Details of the Target

General Information of Target

Target ID LDTP13369
Target Name Rab5 GDP/GTP exchange factor (RABGEF1)
Gene Name RABGEF1
Gene ID 27342
Synonyms
RABEX5; Rab5 GDP/GTP exchange factor; RAP1; Rabaptin-5-associated exchange factor for Rab5; Rabex-5
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MGLPRGSFFWLLLLLTAACSGLLFALYFSAVQRYPGPAAGARDTTSFEAFFQSKASNSWT
GKGQACRHLLHLAIQRHPHFRGLFNLSIPVLLWGDLFTPALWDRLSQHKAPYGWRGLSHQ
VIASTLSLLNGSESAKLFAPPRDTPPKCIRCAVVGNGGILNGSRQGPNIDAHDYVFRLNG
AVIKGFERDVGTKTSFYGFTVNTMKNSLVSYWNLGFTSVPQGQDLQYIFIPSDIRDYVML
RSAILGVPVPEGLDKGDRPHAYFGPEASASKFKLLHPDFISYLTERFLKSKLINTHFGDL
YMPSTGALMLLTALHTCDQVSAYGFITSNYWKFSDHYFERKMKPLIFYANHDLSLEAALW
RDLHKAGILQLYQR
Target Bioclass
Transporter and channel
Subcellular location
Cytoplasm
Function
Rab effector protein acting as linker between gamma-adaptin, RAB4A or RAB5A. Involved in endocytic membrane fusion and membrane trafficking of recycling endosomes. Stimulates nucleotide exchange on RAB5A. Can act as a ubiquitin ligase.
Uniprot ID
Q9UJ41
Ensemble ID
ENST00000284957.9
HGNC ID
HGNC:17676

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 12 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info  		12.65  LDD0402  [1]
Probe 1
 Probe Info  		Y384(7.90)  LDD3495  [2]
JZ128-DTB
 Probe Info  		N.A.  LDD0462  [3]
DBIA
 Probe Info  		C359(1.00); C161(0.95); C173(0.86)  LDD0078  [4]
4-Iodoacetamidophenylacetylene
 Probe Info  		C181(0.00); C19(0.00); C404(0.00); C225(0.00)  LDD0038  [5]
IA-alkyne
 Probe Info  		C290(0.00); C404(0.00); C225(0.00)  LDD0036  [5]
Lodoacetamide azide
 Probe Info  		C290(0.00); C181(0.00); C404(0.00); C225(0.00)  LDD0037  [5]
NAIA_4
 Probe Info  		C181(0.00); C404(0.00)  LDD2226  [6]
IPM
 Probe Info  		N.A.  LDD2156  [7]
TFBX
 Probe Info  		N.A.  LDD0148  [8]
AOyne
 Probe Info  		12.10  LDD0443  [9]
NAIA_5
 Probe Info  		C19(0.00); C404(0.00); C225(0.00); C254(0.00)  LDD2223  [6]
PAL-AfBPP Probe
Click To Hide/Show 1 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
C228
 Probe Info  		14.72  LDD1901  [10]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0025  4SU-RNA HEK-293T C621(11.33)  LDD0371  [11]
 LDCM0026  4SU-RNA+native RNA HEK-293T C621(3.70)  LDD0372  [11]
 LDCM0214  AC1 HCT 116 C161(1.10); C173(1.10)  LDD0531  [4]
 LDCM0215  AC10 HCT 116 C161(0.96); C173(0.96); C621(1.10)  LDD0532  [4]
 LDCM0216  AC100 HCT 116 C161(0.71); C173(0.71)  LDD0533  [4]
 LDCM0217  AC101 HCT 116 C161(0.82); C173(0.82)  LDD0534  [4]
 LDCM0218  AC102 HCT 116 C161(0.85); C173(0.85)  LDD0535  [4]
 LDCM0219  AC103 HCT 116 C161(0.84); C173(0.84)  LDD0536  [4]
 LDCM0220  AC104 HCT 116 C161(0.76); C173(0.76)  LDD0537  [4]
 LDCM0221  AC105 HCT 116 C161(0.98); C173(0.98)  LDD0538  [4]
 LDCM0222  AC106 HCT 116 C161(0.95); C173(0.95)  LDD0539  [4]
 LDCM0223  AC107 HCT 116 C161(0.83); C173(0.92)  LDD0540  [4]
 LDCM0224  AC108 HCT 116 C161(0.77); C173(0.76)  LDD0541  [4]
 LDCM0225  AC109 HCT 116 C161(0.76); C173(0.74)  LDD0542  [4]
 LDCM0226  AC11 HCT 116 C161(1.05); C173(1.05); C621(1.01)  LDD0543  [4]
 LDCM0227  AC110 HCT 116 C161(0.97); C173(0.92)  LDD0544  [4]
 LDCM0228  AC111 HCT 116 C161(0.95); C173(0.96)  LDD0545  [4]
 LDCM0229  AC112 HCT 116 C161(0.89); C173(0.90)  LDD0546  [4]
 LDCM0230  AC113 HCT 116 C161(0.94); C173(0.94)  LDD0547  [4]
 LDCM0231  AC114 HCT 116 C161(0.93); C173(0.93)  LDD0548  [4]
 LDCM0232  AC115 HCT 116 C161(0.95); C173(0.95)  LDD0549  [4]
 LDCM0233  AC116 HCT 116 C161(0.96); C173(0.96)  LDD0550  [4]
 LDCM0234  AC117 HCT 116 C161(1.00); C173(1.00)  LDD0551  [4]
 LDCM0235  AC118 HCT 116 C161(0.83); C173(0.83)  LDD0552  [4]
 LDCM0236  AC119 HCT 116 C161(0.91); C173(0.91)  LDD0553  [4]
 LDCM0237  AC12 HCT 116 C161(0.93); C173(0.93); C621(0.95)  LDD0554  [4]
 LDCM0238  AC120 HCT 116 C161(0.97); C173(0.97)  LDD0555  [4]
 LDCM0239  AC121 HCT 116 C161(0.83); C173(0.83)  LDD0556  [4]
 LDCM0240  AC122 HCT 116 C161(0.89); C173(0.89)  LDD0557  [4]
 LDCM0241  AC123 HCT 116 C161(0.81); C173(0.81)  LDD0558  [4]
 LDCM0242  AC124 HCT 116 C161(0.92); C173(0.92)  LDD0559  [4]
 LDCM0243  AC125 HCT 116 C161(0.88); C173(0.88)  LDD0560  [4]
 LDCM0244  AC126 HCT 116 C161(0.98); C173(0.98)  LDD0561  [4]
 LDCM0245  AC127 HCT 116 C161(0.85); C173(0.85)  LDD0562  [4]
 LDCM0246  AC128 HCT 116 C161(0.91); C173(0.91)  LDD0563  [4]
 LDCM0247  AC129 HCT 116 C161(0.87); C173(0.87)  LDD0564  [4]
 LDCM0249  AC130 HCT 116 C161(0.76); C173(0.76)  LDD0566  [4]
 LDCM0250  AC131 HCT 116 C161(0.86); C173(0.86)  LDD0567  [4]
 LDCM0251  AC132 HCT 116 C161(0.67); C173(0.67)  LDD0568  [4]
 LDCM0252  AC133 HCT 116 C161(0.71); C173(0.71)  LDD0569  [4]
 LDCM0253  AC134 HCT 116 C161(0.71); C173(0.71)  LDD0570  [4]
 LDCM0254  AC135 HCT 116 C161(0.68); C173(0.68)  LDD0571  [4]
 LDCM0255  AC136 HCT 116 C161(0.79); C173(0.79)  LDD0572  [4]
 LDCM0256  AC137 HCT 116 C161(0.68); C173(0.68)  LDD0573  [4]
 LDCM0257  AC138 HCT 116 C161(0.73); C173(0.73)  LDD0574  [4]
 LDCM0258  AC139 HCT 116 C161(0.65); C173(0.65)  LDD0575  [4]
 LDCM0259  AC14 HCT 116 C161(0.96); C173(0.96); C621(1.05)  LDD0576  [4]
 LDCM0260  AC140 HCT 116 C161(0.65); C173(0.65)  LDD0577  [4]
 LDCM0261  AC141 HCT 116 C161(0.69); C173(0.69)  LDD0578  [4]
 LDCM0262  AC142 HCT 116 C161(0.65); C173(0.65)  LDD0579  [4]
 LDCM0263  AC143 HCT 116 C161(0.86); C173(0.86)  LDD0580  [4]
 LDCM0264  AC144 HCT 116 C161(0.98); C173(0.98)  LDD0581  [4]
 LDCM0265  AC145 HCT 116 C161(0.84); C173(0.84)  LDD0582  [4]
 LDCM0266  AC146 HCT 116 C161(0.84); C173(0.84)  LDD0583  [4]
 LDCM0267  AC147 HCT 116 C161(0.94); C173(0.94)  LDD0584  [4]
 LDCM0268  AC148 HCT 116 C161(0.96); C173(0.96)  LDD0585  [4]
 LDCM0269  AC149 HCT 116 C161(0.90); C173(0.90)  LDD0586  [4]
 LDCM0270  AC15 HCT 116 C161(1.00); C173(1.00); C621(1.19)  LDD0587  [4]
 LDCM0271  AC150 HCT 116 C161(0.88); C173(0.88)  LDD0588  [4]
 LDCM0272  AC151 HCT 116 C161(0.98); C173(0.98)  LDD0589  [4]
 LDCM0273  AC152 HCT 116 C161(1.00); C173(1.00)  LDD0590  [4]
 LDCM0274  AC153 HCT 116 C161(0.99); C173(0.99)  LDD0591  [4]
 LDCM0621  AC154 HCT 116 C161(0.90); C173(0.90)  LDD2158  [4]
 LDCM0622  AC155 HCT 116 C161(0.82); C173(0.82)  LDD2159  [4]
 LDCM0623  AC156 HCT 116 C161(0.88); C173(0.88)  LDD2160  [4]
 LDCM0624  AC157 HCT 116 C161(1.06); C173(1.06)  LDD2161  [4]
 LDCM0276  AC17 HCT 116 C161(0.51); C173(0.51); C621(1.04)  LDD0593  [4]
 LDCM0277  AC18 HCT 116 C161(0.63); C173(0.63); C621(0.94)  LDD0594  [4]
 LDCM0278  AC19 HCT 116 C161(0.47); C173(0.47); C621(1.13)  LDD0595  [4]
 LDCM0279  AC2 HCT 116 C161(0.78); C173(0.78)  LDD0596  [4]
 LDCM0280  AC20 HCT 116 C161(0.60); C173(0.60); C621(1.14)  LDD0597  [4]
 LDCM0281  AC21 HCT 116 C161(0.52); C173(0.52); C621(1.29)  LDD0598  [4]
 LDCM0282  AC22 HCT 116 C161(0.48); C173(0.48); C621(1.18)  LDD0599  [4]
 LDCM0283  AC23 HCT 116 C161(0.44); C173(0.44); C621(1.08)  LDD0600  [4]
 LDCM0284  AC24 HCT 116 C161(0.49); C173(0.49); C621(1.08)  LDD0601  [4]
 LDCM0285  AC25 HCT 116 C621(1.03)  LDD0602  [4]
 LDCM0286  AC26 HCT 116 C621(1.19)  LDD0603  [4]
 LDCM0287  AC27 HCT 116 C621(1.25)  LDD0604  [4]
 LDCM0288  AC28 HCT 116 C621(1.27)  LDD0605  [4]
 LDCM0289  AC29 HCT 116 C621(1.23)  LDD0606  [4]
 LDCM0290  AC3 HCT 116 C161(0.82); C173(0.82)  LDD0607  [4]
 LDCM0291  AC30 HCT 116 C621(1.19)  LDD0608  [4]
 LDCM0292  AC31 HCT 116 C621(1.20)  LDD0609  [4]
 LDCM0293  AC32 HCT 116 C621(1.31)  LDD0610  [4]
 LDCM0294  AC33 HCT 116 C621(1.31)  LDD0611  [4]
 LDCM0295  AC34 HCT 116 C621(1.29)  LDD0612  [4]
 LDCM0296  AC35 HCT 116 C621(0.78); C173(0.88); C161(0.88)  LDD0613  [4]
 LDCM0297  AC36 HCT 116 C621(1.01); C173(1.13); C161(1.23)  LDD0614  [4]
 LDCM0298  AC37 HCT 116 C161(0.89); C621(0.93); C173(0.97)  LDD0615  [4]
 LDCM0299  AC38 HCT 116 C173(0.82); C161(0.83); C621(0.91)  LDD0616  [4]
 LDCM0300  AC39 HCT 116 C173(0.77); C161(0.79); C621(1.11)  LDD0617  [4]
 LDCM0301  AC4 HCT 116 C161(0.85); C173(0.85)  LDD0618  [4]
 LDCM0302  AC40 HCT 116 C161(0.92); C173(0.93); C621(1.11)  LDD0619  [4]
 LDCM0303  AC41 HCT 116 C161(0.63); C173(0.76); C621(1.12)  LDD0620  [4]
 LDCM0304  AC42 HCT 116 C161(0.92); C173(1.12); C621(1.13)  LDD0621  [4]
 LDCM0305  AC43 HCT 116 C161(0.81); C173(0.87); C621(1.26)  LDD0622  [4]
 LDCM0306  AC44 HCT 116 C161(0.87); C173(0.89); C621(1.12)  LDD0623  [4]
 LDCM0307  AC45 HCT 116 C173(0.92); C161(0.94); C621(1.17)  LDD0624  [4]
 LDCM0308  AC46 HCT 116 C161(0.83); C173(0.83)  LDD0625  [4]
 LDCM0309  AC47 HCT 116 C161(0.88); C173(0.88)  LDD0626  [4]
 LDCM0310  AC48 HCT 116 C161(0.57); C173(0.57)  LDD0627  [4]
 LDCM0311  AC49 HCT 116 C161(0.99); C173(0.99)  LDD0628  [4]
 LDCM0312  AC5 HCT 116 C161(0.68); C173(0.68)  LDD0629  [4]
 LDCM0313  AC50 HCT 116 C161(1.13); C173(1.13)  LDD0630  [4]
 LDCM0314  AC51 HCT 116 C161(0.75); C173(0.75)  LDD0631  [4]
 LDCM0315  AC52 HCT 116 C161(0.91); C173(0.91)  LDD0632  [4]
 LDCM0316  AC53 HCT 116 C161(0.77); C173(0.77)  LDD0633  [4]
 LDCM0317  AC54 HCT 116 C161(1.14); C173(1.14)  LDD0634  [4]
 LDCM0318  AC55 HCT 116 C161(1.09); C173(1.09)  LDD0635  [4]
 LDCM0319  AC56 HCT 116 C161(1.71); C173(1.71)  LDD0636  [4]
 LDCM0320  AC57 HCT 116 C161(0.86); C173(0.86)  LDD0637  [4]
 LDCM0321  AC58 HCT 116 C161(0.86); C173(0.86)  LDD0638  [4]
 LDCM0322  AC59 HCT 116 C161(0.84); C173(0.84)  LDD0639  [4]
 LDCM0323  AC6 HCT 116 C621(1.00); C161(1.03); C173(1.03)  LDD0640  [4]
 LDCM0324  AC60 HCT 116 C161(0.83); C173(0.83)  LDD0641  [4]
 LDCM0325  AC61 HCT 116 C161(0.80); C173(0.80)  LDD0642  [4]
 LDCM0326  AC62 HCT 116 C161(0.90); C173(0.90)  LDD0643  [4]
 LDCM0327  AC63 HCT 116 C161(0.80); C173(0.80)  LDD0644  [4]
 LDCM0328  AC64 HCT 116 C161(0.81); C173(0.81)  LDD0645  [4]
 LDCM0329  AC65 HCT 116 C161(0.60); C173(0.60)  LDD0646  [4]
 LDCM0330  AC66 HCT 116 C161(0.60); C173(0.60)  LDD0647  [4]
 LDCM0331  AC67 HCT 116 C161(0.68); C173(0.68)  LDD0648  [4]
 LDCM0332  AC68 HCT 116 C161(1.30); C173(1.30)  LDD0649  [4]
 LDCM0333  AC69 HCT 116 C161(1.24); C173(1.24)  LDD0650  [4]
 LDCM0334  AC7 HCT 116 C161(0.99); C173(0.99); C621(1.02)  LDD0651  [4]
 LDCM0335  AC70 HCT 116 C161(1.19); C173(1.19)  LDD0652  [4]
 LDCM0336  AC71 HCT 116 C161(1.04); C173(1.04)  LDD0653  [4]
 LDCM0337  AC72 HCT 116 C161(1.11); C173(1.11)  LDD0654  [4]
 LDCM0338  AC73 HCT 116 C161(1.24); C173(1.24)  LDD0655  [4]
 LDCM0339  AC74 HCT 116 C161(1.12); C173(1.12)  LDD0656  [4]
 LDCM0340  AC75 HCT 116 C161(1.44); C173(1.44)  LDD0657  [4]
 LDCM0341  AC76 HCT 116 C161(1.00); C173(1.00)  LDD0658  [4]
 LDCM0342  AC77 HCT 116 C161(1.27); C173(1.27)  LDD0659  [4]
 LDCM0343  AC78 HCT 116 C161(1.19); C173(1.19)  LDD0660  [4]
 LDCM0344  AC79 HCT 116 C161(1.17); C173(1.17)  LDD0661  [4]
 LDCM0345  AC8 HCT 116 C161(0.97); C173(0.97); C621(1.03)  LDD0662  [4]
 LDCM0346  AC80 HCT 116 C161(1.07); C173(1.07)  LDD0663  [4]
 LDCM0347  AC81 HCT 116 C161(1.16); C173(1.16)  LDD0664  [4]
 LDCM0348  AC82 HCT 116 C161(1.17); C173(1.17)  LDD0665  [4]
 LDCM0349  AC83 HCT 116 C161(0.91); C173(0.91)  LDD0666  [4]
 LDCM0350  AC84 HCT 116 C161(0.85); C173(0.85)  LDD0667  [4]
 LDCM0351  AC85 HCT 116 C161(0.69); C173(0.69)  LDD0668  [4]
 LDCM0352  AC86 HCT 116 C161(0.76); C173(0.76)  LDD0669  [4]
 LDCM0353  AC87 HCT 116 C161(0.83); C173(0.83)  LDD0670  [4]
 LDCM0354  AC88 HCT 116 C161(0.94); C173(0.94)  LDD0671  [4]
 LDCM0355  AC89 HCT 116 C161(0.88); C173(0.88)  LDD0672  [4]
 LDCM0357  AC90 HCT 116 C161(0.69); C173(0.69)  LDD0674  [4]
 LDCM0358  AC91 HCT 116 C161(0.91); C173(0.91)  LDD0675  [4]
 LDCM0359  AC92 HCT 116 C161(1.02); C173(1.02)  LDD0676  [4]
 LDCM0360  AC93 HCT 116 C161(0.90); C173(0.90)  LDD0677  [4]
 LDCM0361  AC94 HCT 116 C161(0.83); C173(0.83)  LDD0678  [4]
 LDCM0362  AC95 HCT 116 C161(0.80); C173(0.80)  LDD0679  [4]
 LDCM0363  AC96 HCT 116 C161(0.78); C173(0.78)  LDD0680  [4]
 LDCM0364  AC97 HCT 116 C161(0.84); C173(0.84)  LDD0681  [4]
 LDCM0365  AC98 HCT 116 C161(0.86); C173(0.86)  LDD0682  [4]
 LDCM0366  AC99 HCT 116 C161(0.87); C173(0.87)  LDD0683  [4]
 LDCM0248  AKOS034007472 HCT 116 C161(0.89); C173(0.89); C621(0.97)  LDD0565  [4]
 LDCM0356  AKOS034007680 HCT 116 C621(0.94); C161(1.14); C173(1.14)  LDD0673  [4]
 LDCM0275  AKOS034007705 HCT 116 C161(0.94); C173(0.94); C621(1.43)  LDD0592  [4]
 LDCM0020  ARS-1620 HCC44 C359(1.00); C161(0.95); C173(0.86)  LDD0078  [4]
 LDCM0632  CL-Sc Hep-G2 C404(1.41); C181(1.12)  LDD2227  [6]
 LDCM0367  CL1 HCT 116 C161(1.15); C173(1.15); C621(1.19)  LDD0684  [4]
 LDCM0368  CL10 HCT 116 C621(0.98); C161(1.11); C173(1.11)  LDD0685  [4]
 LDCM0369  CL100 HCT 116 C161(0.84); C173(0.84)  LDD0686  [4]
 LDCM0370  CL101 HCT 116 C621(1.21); C161(1.28); C173(1.28)  LDD0687  [4]
 LDCM0371  CL102 HCT 116 C161(1.26); C173(1.26); C621(1.29)  LDD0688  [4]
 LDCM0372  CL103 HCT 116 C161(0.89); C173(0.89); C621(1.14)  LDD0689  [4]
 LDCM0373  CL104 HCT 116 C161(1.06); C173(1.06); C621(1.18)  LDD0690  [4]
 LDCM0374  CL105 HCT 116 C161(0.47); C173(0.47); C621(1.30)  LDD0691  [4]
 LDCM0375  CL106 HCT 116 C161(0.46); C173(0.46); C621(1.33)  LDD0692  [4]
 LDCM0376  CL107 HCT 116 C161(0.48); C173(0.48); C621(1.30)  LDD0693  [4]
 LDCM0377  CL108 HCT 116 C161(0.39); C173(0.39); C621(1.49)  LDD0694  [4]
 LDCM0378  CL109 HCT 116 C161(0.55); C173(0.55); C621(1.42)  LDD0695  [4]
 LDCM0379  CL11 HCT 116 C621(0.99); C161(1.28); C173(1.28)  LDD0696  [4]
 LDCM0380  CL110 HCT 116 C161(0.40); C173(0.40); C621(1.35)  LDD0697  [4]
 LDCM0381  CL111 HCT 116 C161(0.49); C173(0.49); C621(1.47)  LDD0698  [4]
 LDCM0382  CL112 HCT 116 C621(1.05)  LDD0699  [4]
 LDCM0383  CL113 HCT 116 C621(1.13)  LDD0700  [4]
 LDCM0384  CL114 HCT 116 C621(1.18)  LDD0701  [4]
 LDCM0385  CL115 HCT 116 C621(1.17)  LDD0702  [4]
 LDCM0386  CL116 HCT 116 C621(1.20)  LDD0703  [4]
 LDCM0387  CL117 HCT 116 C173(1.10); C161(1.29); C621(1.39)  LDD0704  [4]
 LDCM0388  CL118 HCT 116 C161(0.86); C173(0.89); C621(1.17)  LDD0705  [4]
 LDCM0389  CL119 HCT 116 C173(0.87); C161(0.91); C621(1.13)  LDD0706  [4]
 LDCM0390  CL12 HCT 116 C161(1.22); C173(1.22); C621(1.33)  LDD0707  [4]
 LDCM0391  CL120 HCT 116 C161(0.71); C173(0.77); C621(1.08)  LDD0708  [4]
 LDCM0392  CL121 HCT 116 C161(1.64); C173(1.64)  LDD0709  [4]
 LDCM0393  CL122 HCT 116 C161(0.74); C173(0.74)  LDD0710  [4]
 LDCM0394  CL123 HCT 116 C161(1.38); C173(1.38)  LDD0711  [4]
 LDCM0395  CL124 HCT 116 C161(0.94); C173(0.94)  LDD0712  [4]
 LDCM0396  CL125 HCT 116 C161(0.73); C173(0.73)  LDD0713  [4]
 LDCM0397  CL126 HCT 116 C161(0.92); C173(0.92)  LDD0714  [4]
 LDCM0398  CL127 HCT 116 C161(0.90); C173(0.90)  LDD0715  [4]
 LDCM0399  CL128 HCT 116 C161(0.84); C173(0.84)  LDD0716  [4]
 LDCM0400  CL13 HCT 116 C621(1.11); C161(1.42); C173(1.42)  LDD0717  [4]
 LDCM0401  CL14 HCT 116 C621(1.03); C161(1.43); C173(1.43)  LDD0718  [4]
 LDCM0402  CL15 HCT 116 C621(1.17); C161(1.29); C173(1.29)  LDD0719  [4]
 LDCM0403  CL16 HCT 116 C161(1.52); C173(1.52)  LDD0720  [4]
 LDCM0404  CL17 HCT 116 C173(1.18); C161(1.20)  LDD0721  [4]
 LDCM0405  CL18 HCT 116 C173(1.36); C161(1.39)  LDD0722  [4]
 LDCM0406  CL19 HCT 116 C161(1.10); C173(1.14)  LDD0723  [4]
 LDCM0407  CL2 HCT 116 C621(1.11); C161(1.19); C173(1.19)  LDD0724  [4]
 LDCM0408  CL20 HCT 116 C161(1.61); C173(1.64)  LDD0725  [4]
 LDCM0409  CL21 HCT 116 C161(1.46); C173(1.51)  LDD0726  [4]
 LDCM0410  CL22 HCT 116 C161(1.56); C173(1.57)  LDD0727  [4]
 LDCM0411  CL23 HCT 116 C173(1.55); C161(1.57)  LDD0728  [4]
 LDCM0412  CL24 HCT 116 C161(1.38); C173(1.39)  LDD0729  [4]
 LDCM0413  CL25 HCT 116 C161(1.53); C173(1.53)  LDD0730  [4]
 LDCM0414  CL26 HCT 116 C161(1.36); C173(1.38)  LDD0731  [4]
 LDCM0415  CL27 HCT 116 C161(1.30); C173(1.30)  LDD0732  [4]
 LDCM0416  CL28 HCT 116 C161(1.38); C173(1.41)  LDD0733  [4]
 LDCM0417  CL29 HCT 116 C161(1.34); C173(1.35)  LDD0734  [4]
 LDCM0418  CL3 HCT 116 C161(1.13); C173(1.13); C621(1.21)  LDD0735  [4]
 LDCM0419  CL30 HCT 116 C161(1.33); C173(1.34)  LDD0736  [4]
 LDCM0420  CL31 HCT 116 C161(0.96); C173(0.96)  LDD0737  [4]
 LDCM0421  CL32 HCT 116 C161(0.99); C173(0.99)  LDD0738  [4]
 LDCM0422  CL33 HCT 116 C161(1.24); C173(1.24)  LDD0739  [4]
 LDCM0423  CL34 HCT 116 C161(1.05); C173(1.05)  LDD0740  [4]
 LDCM0424  CL35 HCT 116 C161(1.01); C173(1.01)  LDD0741  [4]
 LDCM0425  CL36 HCT 116 C161(0.95); C173(0.95)  LDD0742  [4]
 LDCM0426  CL37 HCT 116 C161(1.06); C173(1.06)  LDD0743  [4]
 LDCM0428  CL39 HCT 116 C161(1.21); C173(1.21)  LDD0745  [4]
 LDCM0429  CL4 HCT 116 C161(1.25); C173(1.25); C621(1.03)  LDD0746  [4]
 LDCM0430  CL40 HCT 116 C161(1.12); C173(1.12)  LDD0747  [4]
 LDCM0431  CL41 HCT 116 C161(0.99); C173(0.99)  LDD0748  [4]
 LDCM0432  CL42 HCT 116 C161(1.17); C173(1.17)  LDD0749  [4]
 LDCM0433  CL43 HCT 116 C161(1.40); C173(1.40)  LDD0750  [4]
 LDCM0434  CL44 HCT 116 C161(0.98); C173(0.98)  LDD0751  [4]
 LDCM0435  CL45 HCT 116 C161(1.08); C173(1.08)  LDD0752  [4]
 LDCM0436  CL46 HCT 116 C161(0.88); C173(0.88); C621(1.12)  LDD0753  [4]
 LDCM0437  CL47 HCT 116 C161(0.87); C173(0.87); C621(0.82)  LDD0754  [4]
 LDCM0438  CL48 HCT 116 C161(1.16); C173(1.16); C621(0.98)  LDD0755  [4]
 LDCM0439  CL49 HCT 116 C161(1.06); C173(1.06); C621(1.29)  LDD0756  [4]
 LDCM0440  CL5 HCT 116 C161(1.18); C173(1.18); C621(1.07)  LDD0757  [4]
 LDCM0441  CL50 HCT 116 C161(0.86); C173(0.86); C621(1.07)  LDD0758  [4]
 LDCM0442  CL51 HCT 116 C161(0.91); C173(0.91); C621(1.25)  LDD0759  [4]
 LDCM0443  CL52 HCT 116 C161(0.97); C173(0.97); C621(1.16)  LDD0760  [4]
 LDCM0444  CL53 HCT 116 C161(1.09); C173(1.09); C621(0.71)  LDD0761  [4]
 LDCM0445  CL54 HCT 116 C161(1.07); C173(1.07); C621(0.99)  LDD0762  [4]
 LDCM0446  CL55 HCT 116 C161(1.07); C173(1.07); C621(1.01)  LDD0763  [4]
 LDCM0447  CL56 HCT 116 C161(0.94); C173(0.94); C621(0.95)  LDD0764  [4]
 LDCM0448  CL57 HCT 116 C161(0.94); C173(0.94); C621(0.92)  LDD0765  [4]
 LDCM0449  CL58 HCT 116 C161(1.02); C173(1.02); C621(1.26)  LDD0766  [4]
 LDCM0450  CL59 HCT 116 C161(1.21); C173(1.21); C621(1.10)  LDD0767  [4]
 LDCM0451  CL6 HCT 116 C161(0.98); C173(0.98); C621(1.15)  LDD0768  [4]
 LDCM0452  CL60 HCT 116 C161(0.97); C173(0.97); C621(1.27)  LDD0769  [4]
 LDCM0453  CL61 HCT 116 C161(0.92); C173(0.92)  LDD0770  [4]
 LDCM0454  CL62 HCT 116 C161(1.05); C173(1.05)  LDD0771  [4]
 LDCM0455  CL63 HCT 116 C161(0.90); C173(0.90)  LDD0772  [4]
 LDCM0456  CL64 HCT 116 C161(1.04); C173(1.04)  LDD0773  [4]
 LDCM0457  CL65 HCT 116 C161(0.86); C173(0.86)  LDD0774  [4]
 LDCM0458  CL66 HCT 116 C161(1.04); C173(1.04)  LDD0775  [4]
 LDCM0459  CL67 HCT 116 C161(1.31); C173(1.31)  LDD0776  [4]
 LDCM0460  CL68 HCT 116 C161(1.15); C173(1.15)  LDD0777  [4]
 LDCM0461  CL69 HCT 116 C161(1.13); C173(1.13)  LDD0778  [4]
 LDCM0462  CL7 HCT 116 C161(1.40); C173(1.40); C621(1.17)  LDD0779  [4]
 LDCM0463  CL70 HCT 116 C161(1.06); C173(1.06)  LDD0780  [4]
 LDCM0464  CL71 HCT 116 C161(1.09); C173(1.09)  LDD0781  [4]
 LDCM0465  CL72 HCT 116 C161(0.95); C173(0.95)  LDD0782  [4]
 LDCM0466  CL73 HCT 116 C161(1.23); C173(1.23)  LDD0783  [4]
 LDCM0467  CL74 HCT 116 C161(1.03); C173(1.03)  LDD0784  [4]
 LDCM0469  CL76 HCT 116 C161(0.83); C173(0.83)  LDD0786  [4]
 LDCM0470  CL77 HCT 116 C161(0.76); C173(0.76)  LDD0787  [4]
 LDCM0471  CL78 HCT 116 C161(0.84); C173(0.84)  LDD0788  [4]
 LDCM0472  CL79 HCT 116 C161(0.96); C173(0.96)  LDD0789  [4]
 LDCM0473  CL8 HCT 116 C161(1.51); C173(1.51); C621(1.18)  LDD0790  [4]
 LDCM0474  CL80 HCT 116 C161(0.94); C173(0.94)  LDD0791  [4]
 LDCM0475  CL81 HCT 116 C161(0.83); C173(0.83)  LDD0792  [4]
 LDCM0476  CL82 HCT 116 C161(0.82); C173(0.82)  LDD0793  [4]
 LDCM0477  CL83 HCT 116 C161(0.86); C173(0.86)  LDD0794  [4]
 LDCM0478  CL84 HCT 116 C161(0.78); C173(0.78)  LDD0795  [4]
 LDCM0479  CL85 HCT 116 C161(0.73); C173(0.73)  LDD0796  [4]
 LDCM0480  CL86 HCT 116 C161(0.61); C173(0.61)  LDD0797  [4]
 LDCM0481  CL87 HCT 116 C161(0.74); C173(0.74)  LDD0798  [4]
 LDCM0482  CL88 HCT 116 C161(0.69); C173(0.69)  LDD0799  [4]
 LDCM0483  CL89 HCT 116 C161(0.90); C173(0.90)  LDD0800  [4]
 LDCM0484  CL9 HCT 116 C161(1.07); C173(1.07); C621(1.21)  LDD0801  [4]
 LDCM0485  CL90 HCT 116 C161(0.76); C173(0.76)  LDD0802  [4]
 LDCM0486  CL91 HCT 116 C161(1.18); C173(1.18)  LDD0803  [4]
 LDCM0487  CL92 HCT 116 C161(0.92); C173(0.92)  LDD0804  [4]
 LDCM0488  CL93 HCT 116 C161(0.96); C173(0.96)  LDD0805  [4]
 LDCM0489  CL94 HCT 116 C161(1.21); C173(1.21)  LDD0806  [4]
 LDCM0490  CL95 HCT 116 C161(0.92); C173(0.92)  LDD0807  [4]
 LDCM0491  CL96 HCT 116 C161(1.05); C173(1.05)  LDD0808  [4]
 LDCM0492  CL97 HCT 116 C161(0.84); C173(0.84)  LDD0809  [4]
 LDCM0493  CL98 HCT 116 C161(0.90); C173(0.90)  LDD0810  [4]
 LDCM0494  CL99 HCT 116 C161(0.94); C173(0.94)  LDD0811  [4]
 LDCM0495  E2913 HEK-293T C404(0.99); C181(1.19); C19(1.00); C23(0.85)  LDD1698  [12]
 LDCM0468  Fragment33 HCT 116 C161(1.01); C173(1.01)  LDD0785  [4]
 LDCM0427  Fragment51 HCT 116 C161(1.42); C173(1.42)  LDD0744  [4]
 LDCM0179  JZ128 PC-3 N.A.  LDD0462  [3]
 LDCM0022  KB02 HCT 116 C161(1.36); C173(1.36)  LDD0080  [4]
 LDCM0023  KB03 HCT 116 C161(1.25); C173(1.25)  LDD0081  [4]
 LDCM0024  KB05 HCT 116 C161(1.33); C173(1.33)  LDD0082  [4]
 LDCM0021  THZ1 HCT 116 C161(1.41); C173(1.41)  LDD2173  [4]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 5 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Epidermal growth factor receptor (EGFR) Tyr protein kinase family P00533
Ras-related protein Rab-21 (RAB21) Rab family Q9UL25
Thioredoxin, mitochondrial (TXN2) Thioredoxin family Q99757
E3 ubiquitin-protein ligase TRIM15 (TRIM15) TRIM/RBCC family Q9C019
Tripartite motif-containing protein 54 (TRIM54) . Q9BYV2
Transporter and channel
Click To Hide/Show 5 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Arrestin domain-containing protein 3 (ARRDC3) Arrestin family Q96B67
Hsp90 co-chaperone Cdc37 (CDC37) CDC37 family Q16543
SNARE-associated protein Snapin (SNAPIN) SNAPIN family O95295
Alpha-synuclein (SNCA) Synuclein family P37840
THO complex subunit 1 (THOC1) . Q96FV9
Transcription factor
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
G-protein coupled receptor-associated sorting protein 2 (GPRASP2) GPRASP family Q96D09
Other
Click To Hide/Show 19 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Biogenesis of lysosome-related organelles complex 1 subunit 6 (BLOC1S6) BLOC1S6 family Q9UL45
Dynactin subunit 2 (DCTN2) Dynactin subunit 2 family Q13561
KxDL motif-containing protein 1 (KXD1) KXD1 family Q9BQD3
Protein Mis18-beta (OIP5) Mis18 family O43482
Rab GTPase-binding effector protein 1 (RABEP1) Rabaptin family Q15276
UV excision repair protein RAD23 homolog A (RAD23A) RAD23 family P54725
SEC14 domain and spectrin repeat-containing protein 1 (SESTD1) SOLO family Q86VW0
Protein SSX3 (SSX3) SSX family Q99909
Trichoplein keratin filament-binding protein (TCHP) TCHP family Q9BT92
Polyubiquitin-B (UBB) Ubiquitin family P0CG47
Ubiquitin-ribosomal protein eL40 fusion protein (UBA52) Ubiquitin family; Eukaryotic ribosomal protein eL40 family P62987
Zinc finger C2HC domain-containing protein 1C (ZC2HC1C) ZC2HC1 family Q53FD0
Ankyrin repeat domain-containing protein 29 (ANKRD29) . Q8N6D5
CLOCK-interacting pacemaker (CIPC) . Q9C0C6
DAZ-associated protein 2 (DAZAP2) . Q15038
Interactor of HORMAD1 protein 1 (IHO1) . Q8IYA8
RAS protein activator like-3 (RASAL3) . Q86YV0
RING finger protein 11 (RNF11) . Q9Y3C5
Spartin (SPART) . Q8N0X7

References

1 Quantitative and Site-Specific Chemoproteomic Profiling of Targets of Acrolein. Chem Res Toxicol. 2019 Mar 18;32(3):467-473. doi: 10.1021/acs.chemrestox.8b00343. Epub 2019 Jan 15.
2 An Azo Coupling-Based Chemoproteomic Approach to Systematically Profile the Tyrosine Reactivity in the Human Proteome. Anal Chem. 2021 Jul 27;93(29):10334-10342. doi: 10.1021/acs.analchem.1c01935. Epub 2021 Jul 12.
3 A Chemoproteomic Strategy for Direct and Proteome-Wide Covalent Inhibitor Target-Site Identification. J Am Chem Soc. 2019 Jan 9;141(1):191-203. doi: 10.1021/jacs.8b07911. Epub 2018 Dec 20.
4 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
5 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
6 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
7 Benchmarking Cleavable Biotin Tags for Peptide-Centric Chemoproteomics. J Proteome Res. 2022 May 6;21(5):1349-1358. doi: 10.1021/acs.jproteome.2c00174. Epub 2022 Apr 25.
Mass spectrometry data entry: PXD031019
8 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
9 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
10 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587
11 Chemoproteomic capture of RNA binding activity in living cells. Nat Commun. 2023 Oct 7;14(1):6282. doi: 10.1038/s41467-023-41844-z.
Mass spectrometry data entry: PXD044625
12 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402