General Information of Target

Target ID LDTP13639
Target Name Vacuolar protein sorting-associated protein 4A (VPS4A)
Gene Name VPS4A
Gene ID 27183
Synonyms
VPS4; Vacuolar protein sorting-associated protein 4A; EC 3.6.4.6; Protein SKD2; VPS4-1; hVPS4
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKP
KRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPS
LDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMD
WAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNR
RDLNFERGGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQP
GKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSS
GPPGHTMEVSC
Target Bioclass
Enzyme
Family
AAA ATPase family
Subcellular location
Late endosome membrane
Function
Involved in late steps of the endosomal multivesicular bodies (MVB) pathway. Recognizes membrane-associated ESCRT-III assemblies and catalyzes their disassembly, possibly in combination with membrane fission. Redistributes the ESCRT-III components to the cytoplasm for further rounds of MVB sorting. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. It is required for proper accomplishment of various processes including the regulation of endosome size, primary cilium organization, mitotic spindle organization, chromosome segregation, and nuclear envelope sealing and spindle disassembly during anaphase. Involved in cytokinesis: retained at the midbody by ZFYVE19/ANCHR and CHMP4C until abscission checkpoint signaling is terminated at late cytokinesis. It is then released following dephosphorylation of CHMP4C, leading to abscission. VPS4A/B are required for the exosomal release of SDCBP, CD63 and syndecan. Critical for normal erythroblast cytokinesis and correct erythropoiesis.; (Microbial infection) In conjunction with the ESCRT machinery also appears to function in topologically equivalent membrane fission events, such as the terminal stages of cytokinesis and enveloped virus budding (HIV-1 and other lentiviruses).
Uniprot ID
Q9UN37
Ensemble ID
ENST00000254950.13
HGNC ID
HGNC:13488

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 23 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info 
15.00  LDD0402  [1]
C-Sul
 Probe Info 
13.22  LDD0066  [2]
TH211
 Probe Info 
Y45(19.53); Y290(8.37)  LDD0257  [3]
STPyne
 Probe Info 
K210(0.93); K59(1.91)  LDD0277  [4]
Probe 1
 Probe Info 
Y25(18.03); Y45(61.99)  LDD3495  [5]
BTD
 Probe Info 
C60(2.74)  LDD1700  [6]
HHS-475
 Probe Info 
Y45(0.97)  LDD0264  [7]
HHS-465
 Probe Info 
Y45(9.08)  LDD2237  [8]
DBIA
 Probe Info 
C403(1.58)  LDD0080  [9]
ATP probe
 Probe Info 
N.A.  LDD0199  [10]
4-Iodoacetamidophenylacetylene
 Probe Info 
C60(0.00); C233(0.00); C377(0.00); C403(0.00)  LDD0038  [11]
IA-alkyne
 Probe Info 
C60(0.00); C403(0.00); C233(0.00); C359(0.00)  LDD0036  [11]
Lodoacetamide azide
 Probe Info 
C60(0.00); C403(0.00); C233(0.00); C377(0.00)  LDD0037  [11]
WYneN
 Probe Info 
N.A.  LDD0021  [12]
IPM
 Probe Info 
N.A.  LDD0005  [12]
SF
 Probe Info 
N.A.  LDD0028  [13]
TFBX
 Probe Info 
N.A.  LDD0148  [14]
Phosphinate-6
 Probe Info 
N.A.  LDD0018  [15]
Acrolein
 Probe Info 
N.A.  LDD0217  [16]
W1
 Probe Info 
N.A.  LDD0236  [17]
AOyne
 Probe Info 
14.90  LDD0443  [18]
NAIA_5
 Probe Info 
N.A.  LDD2223  [19]
HHS-482
 Probe Info 
Y45(1.55)  LDD2239  [8]
PAL-AfBPP Probe
Click To Hide/Show 2 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
FFF probe13
 Probe Info 
8.72  LDD0476  [20]
VE-P
 Probe Info 
N.A.  LDD0396  [21]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0502  1-(Cyanoacetyl)piperidine MDA-MB-231 C359(1.16)  LDD2095  [6]
 LDCM0524  2-Cyano-N-(2-morpholin-4-yl-ethyl)-acetamide MDA-MB-231 C359(0.83); C403(0.79)  LDD2117  [6]
 LDCM0558  2-Cyano-N-phenylacetamide MDA-MB-231 C359(1.14); C60(1.37)  LDD2152  [6]
 LDCM0214  AC1 HCT 116 C233(1.07)  LDD0531  [9]
 LDCM0215  AC10 HEK-293T C233(1.31); C403(1.08)  LDD0813  [9]
 LDCM0216  AC100 HCT 116 C233(0.60); C403(1.01)  LDD0533  [9]
 LDCM0217  AC101 HCT 116 C233(0.84); C403(0.89)  LDD0534  [9]
 LDCM0218  AC102 HCT 116 C233(0.63); C403(0.98)  LDD0535  [9]
 LDCM0219  AC103 HCT 116 C233(0.69); C403(1.04)  LDD0536  [9]
 LDCM0220  AC104 HCT 116 C233(0.56); C403(1.02)  LDD0537  [9]
 LDCM0221  AC105 HCT 116 C233(0.81); C403(1.08)  LDD0538  [9]
 LDCM0222  AC106 HCT 116 C233(0.70); C403(0.97)  LDD0539  [9]
 LDCM0223  AC107 HCT 116 C233(0.70); C403(1.18)  LDD0540  [9]
 LDCM0224  AC108 HCT 116 C233(1.17); C403(0.74)  LDD0541  [9]
 LDCM0225  AC109 HCT 116 C233(0.99); C403(0.78)  LDD0542  [9]
 LDCM0226  AC11 HEK-293T C233(1.10); C403(1.02)  LDD0824  [9]
 LDCM0227  AC110 HCT 116 C233(0.62); C403(0.77)  LDD0544  [9]
 LDCM0228  AC111 HCT 116 C233(0.81); C403(0.87)  LDD0545  [9]
 LDCM0229  AC112 HCT 116 C233(0.49); C403(1.00)  LDD0546  [9]
 LDCM0230  AC113 HCT 116 C233(1.13); C403(0.99)  LDD0547  [9]
 LDCM0231  AC114 HCT 116 C233(0.88); C403(0.97)  LDD0548  [9]
 LDCM0232  AC115 HCT 116 C233(0.83); C403(1.02)  LDD0549  [9]
 LDCM0233  AC116 HCT 116 C233(0.97); C403(1.19)  LDD0550  [9]
 LDCM0234  AC117 HCT 116 C233(0.97); C403(0.89)  LDD0551  [9]
 LDCM0235  AC118 HCT 116 C233(1.25); C403(0.97)  LDD0552  [9]
 LDCM0236  AC119 HCT 116 C233(1.33); C403(1.06)  LDD0553  [9]
 LDCM0237  AC12 HEK-293T C233(1.18); C403(0.92)  LDD0835  [9]
 LDCM0238  AC120 HCT 116 C233(0.83); C403(1.12)  LDD0555  [9]
 LDCM0239  AC121 HCT 116 C233(1.20); C403(0.93)  LDD0556  [9]
 LDCM0240  AC122 HCT 116 C233(1.12); C403(1.15)  LDD0557  [9]
 LDCM0241  AC123 HCT 116 C233(0.84); C403(0.88)  LDD0558  [9]
 LDCM0242  AC124 HCT 116 C233(0.81); C403(1.00)  LDD0559  [9]
 LDCM0243  AC125 HCT 116 C233(1.45); C403(1.14)  LDD0560  [9]
 LDCM0244  AC126 HCT 116 C233(1.03); C403(1.08)  LDD0561  [9]
 LDCM0245  AC127 HCT 116 C233(1.01); C403(1.03)  LDD0562  [9]
 LDCM0246  AC128 HCT 116 C233(1.26)  LDD0563  [9]
 LDCM0247  AC129 HCT 116 C233(4.71)  LDD0564  [9]
 LDCM0249  AC130 HCT 116 C233(1.29)  LDD0566  [9]
 LDCM0250  AC131 HCT 116 C233(1.13)  LDD0567  [9]
 LDCM0251  AC132 HCT 116 C233(1.34)  LDD0568  [9]
 LDCM0252  AC133 HCT 116 C233(1.43)  LDD0569  [9]
 LDCM0253  AC134 HCT 116 C233(1.28)  LDD0570  [9]
 LDCM0254  AC135 HCT 116 C233(1.91)  LDD0571  [9]
 LDCM0255  AC136 HCT 116 C233(1.14)  LDD0572  [9]
 LDCM0256  AC137 HCT 116 C233(0.94)  LDD0573  [9]
 LDCM0257  AC138 HCT 116 C233(1.44)  LDD0574  [9]
 LDCM0258  AC139 HCT 116 C233(1.68)  LDD0575  [9]
 LDCM0259  AC14 HEK-293T C233(1.31); C403(1.16)  LDD0857  [9]
 LDCM0260  AC140 HCT 116 C233(1.06)  LDD0577  [9]
 LDCM0261  AC141 HCT 116 C233(1.33)  LDD0578  [9]
 LDCM0262  AC142 HCT 116 C233(1.25)  LDD0579  [9]
 LDCM0263  AC143 HCT 116 C403(1.08)  LDD0580  [9]
 LDCM0264  AC144 HCT 116 C403(0.97)  LDD0581  [9]
 LDCM0265  AC145 HCT 116 C403(1.01)  LDD0582  [9]
 LDCM0266  AC146 HCT 116 C403(1.04)  LDD0583  [9]
 LDCM0267  AC147 HCT 116 C403(1.03)  LDD0584  [9]
 LDCM0268  AC148 HCT 116 C403(0.95)  LDD0585  [9]
 LDCM0269  AC149 HCT 116 C403(1.10)  LDD0586  [9]
 LDCM0270  AC15 HEK-293T C233(1.30); C403(1.12)  LDD0868  [9]
 LDCM0271  AC150 HCT 116 C403(1.11)  LDD0588  [9]
 LDCM0272  AC151 HCT 116 C403(0.99)  LDD0589  [9]
 LDCM0273  AC152 HCT 116 C403(0.99)  LDD0590  [9]
 LDCM0274  AC153 HCT 116 C403(0.97)  LDD0591  [9]
 LDCM0621  AC154 HCT 116 C403(1.02)  LDD2158  [9]
 LDCM0622  AC155 HCT 116 C403(0.95)  LDD2159  [9]
 LDCM0623  AC156 HCT 116 C403(1.11)  LDD2160  [9]
 LDCM0624  AC157 HCT 116 C403(0.93)  LDD2161  [9]
 LDCM0276  AC17 HCT 116 C233(0.80)  LDD0593  [9]
 LDCM0277  AC18 HCT 116 C233(0.60)  LDD0594  [9]
 LDCM0278  AC19 HCT 116 C233(0.89)  LDD0595  [9]
 LDCM0279  AC2 HCT 116 C233(0.96)  LDD0596  [9]
 LDCM0280  AC20 HCT 116 C233(0.93)  LDD0597  [9]
 LDCM0281  AC21 HCT 116 C233(0.76)  LDD0598  [9]
 LDCM0282  AC22 HCT 116 C233(0.86)  LDD0599  [9]
 LDCM0283  AC23 HCT 116 C233(0.78)  LDD0600  [9]
 LDCM0284  AC24 HCT 116 C233(0.89)  LDD0601  [9]
 LDCM0285  AC25 HEK-293T C403(1.03); C233(1.11); C359(1.50); C60(0.93)  LDD1524  [22]
 LDCM0286  AC26 HEK-293T C403(1.01); C233(0.82); C377(1.39); C359(1.45)  LDD1525  [22]
 LDCM0287  AC27 HEK-293T C403(0.94); C233(0.98); C359(1.44)  LDD1526  [22]
 LDCM0288  AC28 HEK-293T C403(1.05); C233(1.02); C359(1.30)  LDD1527  [22]
 LDCM0289  AC29 HEK-293T C403(0.94); C233(0.96); C377(0.67); C359(1.25)  LDD1528  [22]
 LDCM0290  AC3 HCT 116 C233(1.04)  LDD0607  [9]
 LDCM0291  AC30 HEK-293T C403(0.95); C233(0.99); C377(1.24); C359(1.39)  LDD1530  [22]
 LDCM0292  AC31 HEK-293T C403(0.99); C233(1.05); C359(1.46)  LDD1531  [22]
 LDCM0293  AC32 HEK-293T C403(0.96); C233(0.98)  LDD1532  [22]
 LDCM0294  AC33 HEK-293T C403(1.05); C233(0.98); C359(1.56); C60(0.96)  LDD1533  [22]
 LDCM0295  AC34 HEK-293T C403(0.98); C233(0.90); C377(1.16); C359(1.65)  LDD1534  [22]
 LDCM0296  AC35 HCT 116 C233(0.94); C403(0.95)  LDD0613  [9]
 LDCM0297  AC36 HCT 116 C403(0.96); C233(1.13)  LDD0614  [9]
 LDCM0298  AC37 HCT 116 C233(0.88); C403(0.97)  LDD0615  [9]
 LDCM0299  AC38 HCT 116 C403(1.01); C233(1.62)  LDD0616  [9]
 LDCM0300  AC39 HCT 116 C233(0.89); C403(0.90)  LDD0617  [9]
 LDCM0301  AC4 HCT 116 C233(1.26)  LDD0618  [9]
 LDCM0302  AC40 HCT 116 C403(0.89); C233(1.21)  LDD0619  [9]
 LDCM0303  AC41 HCT 116 C403(0.86); C233(0.88)  LDD0620  [9]
 LDCM0304  AC42 HCT 116 C403(0.98); C233(1.09)  LDD0621  [9]
 LDCM0305  AC43 HCT 116 C403(0.98); C233(1.20)  LDD0622  [9]
 LDCM0306  AC44 HCT 116 C403(0.87); C233(1.06)  LDD0623  [9]
 LDCM0307  AC45 HCT 116 C403(0.98); C233(1.30)  LDD0624  [9]
 LDCM0308  AC46 HCT 116 C233(1.01)  LDD0625  [9]
 LDCM0309  AC47 HCT 116 C233(0.86)  LDD0626  [9]
 LDCM0310  AC48 HCT 116 C233(1.60)  LDD0627  [9]
 LDCM0311  AC49 HCT 116 C233(1.04)  LDD0628  [9]
 LDCM0312  AC5 HCT 116 C233(1.24)  LDD0629  [9]
 LDCM0313  AC50 HCT 116 C233(1.00)  LDD0630  [9]
 LDCM0314  AC51 HCT 116 C233(1.22)  LDD0631  [9]
 LDCM0315  AC52 HCT 116 C233(1.07)  LDD0632  [9]
 LDCM0316  AC53 HCT 116 C233(1.04)  LDD0633  [9]
 LDCM0317  AC54 HCT 116 C233(0.90)  LDD0634  [9]
 LDCM0318  AC55 HCT 116 C233(1.39)  LDD0635  [9]
 LDCM0319  AC56 HCT 116 C233(1.63)  LDD0636  [9]
 LDCM0320  AC57 HCT 116 C233(1.41)  LDD0637  [9]
 LDCM0321  AC58 HCT 116 C233(0.92)  LDD0638  [9]
 LDCM0322  AC59 HCT 116 C233(0.98)  LDD0639  [9]
 LDCM0323  AC6 HEK-293T C233(0.94); C403(1.20)  LDD0921  [9]
 LDCM0324  AC60 HCT 116 C233(1.02)  LDD0641  [9]
 LDCM0325  AC61 HCT 116 C233(1.57)  LDD0642  [9]
 LDCM0326  AC62 HCT 116 C233(1.62)  LDD0643  [9]
 LDCM0327  AC63 HCT 116 C233(1.03)  LDD0644  [9]
 LDCM0328  AC64 HCT 116 C233(0.89)  LDD0645  [9]
 LDCM0329  AC65 HCT 116 C233(1.70)  LDD0646  [9]
 LDCM0330  AC66 HCT 116 C233(1.47)  LDD0647  [9]
 LDCM0331  AC67 HCT 116 C233(1.36)  LDD0648  [9]
 LDCM0332  AC68 HCT 116 C233(0.71)  LDD0649  [9]
 LDCM0333  AC69 HCT 116 C233(0.60)  LDD0650  [9]
 LDCM0334  AC7 HEK-293T C233(1.04); C403(0.96)  LDD0932  [9]
 LDCM0335  AC70 HCT 116 C233(0.48)  LDD0652  [9]
 LDCM0336  AC71 HCT 116 C233(0.69)  LDD0653  [9]
 LDCM0337  AC72 HCT 116 C233(0.52)  LDD0654  [9]
 LDCM0338  AC73 HCT 116 C233(0.70)  LDD0655  [9]
 LDCM0339  AC74 HCT 116 C233(0.94)  LDD0656  [9]
 LDCM0340  AC75 HCT 116 C233(1.17)  LDD0657  [9]
 LDCM0341  AC76 HCT 116 C233(0.63)  LDD0658  [9]
 LDCM0342  AC77 HCT 116 C233(1.02)  LDD0659  [9]
 LDCM0343  AC78 HCT 116 C233(0.62)  LDD0660  [9]
 LDCM0344  AC79 HCT 116 C233(0.69)  LDD0661  [9]
 LDCM0345  AC8 HEK-293T C233(1.01); C403(0.81)  LDD0943  [9]
 LDCM0346  AC80 HCT 116 C233(0.69)  LDD0663  [9]
 LDCM0347  AC81 HCT 116 C233(0.52)  LDD0664  [9]
 LDCM0348  AC82 HCT 116 C233(0.82)  LDD0665  [9]
 LDCM0349  AC83 PaTu 8988t C403(1.30)  LDD1228  [9]
 LDCM0350  AC84 PaTu 8988t C403(1.59)  LDD1229  [9]
 LDCM0351  AC85 PaTu 8988t C403(1.22)  LDD1230  [9]
 LDCM0352  AC86 PaTu 8988t C403(1.24)  LDD1231  [9]
 LDCM0353  AC87 PaTu 8988t C403(1.25)  LDD1232  [9]
 LDCM0354  AC88 PaTu 8988t C403(1.29)  LDD1233  [9]
 LDCM0355  AC89 PaTu 8988t C403(1.32)  LDD1234  [9]
 LDCM0357  AC90 PaTu 8988t C403(1.11)  LDD1236  [9]
 LDCM0358  AC91 PaTu 8988t C403(1.08)  LDD1237  [9]
 LDCM0359  AC92 PaTu 8988t C403(1.30)  LDD1238  [9]
 LDCM0360  AC93 PaTu 8988t C403(1.04)  LDD1239  [9]
 LDCM0361  AC94 PaTu 8988t C403(1.01)  LDD1240  [9]
 LDCM0362  AC95 PaTu 8988t C403(1.12)  LDD1241  [9]
 LDCM0363  AC96 PaTu 8988t C403(1.12)  LDD1242  [9]
 LDCM0364  AC97 PaTu 8988t C403(1.16)  LDD1243  [9]
 LDCM0365  AC98 HCT 116 C233(0.58); C403(1.04)  LDD0682  [9]
 LDCM0366  AC99 HCT 116 C233(0.69); C403(0.83)  LDD0683  [9]
 LDCM0545  Acetamide MDA-MB-231 C359(0.30)  LDD2138  [6]
 LDCM0248  AKOS034007472 HEK-293T C233(1.13); C403(1.22)  LDD0846  [9]
 LDCM0356  AKOS034007680 HEK-293T C233(1.12); C403(1.06)  LDD0954  [9]
 LDCM0275  AKOS034007705 HEK-293T C233(1.14); C403(1.07)  LDD0873  [9]
 LDCM0156  Aniline NCI-H1299 11.75  LDD0403  [1]
 LDCM0108  Chloroacetamide HeLa N.A.  LDD0222  [16]
 LDCM0632  CL-Sc Hep-G2 C403(1.04)  LDD2227  [19]
 LDCM0367  CL1 HCT 116 C233(0.73); C403(0.88)  LDD0684  [9]
 LDCM0368  CL10 HCT 116 C403(0.83); C233(0.96)  LDD0685  [9]
 LDCM0369  CL100 HCT 116 C233(1.13)  LDD0686  [9]
 LDCM0370  CL101 HEK-293T C233(0.89); C403(0.96)  LDD0968  [9]
 LDCM0371  CL102 HEK-293T C233(0.91); C403(1.10)  LDD0969  [9]
 LDCM0372  CL103 HEK-293T C233(1.07); C403(0.99)  LDD0970  [9]
 LDCM0373  CL104 HEK-293T C233(1.30); C403(1.20)  LDD0971  [9]
 LDCM0374  CL105 HCT 116 C233(0.77)  LDD0691  [9]
 LDCM0375  CL106 HCT 116 C233(0.72)  LDD0692  [9]
 LDCM0376  CL107 HCT 116 C233(0.77)  LDD0693  [9]
 LDCM0377  CL108 HCT 116 C233(0.67)  LDD0694  [9]
 LDCM0378  CL109 HCT 116 C233(1.30)  LDD0695  [9]
 LDCM0379  CL11 HCT 116 C403(0.73); C233(0.82)  LDD0696  [9]
 LDCM0380  CL110 HCT 116 C233(0.74)  LDD0697  [9]
 LDCM0381  CL111 HCT 116 C233(0.67)  LDD0698  [9]
 LDCM0382  CL112 HEK-293T C403(1.75); C233(0.99); C359(1.55)  LDD1586  [22]
 LDCM0383  CL113 HEK-293T C403(0.96); C233(1.01); C377(1.06)  LDD1587  [22]
 LDCM0384  CL114 HEK-293T C403(0.98); C233(1.14); C359(1.30)  LDD1588  [22]
 LDCM0385  CL115 HEK-293T C403(1.04); C233(1.20); C377(1.00); C359(1.45)  LDD1589  [22]
 LDCM0386  CL116 HEK-293T C403(1.25); C233(1.00); C359(1.61)  LDD1590  [22]
 LDCM0387  CL117 HCT 116 C403(0.94); C233(1.20)  LDD0704  [9]
 LDCM0388  CL118 HCT 116 C233(0.93); C403(1.17)  LDD0705  [9]
 LDCM0389  CL119 HCT 116 C403(0.95); C233(1.14)  LDD0706  [9]
 LDCM0390  CL12 HCT 116 C403(0.71); C233(1.31)  LDD0707  [9]
 LDCM0391  CL120 HCT 116 C403(0.86); C233(1.50)  LDD0708  [9]
 LDCM0392  CL121 HCT 116 C233(0.96)  LDD0709  [9]
 LDCM0393  CL122 HCT 116 C233(1.18)  LDD0710  [9]
 LDCM0394  CL123 HCT 116 C233(1.01)  LDD0711  [9]
 LDCM0395  CL124 HCT 116 C233(1.00)  LDD0712  [9]
 LDCM0396  CL125 HCT 116 C233(1.11)  LDD0713  [9]
 LDCM0397  CL126 HCT 116 C233(1.05)  LDD0714  [9]
 LDCM0398  CL127 HCT 116 C233(1.43)  LDD0715  [9]
 LDCM0399  CL128 HCT 116 C233(1.50)  LDD0716  [9]
 LDCM0400  CL13 HCT 116 C403(0.67); C233(0.98)  LDD0717  [9]
 LDCM0401  CL14 HCT 116 C403(0.67); C233(0.88)  LDD0718  [9]
 LDCM0402  CL15 HCT 116 C403(0.72); C233(1.10)  LDD0719  [9]
 LDCM0403  CL16 HCT 116 C403(1.27)  LDD0720  [9]
 LDCM0404  CL17 HCT 116 C403(0.91)  LDD0721  [9]
 LDCM0405  CL18 HCT 116 C403(1.00)  LDD0722  [9]
 LDCM0406  CL19 HCT 116 C403(1.00)  LDD0723  [9]
 LDCM0407  CL2 HCT 116 C403(0.68); C233(1.00)  LDD0724  [9]
 LDCM0408  CL20 HCT 116 C403(1.09)  LDD0725  [9]
 LDCM0409  CL21 HCT 116 C403(0.83)  LDD0726  [9]
 LDCM0410  CL22 HCT 116 C403(0.99)  LDD0727  [9]
 LDCM0411  CL23 HCT 116 C403(1.36)  LDD0728  [9]
 LDCM0412  CL24 HCT 116 C403(1.09)  LDD0729  [9]
 LDCM0413  CL25 HCT 116 C403(1.06)  LDD0730  [9]
 LDCM0414  CL26 HCT 116 C403(1.25)  LDD0731  [9]
 LDCM0415  CL27 HCT 116 C403(1.09)  LDD0732  [9]
 LDCM0416  CL28 HCT 116 C403(1.10)  LDD0733  [9]
 LDCM0417  CL29 HCT 116 C403(1.08)  LDD0734  [9]
 LDCM0418  CL3 HCT 116 C233(0.70); C403(0.71)  LDD0735  [9]
 LDCM0419  CL30 HCT 116 C403(1.13)  LDD0736  [9]
 LDCM0420  CL31 HCT 116 C403(0.84)  LDD0737  [9]
 LDCM0421  CL32 HCT 116 C403(1.05)  LDD0738  [9]
 LDCM0422  CL33 HCT 116 C403(1.15)  LDD0739  [9]
 LDCM0423  CL34 HCT 116 C403(1.04)  LDD0740  [9]
 LDCM0424  CL35 HCT 116 C403(1.06)  LDD0741  [9]
 LDCM0425  CL36 HCT 116 C403(1.05)  LDD0742  [9]
 LDCM0426  CL37 HCT 116 C403(1.07)  LDD0743  [9]
 LDCM0428  CL39 HCT 116 C403(0.99)  LDD0745  [9]
 LDCM0429  CL4 HCT 116 C233(0.88); C403(0.89)  LDD0746  [9]
 LDCM0430  CL40 HCT 116 C403(1.11)  LDD0747  [9]
 LDCM0431  CL41 HCT 116 C403(0.96)  LDD0748  [9]
 LDCM0432  CL42 HCT 116 C403(0.96)  LDD0749  [9]
 LDCM0433  CL43 HCT 116 C403(1.06)  LDD0750  [9]
 LDCM0434  CL44 HCT 116 C403(1.13)  LDD0751  [9]
 LDCM0435  CL45 HCT 116 C403(1.06)  LDD0752  [9]
 LDCM0436  CL46 HCT 116 C403(1.13)  LDD0753  [9]
 LDCM0437  CL47 HCT 116 C403(0.91)  LDD0754  [9]
 LDCM0438  CL48 HCT 116 C403(1.04)  LDD0755  [9]
 LDCM0439  CL49 HCT 116 C403(1.25)  LDD0756  [9]
 LDCM0440  CL5 HCT 116 C233(0.92); C403(0.61)  LDD0757  [9]
 LDCM0441  CL50 HCT 116 C403(1.11)  LDD0758  [9]
 LDCM0442  CL51 HCT 116 C403(1.19)  LDD0759  [9]
 LDCM0443  CL52 HCT 116 C403(0.95)  LDD0760  [9]
 LDCM0444  CL53 HCT 116 C403(0.75)  LDD0761  [9]
 LDCM0445  CL54 HCT 116 C403(1.02)  LDD0762  [9]
 LDCM0446  CL55 HCT 116 C403(0.79)  LDD0763  [9]
 LDCM0447  CL56 HCT 116 C403(0.94)  LDD0764  [9]
 LDCM0448  CL57 HCT 116 C403(1.03)  LDD0765  [9]
 LDCM0449  CL58 HCT 116 C403(1.18)  LDD0766  [9]
 LDCM0450  CL59 HCT 116 C403(0.98)  LDD0767  [9]
 LDCM0451  CL6 HCT 116 C233(0.72); C403(0.87)  LDD0768  [9]
 LDCM0452  CL60 HCT 116 C403(0.97)  LDD0769  [9]
 LDCM0453  CL61 HCT 116 C403(1.04)  LDD0770  [9]
 LDCM0454  CL62 HCT 116 C403(1.23)  LDD0771  [9]
 LDCM0455  CL63 HCT 116 C403(1.35)  LDD0772  [9]
 LDCM0456  CL64 HCT 116 C403(1.15)  LDD0773  [9]
 LDCM0457  CL65 HCT 116 C403(1.34)  LDD0774  [9]
 LDCM0458  CL66 HCT 116 C403(1.22)  LDD0775  [9]
 LDCM0459  CL67 HCT 116 C403(1.14)  LDD0776  [9]
 LDCM0460  CL68 HCT 116 C403(1.34)  LDD0777  [9]
 LDCM0461  CL69 HCT 116 C403(1.31)  LDD0778  [9]
 LDCM0462  CL7 HCT 116 C233(0.67); C403(0.83)  LDD0779  [9]
 LDCM0463  CL70 HCT 116 C403(1.14)  LDD0780  [9]
 LDCM0464  CL71 HCT 116 C403(1.09)  LDD0781  [9]
 LDCM0465  CL72 HCT 116 C403(1.30)  LDD0782  [9]
 LDCM0466  CL73 HCT 116 C403(1.09)  LDD0783  [9]
 LDCM0467  CL74 HCT 116 C403(1.14)  LDD0784  [9]
 LDCM0469  CL76 HEK-293T C403(0.97)  LDD1067  [9]
 LDCM0470  CL77 HEK-293T C403(0.88)  LDD1068  [9]
 LDCM0471  CL78 HEK-293T C403(1.19)  LDD1069  [9]
 LDCM0472  CL79 HEK-293T C403(1.06)  LDD1070  [9]
 LDCM0473  CL8 HCT 116 C233(0.87); C403(0.71)  LDD0790  [9]
 LDCM0474  CL80 HEK-293T C403(1.04)  LDD1072  [9]
 LDCM0475  CL81 HEK-293T C403(1.04)  LDD1073  [9]
 LDCM0476  CL82 HEK-293T C403(0.92)  LDD1074  [9]
 LDCM0477  CL83 HEK-293T C403(0.82)  LDD1075  [9]
 LDCM0478  CL84 HEK-293T C403(0.96)  LDD1076  [9]
 LDCM0479  CL85 HEK-293T C403(0.97)  LDD1077  [9]
 LDCM0480  CL86 HEK-293T C403(1.33)  LDD1078  [9]
 LDCM0481  CL87 HEK-293T C403(0.92)  LDD1079  [9]
 LDCM0482  CL88 HEK-293T C403(0.95)  LDD1080  [9]
 LDCM0483  CL89 HEK-293T C403(1.03)  LDD1081  [9]
 LDCM0484  CL9 HCT 116 C233(0.73); C403(0.89)  LDD0801  [9]
 LDCM0485  CL90 HEK-293T C403(0.73)  LDD1083  [9]
 LDCM0486  CL91 HCT 116 C233(1.06)  LDD0803  [9]
 LDCM0487  CL92 HCT 116 C233(1.12)  LDD0804  [9]
 LDCM0488  CL93 HCT 116 C233(0.93)  LDD0805  [9]
 LDCM0489  CL94 HCT 116 C233(1.05)  LDD0806  [9]
 LDCM0490  CL95 HCT 116 C233(1.04)  LDD0807  [9]
 LDCM0491  CL96 HCT 116 C233(0.92)  LDD0808  [9]
 LDCM0492  CL97 HCT 116 C233(0.87)  LDD0809  [9]
 LDCM0493  CL98 HCT 116 C233(1.15)  LDD0810  [9]
 LDCM0494  CL99 HCT 116 C233(1.13)  LDD0811  [9]
 LDCM0495  E2913 HEK-293T C403(1.00); C233(1.28); C377(0.99); C359(1.22)  LDD1698  [22]
 LDCM0625  F8 Ramos C403(0.81)  LDD2187  [23]
 LDCM0572  Fragment10 Ramos C403(0.33)  LDD2189  [23]
 LDCM0573  Fragment11 Ramos C403(0.92)  LDD2190  [23]
 LDCM0574  Fragment12 Ramos C403(0.39)  LDD2191  [23]
 LDCM0576  Fragment14 Ramos C403(1.27)  LDD2193  [23]
 LDCM0579  Fragment20 Ramos C403(0.20)  LDD2194  [23]
 LDCM0580  Fragment21 Ramos C403(0.65)  LDD2195  [23]
 LDCM0582  Fragment23 Ramos C403(0.91)  LDD2196  [23]
 LDCM0588  Fragment30 Ramos C403(0.49)  LDD2199  [23]
 LDCM0590  Fragment32 Ramos C403(0.25)  LDD2201  [23]
 LDCM0468  Fragment33 HCT 116 C403(1.37)  LDD0785  [9]
 LDCM0596  Fragment38 Ramos C403(1.42)  LDD2203  [23]
 LDCM0566  Fragment4 Ramos C403(0.43)  LDD2184  [23]
 LDCM0427  Fragment51 HCT 116 C403(0.91)  LDD0744  [9]
 LDCM0569  Fragment7 Ramos C403(0.64)  LDD2186  [23]
 LDCM0571  Fragment9 Ramos C403(0.30)  LDD2188  [23]
 LDCM0116  HHS-0101 DM93 Y45(0.97)  LDD0264  [7]
 LDCM0117  HHS-0201 DM93 Y45(0.81)  LDD0265  [7]
 LDCM0118  HHS-0301 DM93 Y45(0.84)  LDD0266  [7]
 LDCM0119  HHS-0401 DM93 Y45(1.20)  LDD0267  [7]
 LDCM0120  HHS-0701 DM93 Y45(0.91)  LDD0268  [7]
 LDCM0022  KB02 HCT 116 C403(1.58)  LDD0080  [9]
 LDCM0023  KB03 HCT 116 C403(1.95)  LDD0081  [9]
 LDCM0024  KB05 HCT 116 C403(1.48)  LDD0082  [9]
 LDCM0496  Nucleophilic fragment 11a MDA-MB-231 C359(0.61)  LDD2089  [6]
 LDCM0499  Nucleophilic fragment 12b MDA-MB-231 C359(0.91)  LDD2092  [6]
 LDCM0500  Nucleophilic fragment 13a MDA-MB-231 C60(1.06)  LDD2093  [6]
 LDCM0501  Nucleophilic fragment 13b MDA-MB-231 C359(0.99)  LDD2094  [6]
 LDCM0503  Nucleophilic fragment 14b MDA-MB-231 C359(0.84); C60(0.10)  LDD2096  [6]
 LDCM0506  Nucleophilic fragment 16a MDA-MB-231 C359(0.95)  LDD2099  [6]
 LDCM0514  Nucleophilic fragment 20a MDA-MB-231 C359(1.05)  LDD2107  [6]
 LDCM0516  Nucleophilic fragment 21a MDA-MB-231 C359(1.11); C60(0.42)  LDD2109  [6]
 LDCM0518  Nucleophilic fragment 22a MDA-MB-231 C359(0.93); C60(1.09)  LDD2111  [6]
 LDCM0525  Nucleophilic fragment 25b MDA-MB-231 C359(0.69); C60(0.35)  LDD2118  [6]
 LDCM0526  Nucleophilic fragment 26a MDA-MB-231 C60(2.77)  LDD2119  [6]
 LDCM0527  Nucleophilic fragment 26b MDA-MB-231 C60(0.83)  LDD2120  [6]
 LDCM0530  Nucleophilic fragment 28a MDA-MB-231 C359(0.68); C60(0.92)  LDD2123  [6]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C359(0.87)  LDD2125  [6]
 LDCM0534  Nucleophilic fragment 30a MDA-MB-231 C359(1.15)  LDD2127  [6]
 LDCM0536  Nucleophilic fragment 31 MDA-MB-231 C359(0.88); C60(1.41)  LDD2129  [6]
 LDCM0543  Nucleophilic fragment 38 MDA-MB-231 C359(1.09); C403(0.81)  LDD2136  [6]
 LDCM0544  Nucleophilic fragment 39 MDA-MB-231 C359(0.84); C60(1.13); C403(0.92)  LDD2137  [6]
 LDCM0211  Nucleophilic fragment 3b MDA-MB-231 C60(2.74)  LDD1700  [6]
 LDCM0546  Nucleophilic fragment 40 MDA-MB-231 C359(0.87)  LDD2140  [6]
 LDCM0549  Nucleophilic fragment 43 MDA-MB-231 C60(0.67)  LDD2143  [6]
 LDCM0552  Nucleophilic fragment 6a MDA-MB-231 C359(0.73); C60(0.91)  LDD2146  [6]
 LDCM0555  Nucleophilic fragment 7b MDA-MB-231 C60(0.15)  LDD2149  [6]
 LDCM0556  Nucleophilic fragment 8a MDA-MB-231 C359(0.32)  LDD2150  [6]
 LDCM0557  Nucleophilic fragment 8b MDA-MB-231 C60(0.13)  LDD2151  [6]
 LDCM0628  OTUB2-COV-1 HEK-293T C233(0.71)  LDD2207  [24]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Transporter and channel
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Chloride intracellular channel protein 3 (CLIC3) Chloride channel CLIC family O95833
Other
Click To Hide/Show 3 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Charged multivesicular body protein 1a (CHMP1A) SNF7 family Q9HD42
Charged multivesicular body protein 1b (CHMP1B) SNF7 family Q7LBR1
Charged multivesicular body protein 2a (CHMP2A) SNF7 family O43633

References

1 Quantitative and Site-Specific Chemoproteomic Profiling of Targets of Acrolein. Chem Res Toxicol. 2019 Mar 18;32(3):467-473. doi: 10.1021/acs.chemrestox.8b00343. Epub 2019 Jan 15.
2 Low-Toxicity Sulfonium-Based Probes for Cysteine-Specific Profiling in Live Cells. Anal Chem. 2022 Mar 15;94(10):4366-4372. doi: 10.1021/acs.analchem.1c05129. Epub 2022 Mar 4.
3 Chemoproteomic profiling of kinases in live cells using electrophilic sulfonyl triazole probes. Chem Sci. 2021 Jan 21;12(9):3295-3307. doi: 10.1039/d0sc06623k.
4 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
5 An Azo Coupling-Based Chemoproteomic Approach to Systematically Profile the Tyrosine Reactivity in the Human Proteome. Anal Chem. 2021 Jul 27;93(29):10334-10342. doi: 10.1021/acs.analchem.1c01935. Epub 2021 Jul 12.
6 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
7 Discovery of a Cell-Active SuTEx Ligand of Prostaglandin Reductase 2. Chembiochem. 2021 Jun 15;22(12):2134-2139. doi: 10.1002/cbic.202000879. Epub 2021 Apr 29.
8 Global targeting of functional tyrosines using sulfur-triazole exchange chemistry. Nat Chem Biol. 2020 Feb;16(2):150-159. doi: 10.1038/s41589-019-0404-5. Epub 2019 Nov 25.
9 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
10 Targeted Proteomic Approaches for Proteome-Wide Characterizations of the AMP-Binding Capacities of Kinases. J Proteome Res. 2022 Aug 5;21(8):2063-2070. doi: 10.1021/acs.jproteome.2c00225. Epub 2022 Jul 12.
11 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
12 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
13 Solid Phase Synthesis of Fluorosulfate Containing Macrocycles for Chemoproteomic Workflows. bioRxiv [Preprint]. 2023 Feb 18:2023.02.17.529022. doi: 10.1101/2023.02.17.529022.
Mass spectrometry data entry: PXD039931
14 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
15 DFT-Guided Discovery of Ethynyl-Triazolyl-Phosphinates as Modular Electrophiles for Chemoselective Cysteine Bioconjugation and Profiling. Angew Chem Int Ed Engl. 2022 Oct 10;61(41):e202205348. doi: 10.1002/anie.202205348. Epub 2022 Aug 22.
Mass spectrometry data entry: PXD033004
16 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
17 Oxidant-Induced Bioconjugation for Protein Labeling in Live Cells. ACS Chem Biol. 2023 Jan 20;18(1):112-122. doi: 10.1021/acschembio.2c00740. Epub 2022 Dec 21.
18 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
19 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
20 Ligand and Target Discovery by Fragment-Based Screening in Human Cells. Cell. 2017 Jan 26;168(3):527-541.e29. doi: 10.1016/j.cell.2016.12.029. Epub 2017 Jan 19.
21 Pharmacological Targeting of Vacuolar H(+)-ATPase via Subunit V1G Combats Multidrug-Resistant Cancer. Cell Chem Biol. 2020 Nov 19;27(11):1359-1370.e8. doi: 10.1016/j.chembiol.2020.06.011. Epub 2020 Jul 9.
22 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
23 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
24 Rapid Covalent-Probe Discovery by Electrophile-Fragment Screening. J Am Chem Soc. 2019 Jun 5;141(22):8951-8968. doi: 10.1021/jacs.9b02822. Epub 2019 May 22.