  [1]
TH211
 Probe Info  		Y47(8.40)  LDD0260  [2]
STPyne
 Probe Info  		K432(7.35); K61(7.77); K77(10.00); K82(3.23)  LDD0277  [3]
BTD
 Probe Info  		C62(0.62)  LDD2091  [4]
HHS-475
 Probe Info  		Y27(0.83); Y47(0.86)  LDD0264  [5]
Acrolein
 Probe Info  		N.A.  LDD0222  [6]
DBIA
 Probe Info  		C240(0.86)  LDD0531  [7]
5E-2FA
 Probe Info  		H158(0.00); H304(0.00); H428(0.00)  LDD2235  [8]
ATP probe
 Probe Info  		K432(0.00); K434(0.00); K10(0.00); K17(0.00)  LDD0199  [9]
4-Iodoacetamidophenylacetylene
 Probe Info  		C384(0.00); C62(0.00); C240(0.00)  LDD0038  [10]
IA-alkyne
 Probe Info  		N.A.  LDD0032  [11]
IPIAA_H
 Probe Info  		N.A.  LDD0030  [12]
IPIAA_L
 Probe Info  		C240(0.00); C384(0.00)  LDD0031  [12]
Lodoacetamide azide
 Probe Info  		C384(0.00); C62(0.00); C240(0.00)  LDD0037  [10]
ATP probe
 Probe Info  		N.A.  LDD0035  [13]
IPM
 Probe Info  		N.A.  LDD0005  [14]
NHS
 Probe Info  		N.A.  LDD0010  [14]
SF
 Probe Info  		Y297(0.00); Y47(0.00)  LDD0028  [15]
TFBX
 Probe Info  		C62(0.00); C240(0.00)  LDD0148  [16]
1c-yne
 Probe Info  		N.A.  LDD0228  [17]
W1
 Probe Info  		N.A.  LDD0236  [18]
AOyne
 Probe Info  		15.00  LDD0443  [19]
NAIA_5
 Probe Info  		C62(0.00); C240(0.00)  LDD2223  [20]
HHS-482
 Probe Info  		Y27(1.30)  LDD2239  [21]
PAL-AfBPP Probe
Click To Hide/Show 1 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
FFF probe13
 Probe Info  		20.00  LDD0475  [22]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0548  1-(4-(Benzo[d][1,3]dioxol-5-ylmethyl)piperazin-1-yl)-2-nitroethan-1-one MDA-MB-231 C62(0.68)  LDD2142  [4]
 LDCM0524  2-Cyano-N-(2-morpholin-4-yl-ethyl)-acetamide MDA-MB-231 C62(1.17)  LDD2117  [4]
 LDCM0558  2-Cyano-N-phenylacetamide MDA-MB-231 C62(1.56)  LDD2152  [4]
 LDCM0214  AC1 HCT 116 C240(0.86)  LDD0531  [7]
 LDCM0215  AC10 HCT 116 C240(1.04)  LDD0532  [7]
 LDCM0216  AC100 HCT 116 C240(0.55)  LDD0533  [7]
 LDCM0217  AC101 HCT 116 C240(0.59)  LDD0534  [7]
 LDCM0218  AC102 HCT 116 C240(0.55)  LDD0535  [7]
 LDCM0219  AC103 HCT 116 C240(0.51)  LDD0536  [7]
 LDCM0220  AC104 HCT 116 C240(0.52)  LDD0537  [7]
 LDCM0221  AC105 HCT 116 C240(0.53)  LDD0538  [7]
 LDCM0222  AC106 HCT 116 C240(0.45)  LDD0539  [7]
 LDCM0223  AC107 HCT 116 C240(0.49)  LDD0540  [7]
 LDCM0224  AC108 HCT 116 C240(0.63)  LDD0541  [7]
 LDCM0225  AC109 HCT 116 C240(0.58)  LDD0542  [7]
 LDCM0226  AC11 HCT 116 C240(0.87)  LDD0543  [7]
 LDCM0227  AC110 HCT 116 C240(0.59)  LDD0544  [7]
 LDCM0228  AC111 HCT 116 C240(0.57)  LDD0545  [7]
 LDCM0229  AC112 HCT 116 C240(0.56)  LDD0546  [7]
 LDCM0237  AC12 HCT 116 C240(0.93)  LDD0554  [7]
 LDCM0246  AC128 HCT 116 C240(0.74)  LDD0563  [7]
 LDCM0247  AC129 HCT 116 C240(0.86)  LDD0564  [7]
 LDCM0249  AC130 HCT 116 C240(0.79)  LDD0566  [7]
 LDCM0250  AC131 HCT 116 C240(0.91)  LDD0567  [7]
 LDCM0251  AC132 HCT 116 C240(0.95)  LDD0568  [7]
 LDCM0252  AC133 HCT 116 C240(0.82)  LDD0569  [7]
 LDCM0253  AC134 HCT 116 C240(0.76)  LDD0570  [7]
 LDCM0254  AC135 HCT 116 C240(0.67)  LDD0571  [7]
 LDCM0255  AC136 HCT 116 C240(1.04)  LDD0572  [7]
 LDCM0256  AC137 HCT 116 C240(0.83)  LDD0573  [7]
 LDCM0257  AC138 HCT 116 C240(0.96)  LDD0574  [7]
 LDCM0258  AC139 HCT 116 C240(1.17)  LDD0575  [7]
 LDCM0259  AC14 HCT 116 C240(1.15)  LDD0576  [7]
 LDCM0260  AC140 HCT 116 C240(0.76)  LDD0577  [7]
 LDCM0261  AC141 HCT 116 C240(0.88)  LDD0578  [7]
 LDCM0262  AC142 HCT 116 C240(0.87)  LDD0579  [7]
 LDCM0263  AC143 HCT 116 C240(0.98)  LDD0580  [7]
 LDCM0264  AC144 HCT 116 C240(0.98)  LDD0581  [7]
 LDCM0265  AC145 HCT 116 C240(0.77)  LDD0582  [7]
 LDCM0266  AC146 HCT 116 C240(0.95)  LDD0583  [7]
 LDCM0267  AC147 HCT 116 C240(0.85)  LDD0584  [7]
 LDCM0268  AC148 HCT 116 C240(0.90)  LDD0585  [7]
 LDCM0269  AC149 HCT 116 C240(0.80)  LDD0586  [7]
 LDCM0270  AC15 HCT 116 C240(1.07)  LDD0587  [7]
 LDCM0271  AC150 HCT 116 C240(0.90)  LDD0588  [7]
 LDCM0272  AC151 HCT 116 C240(2.24)  LDD0589  [7]
 LDCM0273  AC152 HCT 116 C240(0.81)  LDD0590  [7]
 LDCM0274  AC153 HCT 116 C240(0.86)  LDD0591  [7]
 LDCM0621  AC154 HCT 116 C240(0.83)  LDD2158  [7]
 LDCM0622  AC155 HCT 116 C240(1.48)  LDD2159  [7]
 LDCM0623  AC156 HCT 116 C240(0.93)  LDD2160  [7]
 LDCM0624  AC157 HCT 116 C240(1.21)  LDD2161  [7]
 LDCM0276  AC17 HCT 116 C240(0.94)  LDD0593  [7]
 LDCM0277  AC18 HCT 116 C240(1.37)  LDD0594  [7]
 LDCM0278  AC19 HCT 116 C240(0.83)  LDD0595  [7]
 LDCM0279  AC2 HCT 116 C240(1.09)  LDD0596  [7]
 LDCM0280  AC20 HCT 116 C240(0.83)  LDD0597  [7]
 LDCM0281  AC21 HCT 116 C240(0.84)  LDD0598  [7]
 LDCM0282  AC22 HCT 116 C240(1.04)  LDD0599  [7]
 LDCM0283  AC23 HCT 116 C240(0.90)  LDD0600  [7]
 LDCM0284  AC24 HCT 116 C240(1.15)  LDD0601  [7]
 LDCM0285  AC25 HCT 116 C240(0.93)  LDD0602  [7]
 LDCM0286  AC26 HCT 116 C240(0.78)  LDD0603  [7]
 LDCM0287  AC27 HCT 116 C240(0.71)  LDD0604  [7]
 LDCM0288  AC28 HCT 116 C240(0.98)  LDD0605  [7]
 LDCM0289  AC29 HCT 116 C240(0.90)  LDD0606  [7]
 LDCM0290  AC3 HCT 116 C240(1.02)  LDD0607  [7]
 LDCM0291  AC30 HCT 116 C240(0.96)  LDD0608  [7]
 LDCM0292  AC31 HCT 116 C240(0.90)  LDD0609  [7]
 LDCM0293  AC32 HCT 116 C240(0.90)  LDD0610  [7]
 LDCM0294  AC33 HCT 116 C240(0.80)  LDD0611  [7]
 LDCM0295  AC34 HCT 116 C240(0.74)  LDD0612  [7]
 LDCM0296  AC35 HCT 116 C240(1.46)  LDD0613  [7]
 LDCM0297  AC36 HCT 116 C240(1.50)  LDD0614  [7]
 LDCM0298  AC37 HCT 116 C240(1.29)  LDD0615  [7]
 LDCM0299  AC38 HCT 116 C240(1.28)  LDD0616  [7]
 LDCM0300  AC39 HCT 116 C240(1.13)  LDD0617  [7]
 LDCM0301  AC4 HCT 116 C240(0.96)  LDD0618  [7]
 LDCM0302  AC40 HCT 116 C240(1.02)  LDD0619  [7]
 LDCM0303  AC41 HCT 116 C240(1.17)  LDD0620  [7]
 LDCM0304  AC42 HCT 116 C240(1.20)  LDD0621  [7]
 LDCM0305  AC43 HCT 116 C240(1.12)  LDD0622  [7]
 LDCM0306  AC44 HCT 116 C240(1.07)  LDD0623  [7]
 LDCM0307  AC45 HCT 116 C240(0.94)  LDD0624  [7]
 LDCM0308  AC46 PaTu 8988t C240(1.03)  LDD1187  [7]
 LDCM0309  AC47 PaTu 8988t C240(0.88)  LDD1188  [7]
 LDCM0310  AC48 PaTu 8988t C240(0.85)  LDD1189  [7]
 LDCM0311  AC49 PaTu 8988t C240(0.76)  LDD1190  [7]
 LDCM0312  AC5 HCT 116 C240(1.05)  LDD0629  [7]
 LDCM0313  AC50 PaTu 8988t C240(0.74)  LDD1192  [7]
 LDCM0314  AC51 PaTu 8988t C240(0.57)  LDD1193  [7]
 LDCM0315  AC52 PaTu 8988t C240(0.80)  LDD1194  [7]
 LDCM0316  AC53 PaTu 8988t C240(0.72)  LDD1195  [7]
 LDCM0317  AC54 PaTu 8988t C240(0.71)  LDD1196  [7]
 LDCM0318  AC55 PaTu 8988t C240(0.82)  LDD1197  [7]
 LDCM0319  AC56 PaTu 8988t C240(0.92)  LDD1198  [7]
 LDCM0320  AC57 HCT 116 C240(0.90)  LDD0637  [7]
 LDCM0321  AC58 HCT 116 C240(0.85)  LDD0638  [7]
 LDCM0322  AC59 HCT 116 C240(0.78)  LDD0639  [7]
 LDCM0323  AC6 HCT 116 C240(0.96)  LDD0640  [7]
 LDCM0324  AC60 HCT 116 C240(0.80)  LDD0641  [7]
 LDCM0325  AC61 HCT 116 C240(0.75)  LDD0642  [7]
 LDCM0326  AC62 HCT 116 C240(0.83)  LDD0643  [7]
 LDCM0327  AC63 HCT 116 C240(0.83)  LDD0644  [7]
 LDCM0328  AC64 HCT 116 C240(0.85)  LDD0645  [7]
 LDCM0329  AC65 HCT 116 C240(0.83)  LDD0646  [7]
 LDCM0330  AC66 HCT 116 C240(0.79)  LDD0647  [7]
 LDCM0331  AC67 HCT 116 C240(0.82)  LDD0648  [7]
 LDCM0332  AC68 HCT 116 C240(0.81)  LDD0649  [7]
 LDCM0333  AC69 HCT 116 C240(0.88)  LDD0650  [7]
 LDCM0334  AC7 HCT 116 C240(1.03)  LDD0651  [7]
 LDCM0335  AC70 HCT 116 C240(0.70)  LDD0652  [7]
 LDCM0336  AC71 HCT 116 C240(0.92)  LDD0653  [7]
 LDCM0337  AC72 HCT 116 C240(0.85)  LDD0654  [7]
 LDCM0338  AC73 HCT 116 C240(0.83)  LDD0655  [7]
 LDCM0339  AC74 HCT 116 C240(0.86)  LDD0656  [7]
 LDCM0340  AC75 HCT 116 C240(0.83)  LDD0657  [7]
 LDCM0341  AC76 HCT 116 C240(0.80)  LDD0658  [7]
 LDCM0342  AC77 HCT 116 C240(0.74)  LDD0659  [7]
 LDCM0343  AC78 HCT 116 C240(0.90)  LDD0660  [7]
 LDCM0344  AC79 HCT 116 C240(1.02)  LDD0661  [7]
 LDCM0345  AC8 HCT 116 C240(1.17)  LDD0662  [7]
 LDCM0346  AC80 HCT 116 C240(0.89)  LDD0663  [7]
 LDCM0347  AC81 HCT 116 C240(0.85)  LDD0664  [7]
 LDCM0348  AC82 HCT 116 C240(0.92)  LDD0665  [7]
 LDCM0349  AC83 HCT 116 C240(0.57)  LDD0666  [7]
 LDCM0350  AC84 HCT 116 C240(0.56)  LDD0667  [7]
 LDCM0351  AC85 HCT 116 C240(0.82)  LDD0668  [7]
 LDCM0352  AC86 HCT 116 C240(0.95)  LDD0669  [7]
 LDCM0353  AC87 HCT 116 C240(0.80)  LDD0670  [7]
 LDCM0354  AC88 HCT 116 C240(0.70)  LDD0671  [7]
 LDCM0355  AC89 HCT 116 C240(0.63)  LDD0672  [7]
 LDCM0357  AC90 HCT 116 C240(0.99)  LDD0674  [7]
 LDCM0358  AC91 HCT 116 C240(0.54)  LDD0675  [7]
 LDCM0359  AC92 HCT 116 C240(0.67)  LDD0676  [7]
 LDCM0360  AC93 HCT 116 C240(0.79)  LDD0677  [7]
 LDCM0361  AC94 HCT 116 C240(0.95)  LDD0678  [7]
 LDCM0362  AC95 HCT 116 C240(0.55)  LDD0679  [7]
 LDCM0363  AC96 HCT 116 C240(0.71)  LDD0680  [7]
 LDCM0364  AC97 HCT 116 C240(0.68)  LDD0681  [7]
 LDCM0365  AC98 HCT 116 C240(0.38)  LDD0682  [7]
 LDCM0366  AC99 HCT 116 C240(0.72)  LDD0683  [7]
 LDCM0545  Acetamide MDA-MB-231 C62(0.56)  LDD2138  [4]
 LDCM0520  AKOS000195272 MDA-MB-231 C62(1.07)  LDD2113  [4]
 LDCM0248  AKOS034007472 HCT 116 C240(1.07)  LDD0565  [7]
 LDCM0356  AKOS034007680 HCT 116 C240(0.98)  LDD0673  [7]
 LDCM0275  AKOS034007705 HCT 116 C240(0.85)  LDD0592  [7]
 LDCM0156  Aniline NCI-H1299 11.47  LDD0403  [1]
 LDCM0020  ARS-1620 HCC44 C240(1.09)  LDD2171  [7]
 LDCM0498  BS-3668 MDA-MB-231 C62(0.62)  LDD2091  [4]
 LDCM0108  Chloroacetamide HeLa N.A.  LDD0222  [6]
 LDCM0632  CL-Sc Hep-G2 C240(1.33)  LDD2227  [20]
 LDCM0367  CL1 HCT 116 C240(1.14)  LDD0684  [7]
 LDCM0368  CL10 HCT 116 C240(0.83)  LDD0685  [7]
 LDCM0369  CL100 HCT 116 C240(0.89)  LDD0686  [7]
 LDCM0370  CL101 HCT 116 C240(0.94)  LDD0687  [7]
 LDCM0371  CL102 HCT 116 C240(1.24)  LDD0688  [7]
 LDCM0372  CL103 HCT 116 C240(0.95)  LDD0689  [7]
 LDCM0373  CL104 HCT 116 C240(1.05)  LDD0690  [7]
 LDCM0374  CL105 HCT 116 C240(0.71)  LDD0691  [7]
 LDCM0375  CL106 HCT 116 C240(0.63)  LDD0692  [7]
 LDCM0376  CL107 HCT 116 C240(0.77)  LDD0693  [7]
 LDCM0377  CL108 HCT 116 C240(0.67)  LDD0694  [7]
 LDCM0378  CL109 HCT 116 C240(0.84)  LDD0695  [7]
 LDCM0379  CL11 HCT 116 C240(0.70)  LDD0696  [7]
 LDCM0380  CL110 HCT 116 C240(0.81)  LDD0697  [7]
 LDCM0381  CL111 HCT 116 C240(0.92)  LDD0698  [7]
 LDCM0382  CL112 HCT 116 C240(1.09)  LDD0699  [7]
 LDCM0383  CL113 HCT 116 C240(0.93)  LDD0700  [7]
 LDCM0384  CL114 HCT 116 C240(0.83)  LDD0701  [7]
 LDCM0385  CL115 HCT 116 C240(0.86)  LDD0702  [7]
 LDCM0386  CL116 HCT 116 C240(0.86)  LDD0703  [7]
 LDCM0387  CL117 HCT 116 C240(1.07)  LDD0704  [7]
 LDCM0388  CL118 HCT 116 C240(1.20)  LDD0705  [7]
 LDCM0389  CL119 HCT 116 C240(0.98)  LDD0706  [7]
 LDCM0390  CL12 HCT 116 C240(0.78)  LDD0707  [7]
 LDCM0391  CL120 HCT 116 C240(1.16)  LDD0708  [7]
 LDCM0392  CL121 PaTu 8988t C240(0.84)  LDD1271  [7]
 LDCM0393  CL122 PaTu 8988t C240(0.88)  LDD1272  [7]
 LDCM0394  CL123 PaTu 8988t C240(0.79)  LDD1273  [7]
 LDCM0395  CL124 PaTu 8988t C240(0.81)  LDD1274  [7]
 LDCM0396  CL125 HCT 116 C240(0.99)  LDD0713  [7]
 LDCM0397  CL126 HCT 116 C240(0.95)  LDD0714  [7]
 LDCM0398  CL127 HCT 116 C240(0.84)  LDD0715  [7]
 LDCM0399  CL128 HCT 116 C240(0.92)  LDD0716  [7]
 LDCM0400  CL13 HCT 116 C240(0.82)  LDD0717  [7]
 LDCM0401  CL14 HCT 116 C240(0.80)  LDD0718  [7]
 LDCM0402  CL15 HCT 116 C240(0.79)  LDD0719  [7]
 LDCM0403  CL16 HCT 116 C240(0.95)  LDD0720  [7]
 LDCM0404  CL17 HCT 116 C240(0.83)  LDD0721  [7]
 LDCM0405  CL18 HCT 116 C240(0.68)  LDD0722  [7]
 LDCM0406  CL19 HCT 116 C240(1.00)  LDD0723  [7]
 LDCM0407  CL2 HCT 116 C240(0.98)  LDD0724  [7]
 LDCM0408  CL20 HCT 116 C240(0.83)  LDD0725  [7]
 LDCM0409  CL21 HCT 116 C240(0.69)  LDD0726  [7]
 LDCM0410  CL22 HCT 116 C240(0.83)  LDD0727  [7]
 LDCM0411  CL23 HCT 116 C240(0.67)  LDD0728  [7]
 LDCM0412  CL24 HCT 116 C240(0.63)  LDD0729  [7]
 LDCM0413  CL25 HCT 116 C240(0.84)  LDD0730  [7]
 LDCM0414  CL26 HCT 116 C240(0.83)  LDD0731  [7]
 LDCM0415  CL27 HCT 116 C240(0.81)  LDD0732  [7]
 LDCM0416  CL28 HCT 116 C240(0.79)  LDD0733  [7]
 LDCM0417  CL29 HCT 116 C240(0.77)  LDD0734  [7]
 LDCM0418  CL3 HCT 116 C240(0.98)  LDD0735  [7]
 LDCM0419  CL30 HCT 116 C240(0.96)  LDD0736  [7]
 LDCM0420  CL31 HCT 116 C240(1.09)  LDD0737  [7]
 LDCM0421  CL32 HCT 116 C240(0.83)  LDD0738  [7]
 LDCM0422  CL33 HCT 116 C240(1.16)  LDD0739  [7]
 LDCM0423  CL34 HCT 116 C240(0.83)  LDD0740  [7]
 LDCM0424  CL35 HCT 116 C240(0.72)  LDD0741  [7]
 LDCM0425  CL36 HCT 116 C240(0.89)  LDD0742  [7]
 LDCM0426  CL37 HCT 116 C240(0.72)  LDD0743  [7]
 LDCM0428  CL39 HCT 116 C240(0.83)  LDD0745  [7]
 LDCM0429  CL4 HCT 116 C240(0.86)  LDD0746  [7]
 LDCM0430  CL40 HCT 116 C240(0.77)  LDD0747  [7]
 LDCM0431  CL41 HCT 116 C240(0.95)  LDD0748  [7]
 LDCM0432  CL42 HCT 116 C240(1.01)  LDD0749  [7]
 LDCM0433  CL43 HCT 116 C240(0.81)  LDD0750  [7]
 LDCM0434  CL44 HCT 116 C240(0.82)  LDD0751  [7]
 LDCM0435  CL45 HCT 116 C240(0.83)  LDD0752  [7]
 LDCM0436  CL46 HCT 116 C240(1.08)  LDD0753  [7]
 LDCM0437  CL47 HCT 116 C240(1.32)  LDD0754  [7]
 LDCM0438  CL48 HCT 116 C240(1.43)  LDD0755  [7]
 LDCM0439  CL49 HCT 116 C240(1.16)  LDD0756  [7]
 LDCM0440  CL5 HCT 116 C240(0.83)  LDD0757  [7]
 LDCM0441  CL50 HCT 116 C240(1.28)  LDD0758  [7]
 LDCM0442  CL51 HCT 116 C240(1.20)  LDD0759  [7]
 LDCM0443  CL52 HCT 116 C240(1.20)  LDD0760  [7]
 LDCM0444  CL53 HCT 116 C240(1.36)  LDD0761  [7]
 LDCM0445  CL54 HCT 116 C240(1.82)  LDD0762  [7]
 LDCM0446  CL55 HCT 116 C240(1.46)  LDD0763  [7]
 LDCM0447  CL56 HCT 116 C240(1.25)  LDD0764  [7]
 LDCM0448  CL57 HCT 116 C240(1.04)  LDD0765  [7]
 LDCM0449  CL58 HCT 116 C240(1.36)  LDD0766  [7]
 LDCM0450  CL59 HCT 116 C240(1.31)  LDD0767  [7]
 LDCM0451  CL6 HCT 116 C240(0.84)  LDD0768  [7]
 LDCM0452  CL60 HCT 116 C240(1.21)  LDD0769  [7]
 LDCM0453  CL61 PaTu 8988t C240(0.79)  LDD1332  [7]
 LDCM0454  CL62 PaTu 8988t C240(0.96)  LDD1333  [7]
 LDCM0455  CL63 PaTu 8988t C240(1.11)  LDD1334  [7]
 LDCM0456  CL64 PaTu 8988t C240(0.97)  LDD1335  [7]
 LDCM0457  CL65 PaTu 8988t C240(0.99)  LDD1336  [7]
 LDCM0458  CL66 PaTu 8988t C240(0.83)  LDD1337  [7]
 LDCM0459  CL67 PaTu 8988t C240(0.76)  LDD1338  [7]
 LDCM0460  CL68 PaTu 8988t C240(0.88)  LDD1339  [7]
 LDCM0461  CL69 PaTu 8988t C240(0.95)  LDD1340  [7]
 LDCM0462  CL7 HCT 116 C240(0.71)  LDD0779  [7]
 LDCM0463  CL70 PaTu 8988t C240(0.78)  LDD1342  [7]
 LDCM0464  CL71 PaTu 8988t C240(0.84)  LDD1343  [7]
 LDCM0465  CL72 PaTu 8988t C240(1.23)  LDD1344  [7]
 LDCM0466  CL73 PaTu 8988t C240(0.81)  LDD1345  [7]
 LDCM0467  CL74 PaTu 8988t C240(0.98)  LDD1346  [7]
 LDCM0469  CL76 HCT 116 C240(0.89)  LDD0786  [7]
 LDCM0470  CL77 HCT 116 C240(0.97)  LDD0787  [7]
 LDCM0471  CL78 HCT 116 C240(0.96)  LDD0788  [7]
 LDCM0472  CL79 HCT 116 C240(0.70)  LDD0789  [7]
 LDCM0473  CL8 HCT 116 C240(0.81)  LDD0790  [7]
 LDCM0474  CL80 HCT 116 C240(0.75)  LDD0791  [7]
 LDCM0475  CL81 HCT 116 C240(0.82)  LDD0792  [7]
 LDCM0476  CL82 HCT 116 C240(0.67)  LDD0793  [7]
 LDCM0477  CL83 HCT 116 C240(0.81)  LDD0794  [7]
 LDCM0478  CL84 HCT 116 C240(0.74)  LDD0795  [7]
 LDCM0479  CL85 HCT 116 C240(0.83)  LDD0796  [7]
 LDCM0480  CL86 HCT 116 C240(1.01)  LDD0797  [7]
 LDCM0481  CL87 HCT 116 C240(0.91)  LDD0798  [7]
 LDCM0482  CL88 HCT 116 C240(0.74)  LDD0799  [7]
 LDCM0483  CL89 HCT 116 C240(0.95)  LDD0800  [7]
 LDCM0484  CL9 HCT 116 C240(0.87)  LDD0801  [7]
 LDCM0485  CL90 HCT 116 C240(1.25)  LDD0802  [7]
 LDCM0486  CL91 HCT 116 C240(0.94)  LDD0803  [7]
 LDCM0487  CL92 HCT 116 C240(0.94)  LDD0804  [7]
 LDCM0488  CL93 HCT 116 C240(0.87)  LDD0805  [7]
 LDCM0489  CL94 HCT 116 C240(0.86)  LDD0806  [7]
 LDCM0490  CL95 HCT 116 C240(0.92)  LDD0807  [7]
 LDCM0491  CL96 HCT 116 C240(0.88)  LDD0808  [7]
 LDCM0492  CL97 HCT 116 C240(1.02)  LDD0809  [7]
 LDCM0493  CL98 HCT 116 C240(0.99)  LDD0810  [7]
 LDCM0494  CL99 HCT 116 C240(0.93)  LDD0811  [7]
 LDCM0495  E2913 HEK-293T C240(0.92)  LDD1698  [23]
 LDCM0468  Fragment33 PaTu 8988t C240(1.00)  LDD1347  [7]
 LDCM0427  Fragment51 HCT 116 C240(0.82)  LDD0744  [7]
 LDCM0116  HHS-0101 DM93 Y27(0.83); Y47(0.86)  LDD0264  [5]
 LDCM0117  HHS-0201 DM93 Y27(0.79); Y47(1.80)  LDD0265  [5]
 LDCM0118  HHS-0301 DM93 Y27(0.65); Y47(4.92)  LDD0266  [5]
 LDCM0119  HHS-0401 DM93 Y27(0.91); Y47(8.84)  LDD0267  [5]
 LDCM0120  HHS-0701 DM93 Y27(1.54); Y47(1.67)  LDD0268  [5]
 LDCM0015  HNE MDA-MB-231 C240(0.88)  LDD0346  [24]
 LDCM0022  KB02 HEK-293T C240(1.07); C384(1.19)  LDD1492  [23]
 LDCM0023  KB03 HEK-293T C240(0.97); C384(0.92)  LDD1497  [23]
 LDCM0024  KB05 IGR37 C240(3.11)  LDD3314  [25]
 LDCM0109  NEM HeLa N.A.  LDD0224  [6]
 LDCM0500  Nucleophilic fragment 13a MDA-MB-231 C62(1.03)  LDD2093  [4]
 LDCM0503  Nucleophilic fragment 14b MDA-MB-231 C62(0.20)  LDD2096  [4]
 LDCM0504  Nucleophilic fragment 15a MDA-MB-231 C62(0.80)  LDD2097  [4]
 LDCM0506  Nucleophilic fragment 16a MDA-MB-231 C62(1.12)  LDD2099  [4]
 LDCM0508  Nucleophilic fragment 17a MDA-MB-231 C62(0.82)  LDD2101  [4]
 LDCM0511  Nucleophilic fragment 18b MDA-MB-231 C62(0.63)  LDD2104  [4]
 LDCM0513  Nucleophilic fragment 19b MDA-MB-231 C62(0.16)  LDD2106  [4]
 LDCM0514  Nucleophilic fragment 20a MDA-MB-231 C62(1.07)  LDD2107  [4]
 LDCM0515  Nucleophilic fragment 20b MDA-MB-231 C62(0.79)  LDD2108  [4]
 LDCM0516  Nucleophilic fragment 21a MDA-MB-231 C62(0.53)  LDD2109  [4]
 LDCM0518  Nucleophilic fragment 22a MDA-MB-231 C62(1.28)  LDD2111  [4]
 LDCM0522  Nucleophilic fragment 24a MDA-MB-231 C62(0.37)  LDD2115  [4]
 LDCM0523  Nucleophilic fragment 24b MDA-MB-231 C62(0.37)  LDD2116  [4]
 LDCM0525  Nucleophilic fragment 25b MDA-MB-231 C62(0.41)  LDD2118  [4]
 LDCM0526  Nucleophilic fragment 26a MDA-MB-231 C62(2.16)  LDD2119  [4]
 LDCM0527  Nucleophilic fragment 26b MDA-MB-231 C62(0.54)  LDD2120  [4]
 LDCM0529  Nucleophilic fragment 27b MDA-MB-231 C62(0.25)  LDD2122  [4]
 LDCM0530  Nucleophilic fragment 28a MDA-MB-231 C62(0.98)  LDD2123  [4]
 LDCM0531  Nucleophilic fragment 28b MDA-MB-231 C62(0.23)  LDD2124  [4]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C62(0.98)  LDD2125  [4]
 LDCM0533  Nucleophilic fragment 29b MDA-MB-231 C62(0.29)  LDD2126  [4]
 LDCM0535  Nucleophilic fragment 30b MDA-MB-231 C62(0.60)  LDD2128  [4]
 LDCM0536  Nucleophilic fragment 31 MDA-MB-231 C62(1.14)  LDD2129  [4]
 LDCM0540  Nucleophilic fragment 35 MDA-MB-231 C62(0.51)  LDD2133  [4]
 LDCM0541  Nucleophilic fragment 36 MDA-MB-231 C62(0.43)  LDD2134  [4]
 LDCM0542  Nucleophilic fragment 37 MDA-MB-231 C62(1.85)  LDD2135  [4]
 LDCM0543  Nucleophilic fragment 38 MDA-MB-231 C62(1.44)  LDD2136  [4]
 LDCM0544  Nucleophilic fragment 39 MDA-MB-231 C62(0.94)  LDD2137  [4]
 LDCM0546  Nucleophilic fragment 40 MDA-MB-231 C62(0.80)  LDD2140  [4]
 LDCM0549  Nucleophilic fragment 43 MDA-MB-231 C62(0.46)  LDD2143  [4]
 LDCM0550  Nucleophilic fragment 5a MDA-MB-231 C62(2.81)  LDD2144  [4]
 LDCM0552  Nucleophilic fragment 6a MDA-MB-231 C62(0.96)  LDD2146  [4]
 LDCM0553  Nucleophilic fragment 6b MDA-MB-231 C62(1.17)  LDD2147  [4]
 LDCM0555  Nucleophilic fragment 7b MDA-MB-231 C62(0.22)  LDD2149  [4]
 LDCM0556  Nucleophilic fragment 8a MDA-MB-231 C62(0.60)  LDD2150  [4]
 LDCM0557  Nucleophilic fragment 8b MDA-MB-231 C62(0.27)  LDD2151  [4]
 LDCM0131  RA190 MM1.R C240(0.88)  LDD0304  [26]
 LDCM0021  THZ1 HCT 116 C240(1.09)  LDD2173  [7]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Katanin p60 ATPase-containing subunit A-like 1 (KATNAL1) AAA ATPase family Q9BW62
Transporter and channel
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Huntingtin (HTT) Huntingtin family P42858
Other
Click To Hide/Show 4 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Ataxin-1 (ATXN1) ATXN1 family P54253
Charged multivesicular body protein 1a (CHMP1A) SNF7 family Q9HD42
Charged multivesicular body protein 5 (CHMP5) SNF7 family Q9NZZ3
Abscission/NoCut checkpoint regulator (ZFYVE19) . Q96K21

References

1 Quantitative and Site-Specific Chemoproteomic Profiling of Targets of Acrolein. Chem Res Toxicol. 2019 Mar 18;32(3):467-473. doi: 10.1021/acs.chemrestox.8b00343. Epub 2019 Jan 15.
2 Chemoproteomic profiling of kinases in live cells using electrophilic sulfonyl triazole probes. Chem Sci. 2021 Jan 21;12(9):3295-3307. doi: 10.1039/d0sc06623k.
3 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
4 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
5 Discovery of a Cell-Active SuTEx Ligand of Prostaglandin Reductase 2. Chembiochem. 2021 Jun 15;22(12):2134-2139. doi: 10.1002/cbic.202000879. Epub 2021 Apr 29.
6 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
7 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
8 Global profiling of functional histidines in live cells using small-molecule photosensitizer and chemical probe relay labelling. Nat Chem. 2024 Jun 4. doi: 10.1038/s41557-024-01545-6. Online ahead of print.
Mass spectrometry data entry: PXD042377
9 Targeted Proteomic Approaches for Proteome-Wide Characterizations of the AMP-Binding Capacities of Kinases. J Proteome Res. 2022 Aug 5;21(8):2063-2070. doi: 10.1021/acs.jproteome.2c00225. Epub 2022 Jul 12.
10 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
11 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
12 SP3-Enabled Rapid and High Coverage Chemoproteomic Identification of Cell-State-Dependent Redox-Sensitive Cysteines. Mol Cell Proteomics. 2022 Apr;21(4):100218. doi: 10.1016/j.mcpro.2022.100218. Epub 2022 Feb 25.
Mass spectrometry data entry: PXD029500 , PXD031647
13 Comparison of Quantitative Mass Spectrometry Platforms for Monitoring Kinase ATP Probe Uptake in Lung Cancer. J Proteome Res. 2018 Jan 5;17(1):63-75. doi: 10.1021/acs.jproteome.7b00329. Epub 2017 Nov 22.
Mass spectrometry data entry: PXD006095 , PXD006096
14 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
15 Solid Phase Synthesis of Fluorosulfate Containing Macrocycles for Chemoproteomic Workflows. bioRxiv [Preprint]. 2023 Feb 18:2023.02.17.529022. doi: 10.1101/2023.02.17.529022.
Mass spectrometry data entry: PXD039931
16 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
17 Tunable Amine-Reactive Electrophiles for Selective Profiling of Lysine. Angew Chem Int Ed Engl. 2022 Jan 26;61(5):e202112107. doi: 10.1002/anie.202112107. Epub 2021 Dec 16.
18 Oxidant-Induced Bioconjugation for Protein Labeling in Live Cells. ACS Chem Biol. 2023 Jan 20;18(1):112-122. doi: 10.1021/acschembio.2c00740. Epub 2022 Dec 21.
19 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
20 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
21 Global targeting of functional tyrosines using sulfur-triazole exchange chemistry. Nat Chem Biol. 2020 Feb;16(2):150-159. doi: 10.1038/s41589-019-0404-5. Epub 2019 Nov 25.
22 Ligand and Target Discovery by Fragment-Based Screening in Human Cells. Cell. 2017 Jan 26;168(3):527-541.e29. doi: 10.1016/j.cell.2016.12.029. Epub 2017 Jan 19.
23 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
24 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
25 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
26 Physical and Functional Analysis of the Putative Rpn13 Inhibitor RA190. Cell Chem Biol. 2020 Nov 19;27(11):1371-1382.e6. doi: 10.1016/j.chembiol.2020.08.007. Epub 2020 Aug 27.