Details of the Probe

General Information of Probe

Probe ID
LDPC0275
Probe Name
C006
Synonyms
Z4225953546
Probe Type
PAL-AfBPP Probe
Structure
3D MOL 2D MOL
Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 354.4
Lipid-water partition coefficient (xlogp) 2.1
Rotatable Bond Count (rotbonds) 7
Hydrogen Bond Donor Count (hbonddonor) 1
Hydrogen Bond Acceptor Count (hbondacc) 5
Chemical Identifiers
Formula
C19H26N6O
IUPAC Name
N-[2-(3-but-3-ynyldiazirin-3-yl)ethyl]-3-cyclopentyl-4,5,6,7-tetrahydrobenzotriazole-5-carboxamide
Canonical SMILES
C#CCCC1(N=N1)CCNC(=O)C2CCC3=C(C2)N(N=N3)C4CCCC4
InChI
InChI=1S/C19H26N6O/c1-2-3-10-19(22-23-19)11-12-20-18(26)14-8-9-16-17(13-14)25(24-21-16)15-6-4-5-7-15/h1,14-15H,3-13H2,(H,20,26)
InChIKey
AJCGPDVUTMEEBC-UHFFFAOYSA-N

The Probe Interaction Atlas

Target(s) List of this Probe

30 Enzyme Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Adenosine kinase (ADK) LDTP04689 6.23  LDD1715 
Adenosine kinase (ADK) LDTP04689 6.23  LDD1715 
Apoptosis-inducing factor 1, mitochondrial (AIFM1) LDTP01687 6.15  LDD1715 
Apoptosis-inducing factor 1, mitochondrial (AIFM1) LDTP01687 6.15  LDD1715 
Beta-galactosidase (GLB1) LDTP02837 8.51  LDD1715 
Beta-galactosidase (GLB1) LDTP02837 8.51  LDD1715 
DCN1-like protein 4 (DCUN1D4) LDTP09799 5.28  LDD1715 
DCN1-like protein 4 (DCUN1D4) LDTP09799 5.28  LDD1715 
dCTP pyrophosphatase 1 (DCTPP1) LDTP12013 6.32  LDD1715 
dCTP pyrophosphatase 1 (DCTPP1) LDTP12013 6.32  LDD1715 
Delta(24)-sterol reductase (DHCR24) LDTP06375 5.06  LDD1715 
Delta(24)-sterol reductase (DHCR24) LDTP06375 5.06  LDD1715 
E3 ubiquitin-protein ligase UBR2 (UBR2) LDTP08565 6.41  LDD1715 
E3 ubiquitin-protein ligase UBR2 (UBR2) LDTP08565 6.41  LDD1715 
Epoxide hydrolase 1 (EPHX1) LDTP02175 15.03  LDD1715 
Epoxide hydrolase 1 (EPHX1) LDTP02175 15.03  LDD1715 
Lanosterol synthase (LSS) LDTP04183 6.32  LDD1715 
Lanosterol synthase (LSS) LDTP04183 6.32  LDD1715 
N-alpha-acetyltransferase 40 (NAA40) LDTP08265 10.06  LDD1715 
N-alpha-acetyltransferase 40 (NAA40) LDTP08265 10.06  LDD1715 
Palmitoyl-protein thioesterase ABHD10, mitochondrial (ABHD10) LDTP12628 9.92  LDD1715 
Palmitoyl-protein thioesterase ABHD10, mitochondrial (ABHD10) LDTP12628 9.92  LDD1715 
Prostaglandin reductase 1 (PTGR1) LDTP06227 9.71  LDD1715 
Prostaglandin reductase 1 (PTGR1) LDTP06227 9.71  LDD1715 
Prostaglandin reductase 3 (PTGR3) LDTP15422 8.69  LDD1715 
Prostaglandin reductase 3 (PTGR3) LDTP15422 8.69  LDD1715 
Proteasome subunit beta type-2 (PSMB2) LDTP04285 4.99  LDD1715 
Proteasome subunit beta type-2 (PSMB2) LDTP04285 4.99  LDD1715 
Puromycin-sensitive aminopeptidase (NPEPPS) LDTP04712 5.90  LDD1715 
Puromycin-sensitive aminopeptidase (NPEPPS) LDTP04712 5.90  LDD1715 
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⏷ Show the Full List of 30 Enzyme
20 Transporter and channel Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Cytochrome c oxidase subunit 7A2, mitochondrial (COX7A2) LDTP02724 5.35  LDD1715 
Cytochrome c oxidase subunit 7A2, mitochondrial (COX7A2) LDTP02724 5.35  LDD1715 
Major facilitator superfamily domain-containing protein 3 (MFSD3) LDTP18153 6.28  LDD1715 
Major facilitator superfamily domain-containing protein 3 (MFSD3) LDTP18153 6.28  LDD1715 
Mitochondrial 2-oxodicarboxylate carrier (SLC25A21) LDTP11095 26.35  LDD1715 
Mitochondrial 2-oxodicarboxylate carrier (SLC25A21) LDTP11095 26.35  LDD1715 
Mitochondrial 2-oxoglutarate/malate carrier protein (SLC25A11) LDTP05384 5.17  LDD1715 
Mitochondrial 2-oxoglutarate/malate carrier protein (SLC25A11) LDTP05384 5.17  LDD1715 
Mitochondrial import inner membrane translocase subunit TIM44 (TIMM44) LDTP00821 6.50  LDD1715 
Mitochondrial import inner membrane translocase subunit TIM44 (TIMM44) LDTP00821 6.50  LDD1715 
Mitochondrial S-adenosylmethionine carrier protein (SLC25A26) LDTP07885 5.66  LDD1715 
Mitochondrial S-adenosylmethionine carrier protein (SLC25A26) LDTP07885 5.66  LDD1715 
Mpv17-like protein 2 (MPV17L2) LDTP14952 8.17  LDD1715 
Mpv17-like protein 2 (MPV17L2) LDTP14952 8.17  LDD1715 
Sigma non-opioid intracellular receptor 1 (SIGMAR1) LDTP10958 17.75  LDD1715 
Sigma non-opioid intracellular receptor 1 (SIGMAR1) LDTP10958 17.75  LDD1715 
Solute carrier family 25 member 33 (SLC25A33) LDTP11162 5.43  LDD1715 
Solute carrier family 25 member 33 (SLC25A33) LDTP11162 5.43  LDD1715 
Transmembrane protein 126A (TMEM126A) LDTP15948 5.17  LDD1715 
Transmembrane protein 126A (TMEM126A) LDTP15948 5.17  LDD1715 
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⏷ Show the Full List of 20 Transporter and channel
6 Other Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Brain-specific angiogenesis inhibitor 1-associated protein 2 (BAIAP2) LDTP13755 8.40  LDD1715 
Brain-specific angiogenesis inhibitor 1-associated protein 2 (BAIAP2) LDTP13755 8.40  LDD1715 
Neuferricin (CYB5D2) LDTP15623 5.43  LDD1715 
Neuferricin (CYB5D2) LDTP15623 5.43  LDD1715 
Protein unc-119 homolog B (UNC119B) LDTP00105 6.32  LDD1715 
Protein unc-119 homolog B (UNC119B) LDTP00105 6.32  LDD1715 
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⏷ Show the Full List of 6 Other

Full Information of The Labelling Profiles of This Probe

Quantification: AfBPP Probe vs Negative Probe
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
Probe:50uM; negative probe:50uM
Quantitative Method
TMT
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Peripheral blood
Disease Model
Normal
Model Name
Human normal cells (HEK-293T)
Note
Negative probe:C#CCCC1(CCC(NC)=O)N=N1
Interaction Atlas ID
 LDD1715 
Download The Altas

References

1 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587