General Information of Target

Target ID LDTP12904
Target Name Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)
Gene Name IGF2BP1
Gene ID 10642
Synonyms
CRDBP; VICKZ1; ZBP1; Insulin-like growth factor 2 mRNA-binding protein 1; IGF2 mRNA-binding protein 1; IMP-1; IMP1; Coding region determinant-binding protein; CRD-BP; IGF-II mRNA-binding protein 1; VICKZ family member 1; Zipcode-binding protein 1; ZBP-1
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE
HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV
FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY
GDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS
GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS
LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR
KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK
Target Bioclass
Other
Family
RRM IMP/VICKZ family
Subcellular location
Nucleus
Function
RNA-binding factor that recruits target transcripts to cytoplasmic protein-RNA complexes (mRNPs). This transcript 'caging' into mRNPs allows mRNA transport and transient storage. It also modulates the rate and location at which target transcripts encounter the translational apparatus and shields them from endonuclease attacks or microRNA-mediated degradation. Preferentially binds to N6-methyladenosine (m6A)-containing mRNAs and increases their stability. Plays a direct role in the transport and translation of transcripts required for axonal regeneration in adult sensory neurons. Regulates localized beta-actin/ACTB mRNA translation, a crucial process for cell polarity, cell migration and neurite outgrowth. Co-transcriptionally associates with the ACTB mRNA in the nucleus. This binding involves a conserved 54-nucleotide element in the ACTB mRNA 3'-UTR, known as the 'zipcode'. The RNP thus formed is exported to the cytoplasm, binds to a motor protein and is transported along the cytoskeleton to the cell periphery. During transport, prevents ACTB mRNA from being translated into protein. When the RNP complex reaches its destination near the plasma membrane, IGF2BP1 is phosphorylated. This releases the mRNA, allowing ribosomal 40S and 60S subunits to assemble and initiate ACTB protein synthesis. Monomeric ACTB then assembles into the subcortical actin cytoskeleton. During neuronal development, key regulator of neurite outgrowth, growth cone guidance and neuronal cell migration, presumably through the spatiotemporal fine tuning of protein synthesis, such as that of ACTB. May regulate mRNA transport to activated synapses. Binds to and stabilizes ABCB1/MDR-1 mRNA. During interstinal wound repair, interacts with and stabilizes PTGS2 transcript. PTGS2 mRNA stabilization may be crucial for colonic mucosal wound healing. Binds to the 3'-UTR of IGF2 mRNA by a mechanism of cooperative and sequential dimerization and regulates IGF2 mRNA subcellular localization and translation. Binds to MYC mRNA, in the coding region instability determinant (CRD) of the open reading frame (ORF), hence preventing MYC cleavage by endonucleases and possibly microRNA targeting to MYC-CRD. Binding to MYC mRNA is enhanced by m6A-modification of the CRD. Binds to the 3'-UTR of CD44 mRNA and stabilizes it, hence promotes cell adhesion and invadopodia formation in cancer cells. Binds to the oncofetal H19 transcript and to the neuron-specific TAU mRNA and regulates their localizations. Binds to and stabilizes BTRC/FBW1A mRNA. Binds to the adenine-rich autoregulatory sequence (ARS) located in PABPC1 mRNA and represses its translation. PABPC1 mRNA-binding is stimulated by PABPC1 protein. Prevents BTRC/FBW1A mRNA degradation by disrupting microRNA-dependent interaction with AGO2. Promotes the directed movement of tumor-derived cells by fine-tuning intracellular signaling networks. Binds to MAPK4 3'-UTR and inhibits its translation. Interacts with PTEN transcript open reading frame (ORF) and prevents mRNA decay. This combined action on MAPK4 (down-regulation) and PTEN (up-regulation) antagonizes HSPB1 phosphorylation, consequently it prevents G-actin sequestration by phosphorylated HSPB1, allowing F-actin polymerization. Hence enhances the velocity of cell migration and stimulates directed cell migration by PTEN-modulated polarization. Interacts with Hepatitis C virus (HCV) 5'-UTR and 3'-UTR and specifically enhances translation at the HCV IRES, but not 5'-cap-dependent translation, possibly by recruiting eIF3. Interacts with HIV-1 GAG protein and blocks the formation of infectious HIV-1 particles. Reduces HIV-1 assembly by inhibiting viral RNA packaging, as well as assembly and processing of GAG protein on cellular membranes. During cellular stress, such as oxidative stress or heat shock, stabilizes target mRNAs that are recruited to stress granules, including CD44, IGF2, MAPK4, MYC, PTEN, RAPGEF2 and RPS6KA5 transcripts.
Uniprot ID
Q9NZI8
Ensemble ID
ENST00000290341.8
HGNC ID
HGNC:28866

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
COLO320 SNV: p.A356P DBIA    Probe Info 
COLO678 SNV: p.A356P .
COLO792 SNV: p.R233K .
COLO800 SNV: p.K76I DBIA    Probe Info 
HCT15 SNV: p.A357T .
HEC1B SNV: p.L18S .
IM95 SNV: p.Y206H .
MEWO SNV: p.G65E .
NCIH196 SNV: p.I556F DBIA    Probe Info 
NCIH716 SNV: p.A357G .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 28 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
A-EBA
 Probe Info 
4.06  LDD0215  [1]
TH211
 Probe Info 
Y206(17.44); Y5(14.76)  LDD0257  [2]
TH216
 Probe Info 
Y206(10.85)  LDD0259  [2]
YN-1
 Probe Info 
100.00  LDD0444  [3]
YN-4
 Probe Info 
100.00  LDD0445  [3]
ONAyne
 Probe Info 
K280(0.00); K566(0.00)  LDD0273  [4]
IPM
 Probe Info 
C44(0.00); C257(0.00); C336(0.00); C337(0.00)  LDD0241  [5]
BTD
 Probe Info 
C336(0.74)  LDD2117  [6]
Johansson_61
 Probe Info 
_(20.00)  LDD1489  [7]
DBIA
 Probe Info 
C337(105.23)  LDD0209  [8]
Acrolein
 Probe Info 
H247(0.00); C257(0.00)  LDD0221  [9]
5E-2FA
 Probe Info 
N.A.  LDD2235  [10]
AMP probe
 Probe Info 
K76(0.00); K77(0.00)  LDD0200  [11]
ATP probe
 Probe Info 
K76(0.00); K77(0.00); K242(0.00); K483(0.00)  LDD0199  [11]
m-APA
 Probe Info 
H247(0.00); H142(0.00)  LDD2231  [10]
4-Iodoacetamidophenylacetylene
 Probe Info 
N.A.  LDD0038  [12]
IA-alkyne
 Probe Info 
C44(0.00); C253(0.00)  LDD0032  [13]
Lodoacetamide azide
 Probe Info 
C44(0.00); C253(0.00); C257(0.00)  LDD0037  [12]
1d-yne
 Probe Info 
N.A.  LDD0356  [14]
ENE
 Probe Info 
N.A.  LDD0006  [15]
NHS
 Probe Info 
K440(0.00); K483(0.00); K561(0.00); K475(0.00)  LDD0010  [15]
SF
 Probe Info 
Y544(0.00); Y321(0.00)  LDD0028  [16]
STPyne
 Probe Info 
K566(0.00); K561(0.00)  LDD0009  [15]
TFBX
 Probe Info 
N.A.  LDD0148  [17]
1c-yne
 Probe Info 
K440(0.00); K150(0.00); K280(0.00); K508(0.00)  LDD0228  [14]
Methacrolein
 Probe Info 
C253(0.00); C337(0.00)  LDD0218  [9]
W1
 Probe Info 
C44(0.00); C336(0.00); C257(0.00); C337(0.00)  LDD0236  [5]
AOyne
 Probe Info 
5.20  LDD0443  [18]
PAL-AfBPP Probe
Click To Hide/Show 9 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
FFF probe11
 Probe Info 
6.29  LDD0472  [19]
FFF probe12
 Probe Info 
5.53  LDD0473  [19]
FFF probe13
 Probe Info 
10.58  LDD0475  [19]
FFF probe3
 Probe Info 
6.47  LDD0464  [19]
JN0003
 Probe Info 
6.31  LDD0469  [19]
STS-2
 Probe Info 
N.A.  LDD0138  [20]
VE-P
 Probe Info 
N.A.  LDD0396  [21]
DA-2
 Probe Info 
N.A.  LDD0073  [22]
STS-1
 Probe Info 
N.A.  LDD0068  [23]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0524  2-Cyano-N-(2-morpholin-4-yl-ethyl)-acetamide MDA-MB-231 C336(0.74)  LDD2117  [6]
 LDCM0214  AC1 HEK-293T C44(0.97); C110(0.93); C337(1.05)  LDD1507  [24]
 LDCM0215  AC10 HEK-293T C44(1.01); C253(0.99)  LDD1508  [24]
 LDCM0226  AC11 HEK-293T C44(1.08); C257(1.04); C337(0.93)  LDD1509  [24]
 LDCM0237  AC12 HEK-293T C44(1.07); C110(0.93); C253(0.87)  LDD1510  [24]
 LDCM0259  AC14 HEK-293T C44(1.04); C110(1.10)  LDD1512  [24]
 LDCM0270  AC15 HEK-293T C44(1.04); C110(0.96); C253(0.79)  LDD1513  [24]
 LDCM0276  AC17 HEK-293T C44(1.00); C110(1.23); C337(0.97)  LDD1515  [24]
 LDCM0277  AC18 HEK-293T C44(1.03); C253(1.02)  LDD1516  [24]
 LDCM0278  AC19 HEK-293T C44(0.94); C257(1.04); C337(0.84)  LDD1517  [24]
 LDCM0279  AC2 HEK-293T C44(1.07); C253(0.98)  LDD1518  [24]
 LDCM0280  AC20 HEK-293T C44(1.06); C110(0.95); C253(0.89)  LDD1519  [24]
 LDCM0281  AC21 HEK-293T C44(1.02); C110(1.07); C257(0.79); C253(0.84)  LDD1520  [24]
 LDCM0282  AC22 HEK-293T C44(1.14); C110(0.87)  LDD1521  [24]
 LDCM0283  AC23 HEK-293T C44(1.17); C110(1.11); C253(1.08)  LDD1522  [24]
 LDCM0284  AC24 HEK-293T C44(1.08); C257(1.04); C253(1.42); C337(0.97)  LDD1523  [24]
 LDCM0285  AC25 HEK-293T C44(0.96); C110(0.87); C337(1.01)  LDD1524  [24]
 LDCM0286  AC26 HEK-293T C44(1.14); C253(1.00)  LDD1525  [24]
 LDCM0287  AC27 HEK-293T C44(1.06); C257(1.06); C337(0.99)  LDD1526  [24]
 LDCM0288  AC28 HEK-293T C44(1.07); C110(0.83); C253(0.92)  LDD1527  [24]
 LDCM0289  AC29 HEK-293T C44(1.04); C110(1.09); C257(1.04); C253(0.99)  LDD1528  [24]
 LDCM0290  AC3 HEK-293T C44(1.05); C257(0.97); C337(0.97)  LDD1529  [24]
 LDCM0291  AC30 HEK-293T C44(1.14); C110(1.04)  LDD1530  [24]
 LDCM0292  AC31 HEK-293T C44(1.09); C110(1.05); C253(1.10)  LDD1531  [24]
 LDCM0293  AC32 HEK-293T C44(1.05); C257(1.11); C253(1.10); C337(1.04)  LDD1532  [24]
 LDCM0294  AC33 HEK-293T C44(1.02); C110(0.89); C337(0.96)  LDD1533  [24]
 LDCM0295  AC34 HEK-293T C44(1.04); C253(0.95)  LDD1534  [24]
 LDCM0296  AC35 HEK-293T C44(1.04); C257(0.97); C337(0.88)  LDD1535  [24]
 LDCM0297  AC36 HEK-293T C44(1.07); C110(1.06); C253(0.87)  LDD1536  [24]
 LDCM0298  AC37 HEK-293T C44(1.08); C110(1.22); C257(1.04); C253(1.13)  LDD1537  [24]
 LDCM0299  AC38 HEK-293T C44(1.13); C110(1.22)  LDD1538  [24]
 LDCM0300  AC39 HEK-293T C44(1.05); C110(0.88); C253(1.03)  LDD1539  [24]
 LDCM0301  AC4 HEK-293T C44(1.10); C110(0.86); C253(0.95)  LDD1540  [24]
 LDCM0302  AC40 HEK-293T C44(1.05); C257(1.20); C253(0.88); C337(1.06)  LDD1541  [24]
 LDCM0303  AC41 HEK-293T C44(1.05); C110(0.82); C337(0.97)  LDD1542  [24]
 LDCM0304  AC42 HEK-293T C44(0.97); C253(0.93)  LDD1543  [24]
 LDCM0305  AC43 HEK-293T C44(1.11); C257(1.04); C337(0.90)  LDD1544  [24]
 LDCM0306  AC44 HEK-293T C44(1.12); C110(0.94); C253(0.82)  LDD1545  [24]
 LDCM0307  AC45 HEK-293T C44(1.02); C110(0.96); C257(0.98); C253(0.97)  LDD1546  [24]
 LDCM0308  AC46 HEK-293T C44(1.06); C110(1.04)  LDD1547  [24]
 LDCM0309  AC47 HEK-293T C44(1.11); C110(1.13); C253(0.83)  LDD1548  [24]
 LDCM0310  AC48 HEK-293T C44(1.09); C257(1.02); C253(0.85); C337(1.15)  LDD1549  [24]
 LDCM0311  AC49 HEK-293T C44(0.98); C110(0.89); C337(0.90)  LDD1550  [24]
 LDCM0312  AC5 HEK-293T C44(1.05); C110(1.00); C257(1.13); C253(0.83)  LDD1551  [24]
 LDCM0313  AC50 HEK-293T C44(0.95); C253(0.94)  LDD1552  [24]
 LDCM0314  AC51 HEK-293T C44(1.07); C257(0.90); C337(0.92)  LDD1553  [24]
 LDCM0315  AC52 HEK-293T C44(1.09); C110(0.98); C253(0.84)  LDD1554  [24]
 LDCM0316  AC53 HEK-293T C44(1.02); C110(1.04); C257(1.10); C253(0.87)  LDD1555  [24]
 LDCM0317  AC54 HEK-293T C44(1.04); C110(1.01)  LDD1556  [24]
 LDCM0318  AC55 HEK-293T C44(1.07); C110(0.83); C253(0.68)  LDD1557  [24]
 LDCM0319  AC56 HEK-293T C44(1.01); C257(0.97); C253(0.86); C337(1.12)  LDD1558  [24]
 LDCM0320  AC57 HEK-293T C44(0.98); C110(1.16); C337(0.97)  LDD1559  [24]
 LDCM0321  AC58 HEK-293T C44(1.06); C253(0.90)  LDD1560  [24]
 LDCM0322  AC59 HEK-293T C44(1.11); C257(0.96); C337(0.90)  LDD1561  [24]
 LDCM0323  AC6 HEK-293T C44(0.96); C110(0.99)  LDD1562  [24]
 LDCM0324  AC60 HEK-293T C44(1.01); C110(0.99); C253(0.91)  LDD1563  [24]
 LDCM0325  AC61 HEK-293T C44(1.05); C110(0.95); C257(0.78); C253(0.70)  LDD1564  [24]
 LDCM0326  AC62 HEK-293T C44(1.06); C110(0.98)  LDD1565  [24]
 LDCM0327  AC63 HEK-293T C44(1.07); C110(0.78); C253(0.80)  LDD1566  [24]
 LDCM0328  AC64 HEK-293T C44(1.07); C257(0.99); C253(0.84); C337(1.07)  LDD1567  [24]
 LDCM0334  AC7 HEK-293T C44(1.06); C110(0.90); C253(0.86)  LDD1568  [24]
 LDCM0345  AC8 HEK-293T C44(1.06); C257(1.14); C253(1.09); C337(1.11)  LDD1569  [24]
 LDCM0248  AKOS034007472 HEK-293T C44(1.01); C110(1.01); C257(1.15); C253(0.79)  LDD1511  [24]
 LDCM0356  AKOS034007680 HEK-293T C44(0.98); C110(1.08); C337(1.00)  LDD1570  [24]
 LDCM0275  AKOS034007705 HEK-293T C44(0.98); C257(0.99); C253(1.02); C337(1.12)  LDD1514  [24]
 LDCM0108  Chloroacetamide HeLa N.A.  LDD0222  [9]
 LDCM0367  CL1 HEK-293T C44(1.09); C110(0.78); C253(0.86); C337(1.01)  LDD1571  [24]
 LDCM0368  CL10 HEK-293T C44(1.14); C110(0.73)  LDD1572  [24]
 LDCM0369  CL100 HEK-293T C44(1.02)  LDD1573  [24]
 LDCM0370  CL101 HEK-293T C44(0.99); C110(1.13); C253(0.74); C337(1.04)  LDD1574  [24]
 LDCM0371  CL102 HEK-293T C44(0.96); C110(0.83); C253(0.87); C337(0.88)  LDD1575  [24]
 LDCM0372  CL103 HEK-293T C44(1.02); C253(1.00)  LDD1576  [24]
 LDCM0373  CL104 HEK-293T C44(1.00)  LDD1577  [24]
 LDCM0374  CL105 HEK-293T C44(1.02); C110(0.97); C253(0.82); C337(0.95)  LDD1578  [24]
 LDCM0375  CL106 HEK-293T C44(1.10); C110(0.73); C253(0.92); C337(0.88)  LDD1579  [24]
 LDCM0376  CL107 HEK-293T C44(1.10); C253(0.69)  LDD1580  [24]
 LDCM0377  CL108 HEK-293T C44(1.02)  LDD1581  [24]
 LDCM0378  CL109 HEK-293T C44(1.00); C110(1.12); C253(0.87); C337(1.13)  LDD1582  [24]
 LDCM0379  CL11 HEK-293T C44(1.08); C110(0.91); C253(0.97)  LDD1583  [24]
 LDCM0380  CL110 HEK-293T C44(1.00); C110(0.66); C253(1.04); C337(0.99)  LDD1584  [24]
 LDCM0381  CL111 HEK-293T C44(1.00); C253(1.04)  LDD1585  [24]
 LDCM0382  CL112 HEK-293T C44(0.96)  LDD1586  [24]
 LDCM0383  CL113 HEK-293T C44(1.00); C110(0.97); C253(0.89); C337(1.02)  LDD1587  [24]
 LDCM0384  CL114 HEK-293T C44(0.97); C110(0.87); C253(0.92); C337(0.84)  LDD1588  [24]
 LDCM0385  CL115 HEK-293T C44(1.12); C253(0.79)  LDD1589  [24]
 LDCM0386  CL116 HEK-293T C44(1.00)  LDD1590  [24]
 LDCM0387  CL117 HEK-293T C44(1.03); C110(0.81); C253(0.87); C337(1.09)  LDD1591  [24]
 LDCM0388  CL118 HEK-293T C44(1.02); C110(0.97); C253(0.74); C337(0.82)  LDD1592  [24]
 LDCM0389  CL119 HEK-293T C44(1.10); C253(1.04)  LDD1593  [24]
 LDCM0390  CL12 HEK-293T C44(1.19); C257(0.92); C253(0.82); C337(1.14)  LDD1594  [24]
 LDCM0391  CL120 HEK-293T C44(1.05)  LDD1595  [24]
 LDCM0392  CL121 HEK-293T C44(0.99); C110(1.51); C253(0.75); C337(0.98)  LDD1596  [24]
 LDCM0393  CL122 HEK-293T C44(0.96); C110(0.66); C253(0.57); C337(1.01)  LDD1597  [24]
 LDCM0394  CL123 HEK-293T C44(1.08); C253(0.77)  LDD1598  [24]
 LDCM0395  CL124 HEK-293T C44(0.99)  LDD1599  [24]
 LDCM0396  CL125 HEK-293T C44(1.13); C110(1.20); C253(0.58); C337(1.04)  LDD1600  [24]
 LDCM0397  CL126 HEK-293T C44(1.07); C110(0.70); C253(0.53); C337(0.96)  LDD1601  [24]
 LDCM0398  CL127 HEK-293T C44(1.08); C253(0.63)  LDD1602  [24]
 LDCM0399  CL128 HEK-293T C44(1.04)  LDD1603  [24]
 LDCM0400  CL13 HEK-293T C44(0.97); C110(1.71); C253(0.62); C337(0.84)  LDD1604  [24]
 LDCM0401  CL14 HEK-293T C44(1.18); C110(0.82); C253(0.73); C337(0.91)  LDD1605  [24]
 LDCM0402  CL15 HEK-293T C44(0.90); C253(0.68)  LDD1606  [24]
 LDCM0403  CL16 HEK-293T C44(1.12)  LDD1607  [24]
 LDCM0404  CL17 HEK-293T C44(0.91); C110(1.20); C337(0.93)  LDD1608  [24]
 LDCM0405  CL18 HEK-293T C44(1.14); C253(0.91)  LDD1609  [24]
 LDCM0406  CL19 HEK-293T C44(1.06); C257(0.94); C337(0.99)  LDD1610  [24]
 LDCM0407  CL2 HEK-293T C44(1.04); C110(0.72); C253(0.85); C337(0.91)  LDD1611  [24]
 LDCM0408  CL20 HEK-293T C44(1.03); C110(0.99); C253(0.87)  LDD1612  [24]
 LDCM0409  CL21 HEK-293T C44(1.12); C110(1.10); C257(0.70); C253(0.65)  LDD1613  [24]
 LDCM0410  CL22 HEK-293T C44(1.07); C110(1.20)  LDD1614  [24]
 LDCM0411  CL23 HEK-293T C44(1.11); C110(1.02); C253(1.04)  LDD1615  [24]
 LDCM0412  CL24 HEK-293T C44(1.11); C257(1.12); C253(0.83); C337(1.13)  LDD1616  [24]
 LDCM0413  CL25 HEK-293T C44(0.95); C110(1.25); C253(0.65); C337(0.97)  LDD1617  [24]
 LDCM0414  CL26 HEK-293T C44(1.10); C110(1.13); C253(0.81); C337(0.94)  LDD1618  [24]
 LDCM0415  CL27 HEK-293T C44(1.10); C253(0.81)  LDD1619  [24]
 LDCM0416  CL28 HEK-293T C44(1.00)  LDD1620  [24]
 LDCM0417  CL29 HEK-293T C44(1.04); C110(0.76); C337(0.99)  LDD1621  [24]
 LDCM0418  CL3 HEK-293T C44(0.98); C253(0.96)  LDD1622  [24]
 LDCM0419  CL30 HEK-293T C44(1.03); C253(0.93)  LDD1623  [24]
 LDCM0420  CL31 HEK-293T C44(1.03); C257(0.97); C337(0.95)  LDD1624  [24]
 LDCM0421  CL32 HEK-293T C44(1.08); C110(0.84); C253(0.88)  LDD1625  [24]
 LDCM0422  CL33 HEK-293T C44(0.97); C110(0.96); C257(0.89); C253(0.68)  LDD1626  [24]
 LDCM0423  CL34 HEK-293T C44(1.17); C110(1.02)  LDD1627  [24]
 LDCM0424  CL35 HEK-293T C44(1.23); C110(0.98); C253(0.66)  LDD1628  [24]
 LDCM0425  CL36 HEK-293T C44(1.11); C257(1.21); C253(1.08); C337(1.08)  LDD1629  [24]
 LDCM0426  CL37 HEK-293T C44(1.10); C110(1.11); C253(0.71); C337(0.95)  LDD1630  [24]
 LDCM0428  CL39 HEK-293T C44(1.08); C253(1.23)  LDD1632  [24]
 LDCM0429  CL4 HEK-293T C44(0.95)  LDD1633  [24]
 LDCM0430  CL40 HEK-293T C44(1.07)  LDD1634  [24]
 LDCM0431  CL41 HEK-293T C44(1.04); C110(1.16); C337(1.01)  LDD1635  [24]
 LDCM0432  CL42 HEK-293T C44(1.05); C253(0.84)  LDD1636  [24]
 LDCM0433  CL43 HEK-293T C44(1.17); C257(1.13); C337(0.89)  LDD1637  [24]
 LDCM0434  CL44 HEK-293T C44(1.15); C110(1.13); C253(0.90)  LDD1638  [24]
 LDCM0435  CL45 HEK-293T C44(1.10); C110(0.96); C257(0.82); C253(0.76)  LDD1639  [24]
 LDCM0436  CL46 HEK-293T C44(1.11); C110(1.03)  LDD1640  [24]
 LDCM0437  CL47 HEK-293T C44(1.17); C110(1.10); C253(1.00)  LDD1641  [24]
 LDCM0438  CL48 HEK-293T C44(1.12); C257(0.84); C253(0.95); C337(1.05)  LDD1642  [24]
 LDCM0439  CL49 HEK-293T C44(1.06); C110(1.47); C253(0.74); C337(0.95)  LDD1643  [24]
 LDCM0440  CL5 HEK-293T C44(0.98); C110(0.91); C337(1.01)  LDD1644  [24]
 LDCM0441  CL50 HEK-293T C44(1.05); C110(0.96); C253(0.82); C337(0.88)  LDD1645  [24]
 LDCM0443  CL52 HEK-293T C44(0.89)  LDD1646  [24]
 LDCM0444  CL53 HEK-293T C44(0.97); C110(1.62); C337(0.99)  LDD1647  [24]
 LDCM0445  CL54 HEK-293T C44(0.95); C253(0.84)  LDD1648  [24]
 LDCM0446  CL55 HEK-293T C44(1.14); C257(1.02); C337(1.11)  LDD1649  [24]
 LDCM0447  CL56 HEK-293T C44(1.13); C110(0.66); C253(0.97)  LDD1650  [24]
 LDCM0448  CL57 HEK-293T C44(1.03); C110(0.89); C257(0.96); C253(0.77)  LDD1651  [24]
 LDCM0449  CL58 HEK-293T C44(1.14); C110(1.15)  LDD1652  [24]
 LDCM0450  CL59 HEK-293T C44(1.18); C110(0.82); C253(0.84)  LDD1653  [24]
 LDCM0451  CL6 HEK-293T C44(1.02); C253(0.84)  LDD1654  [24]
 LDCM0452  CL60 HEK-293T C44(1.14); C257(1.19); C253(0.98); C337(1.23)  LDD1655  [24]
 LDCM0453  CL61 HEK-293T C44(1.02); C110(1.16); C253(0.72); C337(1.06)  LDD1656  [24]
 LDCM0454  CL62 HEK-293T C44(1.13); C110(0.94); C253(0.88); C337(0.92)  LDD1657  [24]
 LDCM0455  CL63 HEK-293T C44(1.10); C253(1.13)  LDD1658  [24]
 LDCM0456  CL64 HEK-293T C44(1.00)  LDD1659  [24]
 LDCM0457  CL65 HEK-293T C44(1.04); C110(0.85); C337(0.94)  LDD1660  [24]
 LDCM0458  CL66 HEK-293T C44(1.07); C253(0.90)  LDD1661  [24]
 LDCM0459  CL67 HEK-293T C44(1.16); C257(0.98); C337(0.90)  LDD1662  [24]
 LDCM0460  CL68 HEK-293T C44(1.14); C110(0.81); C253(0.88)  LDD1663  [24]
 LDCM0461  CL69 HEK-293T C44(1.12); C110(1.03); C257(0.90); C253(0.68)  LDD1664  [24]
 LDCM0462  CL7 HEK-293T C44(1.05); C257(0.95); C337(1.01)  LDD1665  [24]
 LDCM0463  CL70 HEK-293T C44(1.13); C110(1.05)  LDD1666  [24]
 LDCM0464  CL71 HEK-293T C44(1.19); C110(1.22); C253(0.79)  LDD1667  [24]
 LDCM0465  CL72 HEK-293T C44(1.06); C257(1.18); C253(0.89); C337(1.16)  LDD1668  [24]
 LDCM0466  CL73 HEK-293T C44(1.07); C110(0.99); C253(0.72); C337(1.06)  LDD1669  [24]
 LDCM0467  CL74 HEK-293T C44(1.13); C110(0.75); C253(0.75); C337(1.02)  LDD1670  [24]
 LDCM0469  CL76 HEK-293T C44(1.01)  LDD1672  [24]
 LDCM0470  CL77 HEK-293T C44(0.97); C110(0.69); C337(0.94)  LDD1673  [24]
 LDCM0471  CL78 HEK-293T C44(1.10); C253(0.95)  LDD1674  [24]
 LDCM0472  CL79 HEK-293T C44(1.10); C257(0.92); C337(0.92)  LDD1675  [24]
 LDCM0473  CL8 HEK-293T C44(1.08); C110(0.72); C253(0.66)  LDD1676  [24]
 LDCM0474  CL80 HEK-293T C44(1.17); C110(0.95); C253(0.94)  LDD1677  [24]
 LDCM0475  CL81 HEK-293T C44(1.07); C110(1.05); C257(1.21); C253(0.66)  LDD1678  [24]
 LDCM0476  CL82 HEK-293T C44(1.14); C110(1.18)  LDD1679  [24]
 LDCM0477  CL83 HEK-293T C44(1.15); C110(0.84); C253(0.78)  LDD1680  [24]
 LDCM0478  CL84 HEK-293T C44(1.10); C257(1.03); C253(0.90); C337(1.17)  LDD1681  [24]
 LDCM0479  CL85 HEK-293T C44(1.01); C110(1.13); C253(0.58); C337(0.99)  LDD1682  [24]
 LDCM0480  CL86 HEK-293T C44(1.02); C110(0.72); C253(0.46); C337(0.84)  LDD1683  [24]
 LDCM0481  CL87 HEK-293T C44(1.03); C253(0.58)  LDD1684  [24]
 LDCM0482  CL88 HEK-293T C44(1.08)  LDD1685  [24]
 LDCM0483  CL89 HEK-293T C44(1.07); C110(1.12); C337(1.12)  LDD1686  [24]
 LDCM0484  CL9 HEK-293T C44(1.08); C110(1.03); C257(1.09); C253(0.89)  LDD1687  [24]
 LDCM0485  CL90 HEK-293T C44(1.00); C253(0.68)  LDD1688  [24]
 LDCM0486  CL91 HEK-293T C44(1.15); C257(0.83); C337(1.04)  LDD1689  [24]
 LDCM0487  CL92 HEK-293T C44(1.03); C110(1.18); C253(0.83)  LDD1690  [24]
 LDCM0488  CL93 HEK-293T C44(1.04); C110(1.15); C257(1.13); C253(0.62)  LDD1691  [24]
 LDCM0489  CL94 HEK-293T C44(1.07); C110(0.94)  LDD1692  [24]
 LDCM0490  CL95 HEK-293T C44(0.93); C110(0.59); C253(0.68)  LDD1693  [24]
 LDCM0491  CL96 HEK-293T C44(1.02); C257(0.69); C253(0.57); C337(1.08)  LDD1694  [24]
 LDCM0492  CL97 HEK-293T C44(0.98); C110(1.52); C253(0.82); C337(1.06)  LDD1695  [24]
 LDCM0493  CL98 HEK-293T C44(1.04); C110(1.07); C253(1.20); C337(0.91)  LDD1696  [24]
 LDCM0494  CL99 HEK-293T C44(1.07); C253(0.88)  LDD1697  [24]
 LDCM0495  E2913 HEK-293T C44(1.09); C253(0.95)  LDD1698  [24]
 LDCM0625  F8 Ramos C44(0.77)  LDD2187  [25]
 LDCM0572  Fragment10 Ramos C44(0.55)  LDD2189  [25]
 LDCM0574  Fragment12 Ramos C44(0.62)  LDD2191  [25]
 LDCM0575  Fragment13 Ramos C44(0.97)  LDD2192  [25]
 LDCM0576  Fragment14 Ramos C44(0.67)  LDD2193  [25]
 LDCM0579  Fragment20 Ramos C44(0.44)  LDD2194  [25]
 LDCM0580  Fragment21 Ramos C44(0.78)  LDD2195  [25]
 LDCM0582  Fragment23 Ramos C44(0.60)  LDD2196  [25]
 LDCM0578  Fragment27 Ramos C44(0.92)  LDD2197  [25]
 LDCM0586  Fragment28 Ramos C44(0.88)  LDD2198  [25]
 LDCM0588  Fragment30 Ramos C44(1.07)  LDD2199  [25]
 LDCM0589  Fragment31 Ramos C44(0.94)  LDD2200  [25]
 LDCM0590  Fragment32 Ramos C44(0.56)  LDD2201  [25]
 LDCM0468  Fragment33 HEK-293T C44(1.10); C253(0.96)  LDD1671  [24]
 LDCM0596  Fragment38 Ramos C44(0.78)  LDD2203  [25]
 LDCM0566  Fragment4 Ramos C44(0.66)  LDD2184  [25]
 LDCM0427  Fragment51 HEK-293T C44(1.05); C110(0.94); C253(0.82); C337(0.95)  LDD1631  [24]
 LDCM0610  Fragment52 Ramos C44(1.20)  LDD2204  [25]
 LDCM0614  Fragment56 Ramos C44(0.96)  LDD2205  [25]
 LDCM0616  Fragment61 Jurkat _(20.00)  LDD1489  [7]
 LDCM0569  Fragment7 Ramos C44(0.56)  LDD2186  [25]
 LDCM0571  Fragment9 Ramos C44(0.46)  LDD2188  [25]
 LDCM0107  IAA HeLa H247(0.00); C257(0.00)  LDD0221  [9]
 LDCM0022  KB02 HEK-293T C44(1.04); C257(1.10)  LDD1492  [24]
 LDCM0023  KB03 Jurkat C337(105.23)  LDD0209  [8]
 LDCM0024  KB05 COLO792 C44(1.19)  LDD3310  [26]
 LDCM0109  NEM HeLa N.A.  LDD0223  [9]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C336(1.32)  LDD2125  [6]
 LDCM0534  Nucleophilic fragment 30a MDA-MB-231 C336(0.85)  LDD2127  [6]
 LDCM0536  Nucleophilic fragment 31 MDA-MB-231 C257(0.43)  LDD2129  [6]
 LDCM0542  Nucleophilic fragment 37 MDA-MB-231 C257(0.78)  LDD2135  [6]
 LDCM0552  Nucleophilic fragment 6a MDA-MB-231 C257(0.75)  LDD2146  [6]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Other
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Double-stranded RNA-binding protein Staufen homolog 1 (STAU1) . O95793

References

1 2-Ethynylbenzaldehyde-Based, Lysine-Targeting Irreversible Covalent Inhibitors for Protein Kinases and Nonkinases. J Am Chem Soc. 2023 Feb 12. doi: 10.1021/jacs.2c11595. Online ahead of print.
Mass spectrometry data entry: PXD037665
2 Chemoproteomic profiling of kinases in live cells using electrophilic sulfonyl triazole probes. Chem Sci. 2021 Jan 21;12(9):3295-3307. doi: 10.1039/d0sc06623k.
3 Ynamide Electrophile for the Profiling of Ligandable Carboxyl Residues in Live Cells and the Development of New Covalent Inhibitors. J Med Chem. 2022 Aug 11;65(15):10408-10418. doi: 10.1021/acs.jmedchem.2c00272. Epub 2022 Jul 26.
4 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
5 Oxidant-Induced Bioconjugation for Protein Labeling in Live Cells. ACS Chem Biol. 2023 Jan 20;18(1):112-122. doi: 10.1021/acschembio.2c00740. Epub 2022 Dec 21.
6 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
7 Proteome-wide covalent ligand discovery in native biological systems. Nature. 2016 Jun 23;534(7608):570-4. doi: 10.1038/nature18002. Epub 2016 Jun 15.
8 Covalent Inhibition by a Natural Product-Inspired Latent Electrophile. J Am Chem Soc. 2023 May 24;145(20):11097-11109. doi: 10.1021/jacs.3c00598. Epub 2023 May 15.
9 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
10 Global profiling of functional histidines in live cells using small-molecule photosensitizer and chemical probe relay labelling. Nat Chem. 2024 Jun 4. doi: 10.1038/s41557-024-01545-6. Online ahead of print.
Mass spectrometry data entry: PXD042377
11 Targeted Proteomic Approaches for Proteome-Wide Characterizations of the AMP-Binding Capacities of Kinases. J Proteome Res. 2022 Aug 5;21(8):2063-2070. doi: 10.1021/acs.jproteome.2c00225. Epub 2022 Jul 12.
12 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
13 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
14 Tunable Amine-Reactive Electrophiles for Selective Profiling of Lysine. Angew Chem Int Ed Engl. 2022 Jan 26;61(5):e202112107. doi: 10.1002/anie.202112107. Epub 2021 Dec 16.
15 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
16 Solid Phase Synthesis of Fluorosulfate Containing Macrocycles for Chemoproteomic Workflows. bioRxiv [Preprint]. 2023 Feb 18:2023.02.17.529022. doi: 10.1101/2023.02.17.529022.
Mass spectrometry data entry: PXD039931
17 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
18 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
19 Ligand and Target Discovery by Fragment-Based Screening in Human Cells. Cell. 2017 Jan 26;168(3):527-541.e29. doi: 10.1016/j.cell.2016.12.029. Epub 2017 Jan 19.
20 Design and synthesis of minimalist terminal alkyne-containing diazirine photo-crosslinkers and their incorporation into kinase inhibitors for cell- and tissue-based proteome profiling. Angew Chem Int Ed Engl. 2013 Aug 12;52(33):8551-6. doi: 10.1002/anie.201300683. Epub 2013 Jun 10.
21 Pharmacological Targeting of Vacuolar H(+)-ATPase via Subunit V1G Combats Multidrug-Resistant Cancer. Cell Chem Biol. 2020 Nov 19;27(11):1359-1370.e8. doi: 10.1016/j.chembiol.2020.06.011. Epub 2020 Jul 9.
22 Cell-based proteome profiling of potential dasatinib targets by use of affinity-based probes. J Am Chem Soc. 2012 Feb 15;134(6):3001-14. doi: 10.1021/ja208518u. Epub 2012 Feb 1.
23 Proteome profiling reveals potential cellular targets of staurosporine using a clickable cell-permeable probe. Chem Commun (Camb). 2011 Oct 28;47(40):11306-8. doi: 10.1039/c1cc14824a. Epub 2011 Sep 16.
24 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
25 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
26 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840