Details of the Target

General Information of Target

Target ID LDTP01675
Target Name Antiviral innate immune response receptor RIG-I (RIGI)
Gene Name RIGI
Gene ID 23586
Synonyms
DDX58; Antiviral innate immune response receptor RIG-I; ATP-dependent RNA helicase DDX58; EC 3.6.4.13; DEAD box protein 58; RIG-I-like receptor 1; RLR-1; RNA sensor RIG-I; Retinoic acid-inducible gene 1 protein; RIG-1; Retinoic acid-inducible gene I protein; RIG-I
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
KFSELWIVEKGIKDVETEDLEDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNLYSP
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN
VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
VQTLYSKWKDFHFEKIPFDPAEMSK
Target Type
Clinical trial
Target Bioclass
Enzyme
Family
Helicase family, RLR subfamily
Subcellular location
Cytoplasm
Function
Innate immune receptor that senses cytoplasmic viral nucleic acids and activates a downstream signaling cascade leading to the production of type I interferons and pro-inflammatory cytokines. Forms a ribonucleoprotein complex with viral RNAs on which it homooligomerizes to form filaments. The homooligomerization allows the recruitment of RNF135 an E3 ubiquitin-protein ligase that activates and amplifies the RIG-I-mediated antiviral signaling in an RNA length-dependent manner through ubiquitination-dependent and -independent mechanisms. Upon activation, associates with mitochondria antiviral signaling protein (MAVS/IPS1) that activates the IKK-related kinases TBK1 and IKBKE which in turn phosphorylate the interferon regulatory factors IRF3 and IRF7, activating transcription of antiviral immunological genes including the IFN-alpha and IFN-beta interferons. Ligands include 5'-triphosphorylated ssRNAs and dsRNAs but also short dsRNAs (<1 kb in length). In addition to the 5'-triphosphate moiety, blunt-end base pairing at the 5'-end of the RNA is very essential. Overhangs at the non-triphosphorylated end of the dsRNA RNA have no major impact on its activity. A 3'overhang at the 5'triphosphate end decreases and any 5'overhang at the 5' triphosphate end abolishes its activity. Detects both positive and negative strand RNA viruses including members of the families Paramyxoviridae: Human respiratory syncytial virus and measles virus (MeV), Rhabdoviridae: vesicular stomatitis virus (VSV), Orthomyxoviridae: influenza A and B virus, Flaviviridae: Japanese encephalitis virus (JEV), hepatitis C virus (HCV), dengue virus (DENV) and west Nile virus (WNV). It also detects rotaviruses and reoviruses. Detects and binds to SARS-CoV-2 RNAs which is inhibited by m6A RNA modifications (Ref.69). Also involved in antiviral signaling in response to viruses containing a dsDNA genome such as Epstein-Barr virus (EBV). Detects dsRNA produced from non-self dsDNA by RNA polymerase III, such as Epstein-Barr virus-encoded RNAs (EBERs). May play important roles in granulocyte production and differentiation, bacterial phagocytosis and in the regulation of cell migration. {|Ref.69}.
TTD ID
T29339
Uniprot ID
O95786
DrugMap ID
TTVB0O3
Ensemble ID
ENST00000379868.6
HGNC ID
HGNC:19102

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
A2058 SNV: p.G84R .
CAL33 SNV: p.P917S DBIA    Probe Info 
HKGZCC SNV: p.N650D DBIA    Probe Info 
IGROV1 SNV: p.E304A DBIA    Probe Info 
LNCaP clone FGC SNV: p.L540S .
MEWO SNV: p.K536Ter .
MFE319 Deletion: p.S654IfsTer3 .
MOLT4 Deletion: p.N645IfsTer12 IA-alkyne    Probe Info 
NCIH2172 Deletion: p.K290_G291delinsR
Insertion: p.K290IfsTer58		 DBIA    Probe Info 
NCIH2286 SNV: p.C268F; p.A774E .
OVK18 Insertion: p.A297CfsTer8 DBIA    Probe Info 

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 14 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info  		14.58  LDD0402  [1]
CY4
 Probe Info  		100.00  LDD0244  [2]
N1
 Probe Info  		100.00  LDD0242  [2]
STPyne
 Probe Info  		K115(2.18); K172(5.56); K177(8.53); K181(5.88)  LDD0277  [3]
ONAyne
 Probe Info  		K177(8.85)  LDD0275  [3]
P21
 Probe Info  		426.84  LDD0408  [4]
BTD
 Probe Info  		C738(0.84)  LDD2116  [5]
IPM
 Probe Info  		C841(8.82); C829(2.42); C263(1.13); C158(0.28)  LDD1701  [5]
DBIA
 Probe Info  		C680(1.01)  LDD0078  [6]
4-Iodoacetamidophenylacetylene
 Probe Info  		C738(0.00); C680(0.00); C428(0.00); C158(0.00)  LDD0038  [7]
IA-alkyne
 Probe Info  		C680(0.00); C158(0.00)  LDD0036  [7]
Lodoacetamide azide
 Probe Info  		C680(0.00); C158(0.00); C818(0.00); C738(0.00)  LDD0037  [7]
NAIA_4
 Probe Info  		C490(0.00); C829(0.00)  LDD2226  [8]
WYneN
 Probe Info  		N.A.  LDD0021  [9]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0214  AC1 HCT 116 C263(0.98); C268(1.01); C680(1.06)  LDD0531  [6]
 LDCM0215  AC10 HCT 116 C263(1.26); C268(1.26); C680(1.04)  LDD0532  [6]
 LDCM0216  AC100 HCT 116 C263(0.82); C268(0.82); C680(1.24)  LDD0533  [6]
 LDCM0217  AC101 HCT 116 C263(0.79); C268(0.79); C680(1.24)  LDD0534  [6]
 LDCM0218  AC102 HCT 116 C263(0.84); C268(0.84); C680(1.09)  LDD0535  [6]
 LDCM0219  AC103 HCT 116 C263(0.77); C268(0.77); C680(1.24)  LDD0536  [6]
 LDCM0220  AC104 HCT 116 C263(0.89); C268(0.89); C680(1.00)  LDD0537  [6]
 LDCM0221  AC105 HCT 116 C263(0.77); C268(0.77); C680(1.18)  LDD0538  [6]
 LDCM0222  AC106 HCT 116 C263(0.71); C268(0.71); C680(1.30)  LDD0539  [6]
 LDCM0223  AC107 HCT 116 C263(0.80); C268(0.80); C680(1.22)  LDD0540  [6]
 LDCM0224  AC108 HCT 116 C263(0.85); C268(0.85); C680(1.24)  LDD0541  [6]
 LDCM0225  AC109 HCT 116 C263(1.35); C268(1.35); C680(1.01)  LDD0542  [6]
 LDCM0226  AC11 HCT 116 C263(0.90); C268(0.90); C680(1.02)  LDD0543  [6]
 LDCM0227  AC110 HCT 116 C263(0.84); C268(0.84); C680(1.24)  LDD0544  [6]
 LDCM0228  AC111 HCT 116 C263(0.87); C268(0.87); C680(1.26)  LDD0545  [6]
 LDCM0229  AC112 HCT 116 C263(0.82); C268(0.82); C680(1.24)  LDD0546  [6]
 LDCM0230  AC113 HCT 116 C263(0.83); C268(0.81); C680(1.02)  LDD0547  [6]
 LDCM0231  AC114 HCT 116 C263(0.89); C268(0.93); C680(1.20)  LDD0548  [6]
 LDCM0232  AC115 HCT 116 C263(0.88); C268(1.05); C680(1.22)  LDD0549  [6]
 LDCM0233  AC116 HCT 116 C263(0.89); C268(0.97); C680(1.42)  LDD0550  [6]
 LDCM0234  AC117 HCT 116 C263(1.09); C268(1.05); C680(1.11)  LDD0551  [6]
 LDCM0235  AC118 HCT 116 C263(1.02); C268(1.15); C680(1.09)  LDD0552  [6]
 LDCM0236  AC119 HCT 116 C263(0.99); C268(1.05); C680(1.17)  LDD0553  [6]
 LDCM0237  AC12 HCT 116 C263(1.04); C268(1.04); C680(1.01)  LDD0554  [6]
 LDCM0238  AC120 HCT 116 C263(0.76); C268(0.76); C680(1.13)  LDD0555  [6]
 LDCM0239  AC121 HCT 116 C263(1.43); C268(1.15); C680(1.06)  LDD0556  [6]
 LDCM0240  AC122 HCT 116 C263(0.92); C268(0.90); C680(1.13)  LDD0557  [6]
 LDCM0241  AC123 HCT 116 C263(1.30); C268(0.95); C680(1.00)  LDD0558  [6]
 LDCM0242  AC124 HCT 116 C263(1.35); C268(1.10); C680(1.01)  LDD0559  [6]
 LDCM0243  AC125 HCT 116 C263(1.03); C268(1.00); C680(1.12)  LDD0560  [6]
 LDCM0244  AC126 HCT 116 C263(1.08); C268(0.97); C680(1.26)  LDD0561  [6]
 LDCM0245  AC127 HCT 116 C263(1.14); C268(1.18); C680(1.31)  LDD0562  [6]
 LDCM0246  AC128 HCT 116 C263(1.37); C268(1.37); C680(0.89)  LDD0563  [6]
 LDCM0247  AC129 HCT 116 C263(1.20); C268(1.20); C680(1.07)  LDD0564  [6]
 LDCM0249  AC130 HCT 116 C263(0.95); C268(0.95); C680(1.13)  LDD0566  [6]
 LDCM0250  AC131 HCT 116 C263(1.20); C268(1.20); C680(0.99)  LDD0567  [6]
 LDCM0251  AC132 HCT 116 C263(1.10); C268(1.10); C680(1.14)  LDD0568  [6]
 LDCM0252  AC133 HCT 116 C263(1.07); C268(1.07); C680(1.06)  LDD0569  [6]
 LDCM0253  AC134 HCT 116 C263(1.00); C268(1.00); C680(1.27)  LDD0570  [6]
 LDCM0254  AC135 HCT 116 C263(1.13); C268(1.13); C680(0.99)  LDD0571  [6]
 LDCM0255  AC136 HCT 116 C263(1.09); C268(1.09); C680(1.14)  LDD0572  [6]
 LDCM0256  AC137 HCT 116 C263(1.03); C268(1.03); C680(1.19)  LDD0573  [6]
 LDCM0257  AC138 HCT 116 C263(1.01); C268(1.01); C680(1.44)  LDD0574  [6]
 LDCM0258  AC139 HCT 116 C263(0.99); C268(0.99); C680(1.27)  LDD0575  [6]
 LDCM0259  AC14 HCT 116 C263(0.79); C268(0.79); C680(0.92)  LDD0576  [6]
 LDCM0260  AC140 HCT 116 C263(0.99); C268(0.99); C680(1.52)  LDD0577  [6]
 LDCM0261  AC141 HCT 116 C263(1.01); C268(1.01); C680(1.39)  LDD0578  [6]
 LDCM0262  AC142 HCT 116 C263(1.11); C268(1.11); C680(1.05)  LDD0579  [6]
 LDCM0263  AC143 HCT 116 C680(1.16)  LDD0580  [6]
 LDCM0264  AC144 HCT 116 C680(1.37)  LDD0581  [6]
 LDCM0265  AC145 HCT 116 C680(1.20)  LDD0582  [6]
 LDCM0266  AC146 HCT 116 C680(1.22)  LDD0583  [6]
 LDCM0267  AC147 HCT 116 C680(1.34)  LDD0584  [6]
 LDCM0268  AC148 HCT 116 C680(1.76)  LDD0585  [6]
 LDCM0269  AC149 HCT 116 C680(1.52)  LDD0586  [6]
 LDCM0270  AC15 HCT 116 C680(0.90); C263(1.06); C268(1.06)  LDD0587  [6]
 LDCM0271  AC150 HCT 116 C680(1.15)  LDD0588  [6]
 LDCM0272  AC151 HCT 116 C680(1.12)  LDD0589  [6]
 LDCM0273  AC152 HCT 116 C680(1.40)  LDD0590  [6]
 LDCM0274  AC153 HCT 116 C680(1.94)  LDD0591  [6]
 LDCM0621  AC154 HCT 116 C680(1.22)  LDD2158  [6]
 LDCM0622  AC155 HCT 116 C680(1.19)  LDD2159  [6]
 LDCM0623  AC156 HCT 116 C680(1.00)  LDD2160  [6]
 LDCM0624  AC157 HCT 116 C680(0.90)  LDD2161  [6]
 LDCM0276  AC17 HCT 116 C680(1.03); C268(1.13)  LDD0593  [6]
 LDCM0277  AC18 HCT 116 C268(1.03); C680(1.20)  LDD0594  [6]
 LDCM0278  AC19 HCT 116 C680(1.00); C268(1.09)  LDD0595  [6]
 LDCM0279  AC2 HCT 116 C263(0.96); C680(1.08); C268(1.10)  LDD0596  [6]
 LDCM0280  AC20 HCT 116 C680(0.98); C268(1.09)  LDD0597  [6]
 LDCM0281  AC21 HCT 116 C268(0.95); C680(0.99)  LDD0598  [6]
 LDCM0282  AC22 HCT 116 C680(0.97); C268(1.10)  LDD0599  [6]
 LDCM0283  AC23 HCT 116 C268(0.89); C680(1.03)  LDD0600  [6]
 LDCM0284  AC24 HCT 116 C680(0.93); C268(1.09)  LDD0601  [6]
 LDCM0285  AC25 HCT 116 C268(0.88); C680(1.06); C263(1.20)  LDD0602  [6]
 LDCM0286  AC26 HCT 116 C268(0.84); C263(1.09); C680(1.17)  LDD0603  [6]
 LDCM0287  AC27 HCT 116 C268(0.90); C263(1.05); C680(1.19)  LDD0604  [6]
 LDCM0288  AC28 HCT 116 C268(0.85); C263(1.18); C680(1.24)  LDD0605  [6]
 LDCM0289  AC29 HCT 116 C268(0.87); C263(0.88); C680(1.26)  LDD0606  [6]
 LDCM0290  AC3 HCT 116 C263(1.01); C680(1.04); C268(1.06)  LDD0607  [6]
 LDCM0291  AC30 HCT 116 C268(0.85); C263(0.96); C680(1.20)  LDD0608  [6]
 LDCM0292  AC31 HCT 116 C268(0.93); C263(1.13); C680(1.19)  LDD0609  [6]
 LDCM0293  AC32 HCT 116 C268(0.99); C263(1.02); C680(1.37)  LDD0610  [6]
 LDCM0294  AC33 HCT 116 C263(1.02); C268(1.02); C680(1.28)  LDD0611  [6]
 LDCM0295  AC34 HCT 116 C268(0.84); C263(1.10); C680(1.45)  LDD0612  [6]
 LDCM0296  AC35 HCT 116 C680(0.98); C268(1.13); C263(1.15)  LDD0613  [6]
 LDCM0297  AC36 HCT 116 C263(0.93); C268(0.97); C680(1.09)  LDD0614  [6]
 LDCM0298  AC37 HCT 116 C268(0.86); C263(0.94); C680(1.08)  LDD0615  [6]
 LDCM0299  AC38 HCT 116 C263(0.85); C268(0.91); C680(1.05)  LDD0616  [6]
 LDCM0300  AC39 HCT 116 C263(1.00); C268(1.01); C680(1.18)  LDD0617  [6]
 LDCM0301  AC4 HCT 116 C263(0.89); C268(0.95); C680(1.15)  LDD0618  [6]
 LDCM0302  AC40 HCT 116 C263(0.84); C268(0.86); C680(1.28)  LDD0619  [6]
 LDCM0303  AC41 HCT 116 C263(0.82); C268(0.85); C680(1.17)  LDD0620  [6]
 LDCM0304  AC42 HCT 116 C263(0.93); C268(0.98); C680(1.23)  LDD0621  [6]
 LDCM0305  AC43 HCT 116 C263(0.92); C268(0.97); C680(1.11)  LDD0622  [6]
 LDCM0306  AC44 HCT 116 C268(0.93); C263(0.99); C680(1.22)  LDD0623  [6]
 LDCM0307  AC45 HCT 116 C268(0.84); C263(0.89); C680(1.33)  LDD0624  [6]
 LDCM0308  AC46 HCT 116 C263(0.88); C268(0.88); C680(1.10)  LDD0625  [6]
 LDCM0309  AC47 HCT 116 C263(0.99); C268(0.99); C680(1.03)  LDD0626  [6]
 LDCM0310  AC48 HCT 116 C263(0.94); C268(0.94); C680(1.06)  LDD0627  [6]
 LDCM0311  AC49 HCT 116 C263(0.80); C268(0.80); C680(1.26)  LDD0628  [6]
 LDCM0312  AC5 HCT 116 C263(0.91); C268(1.01); C680(1.12)  LDD0629  [6]
 LDCM0313  AC50 HCT 116 C263(0.77); C268(0.77); C680(1.20)  LDD0630  [6]
 LDCM0314  AC51 HCT 116 C263(0.91); C268(0.91); C680(1.06)  LDD0631  [6]
 LDCM0315  AC52 HCT 116 C263(0.74); C268(0.74); C680(1.06)  LDD0632  [6]
 LDCM0316  AC53 HCT 116 C263(1.02); C268(1.02); C680(1.26)  LDD0633  [6]
 LDCM0317  AC54 HCT 116 C263(0.80); C268(0.80); C680(1.03)  LDD0634  [6]
 LDCM0318  AC55 HCT 116 C263(0.84); C268(0.84); C680(1.17)  LDD0635  [6]
 LDCM0319  AC56 HCT 116 C263(0.94); C268(0.94); C680(1.39)  LDD0636  [6]
 LDCM0320  AC57 HCT 116 C263(1.04); C268(1.04); C680(1.49)  LDD0637  [6]
 LDCM0321  AC58 HCT 116 C263(1.07); C268(1.07); C680(1.43)  LDD0638  [6]
 LDCM0322  AC59 HCT 116 C263(0.77); C268(0.77); C680(1.61)  LDD0639  [6]
 LDCM0323  AC6 HCT 116 C263(0.94); C268(0.94); C680(1.07)  LDD0640  [6]
 LDCM0324  AC60 HCT 116 C263(0.70); C268(0.70); C680(1.53)  LDD0641  [6]
 LDCM0325  AC61 HCT 116 C263(1.13); C268(1.13); C680(1.41)  LDD0642  [6]
 LDCM0326  AC62 HCT 116 C263(0.85); C268(0.85); C680(1.66)  LDD0643  [6]
 LDCM0327  AC63 HCT 116 C263(0.81); C268(0.81); C680(1.50)  LDD0644  [6]
 LDCM0328  AC64 HCT 116 C263(0.77); C268(0.77); C680(1.61)  LDD0645  [6]
 LDCM0329  AC65 HCT 116 C263(0.89); C268(0.89); C680(1.83)  LDD0646  [6]
 LDCM0330  AC66 HCT 116 C263(1.02); C268(1.02); C680(1.68)  LDD0647  [6]
 LDCM0331  AC67 HCT 116 C263(0.80); C268(0.80); C680(1.95)  LDD0648  [6]
 LDCM0332  AC68 HCT 116 C263(0.93); C268(0.93); C680(0.98)  LDD0649  [6]
 LDCM0333  AC69 HCT 116 C263(0.90); C268(0.90); C680(1.07)  LDD0650  [6]
 LDCM0334  AC7 HCT 116 C263(1.05); C268(1.05); C680(1.08)  LDD0651  [6]
 LDCM0335  AC70 HCT 116 C263(0.80); C268(0.80); C680(1.09)  LDD0652  [6]
 LDCM0336  AC71 HCT 116 C680(0.95); C263(1.24); C268(1.24)  LDD0653  [6]
 LDCM0337  AC72 HCT 116 C263(0.85); C268(0.85); C680(1.03)  LDD0654  [6]
 LDCM0338  AC73 HCT 116 C263(0.89); C268(0.89); C680(1.36)  LDD0655  [6]
 LDCM0339  AC74 HCT 116 C263(1.00); C268(1.00); C680(1.22)  LDD0656  [6]
 LDCM0340  AC75 HCT 116 C263(0.83); C268(0.83); C680(1.38)  LDD0657  [6]
 LDCM0341  AC76 HCT 116 C263(0.81); C268(0.81); C680(1.08)  LDD0658  [6]
 LDCM0342  AC77 HCT 116 C263(0.98); C268(0.98); C680(1.17)  LDD0659  [6]
 LDCM0343  AC78 HCT 116 C680(1.00); C263(1.00); C268(1.00)  LDD0660  [6]
 LDCM0344  AC79 HCT 116 C263(0.97); C268(0.97); C680(1.05)  LDD0661  [6]
 LDCM0345  AC8 HCT 116 C263(0.95); C268(0.95); C680(1.00)  LDD0662  [6]
 LDCM0346  AC80 HCT 116 C263(0.90); C268(0.90); C680(1.00)  LDD0663  [6]
 LDCM0347  AC81 HCT 116 C680(0.92); C263(1.00); C268(1.00)  LDD0664  [6]
 LDCM0348  AC82 HCT 116 C263(1.00); C268(1.00); C680(1.29)  LDD0665  [6]
 LDCM0349  AC83 HCT 116 C263(0.58); C268(0.58); C680(1.64)  LDD0666  [6]
 LDCM0350  AC84 HCT 116 C263(0.59); C268(0.59); C680(1.44)  LDD0667  [6]
 LDCM0351  AC85 HCT 116 C263(0.69); C268(0.69); C680(1.33)  LDD0668  [6]
 LDCM0352  AC86 HCT 116 C263(0.84); C268(0.84); C680(1.28)  LDD0669  [6]
 LDCM0353  AC87 HCT 116 C263(0.87); C268(0.87); C680(1.14)  LDD0670  [6]
 LDCM0354  AC88 HCT 116 C263(0.89); C268(0.89); C680(1.18)  LDD0671  [6]
 LDCM0355  AC89 HCT 116 C263(0.68); C268(0.68); C680(1.29)  LDD0672  [6]
 LDCM0357  AC90 HCT 116 C680(1.14); C263(1.32); C268(1.32)  LDD0674  [6]
 LDCM0358  AC91 HCT 116 C263(0.72); C268(0.72); C680(1.50)  LDD0675  [6]
 LDCM0359  AC92 HCT 116 C263(0.64); C268(0.64); C680(1.49)  LDD0676  [6]
 LDCM0360  AC93 HCT 116 C263(0.71); C268(0.71); C680(1.25)  LDD0677  [6]
 LDCM0361  AC94 HCT 116 C263(0.98); C268(0.98); C680(1.23)  LDD0678  [6]
 LDCM0362  AC95 HCT 116 C263(0.80); C268(0.80); C680(1.22)  LDD0679  [6]
 LDCM0363  AC96 HCT 116 C263(0.90); C268(0.90); C680(1.31)  LDD0680  [6]
 LDCM0364  AC97 HCT 116 C263(0.61); C268(0.61); C680(1.50)  LDD0681  [6]
 LDCM0365  AC98 HCT 116 C263(0.70); C268(0.70); C680(1.35)  LDD0682  [6]
 LDCM0366  AC99 HCT 116 C263(0.87); C268(0.87); C680(1.22)  LDD0683  [6]
 LDCM0248  AKOS034007472 HCT 116 C263(0.95); C268(0.95); C680(1.00)  LDD0565  [6]
 LDCM0356  AKOS034007680 HCT 116 C263(0.91); C268(0.91); C680(1.01)  LDD0673  [6]
 LDCM0275  AKOS034007705 HCT 116 C263(0.94); C268(0.94); C680(0.99)  LDD0592  [6]
 LDCM0156  Aniline NCI-H1299 11.80  LDD0403  [1]
 LDCM0020  ARS-1620 HCC44 C680(1.01)  LDD0078  [6]
 LDCM0367  CL1 HCT 116 C268(0.89); C263(0.98); C680(1.03)  LDD0684  [6]
 LDCM0368  CL10 HCT 116 C268(1.04); C263(1.06); C680(1.48)  LDD0685  [6]
 LDCM0369  CL100 HCT 116 C263(0.97); C268(1.05); C680(1.17)  LDD0686  [6]
 LDCM0370  CL101 HCT 116 C263(0.89); C268(0.89); C680(0.93)  LDD0687  [6]
 LDCM0371  CL102 HCT 116 C263(1.07); C268(1.07); C680(1.10)  LDD0688  [6]
 LDCM0372  CL103 HCT 116 C263(0.83); C268(0.83); C680(0.92)  LDD0689  [6]
 LDCM0373  CL104 HCT 116 C263(0.88); C268(0.88); C680(0.96)  LDD0690  [6]
 LDCM0374  CL105 HCT 116 C268(0.96); C680(1.15)  LDD0691  [6]
 LDCM0375  CL106 HCT 116 C268(0.83); C680(1.29)  LDD0692  [6]
 LDCM0376  CL107 HCT 116 C268(0.89); C680(1.20)  LDD0693  [6]
 LDCM0377  CL108 HCT 116 C268(0.90); C680(1.37)  LDD0694  [6]
 LDCM0378  CL109 HCT 116 C268(0.89); C680(1.13)  LDD0695  [6]
 LDCM0379  CL11 HCT 116 C263(1.16); C268(1.18); C680(1.37)  LDD0696  [6]
 LDCM0380  CL110 HCT 116 C268(1.05); C680(1.27)  LDD0697  [6]
 LDCM0381  CL111 HCT 116 C268(0.97); C680(1.21)  LDD0698  [6]
 LDCM0382  CL112 HCT 116 C268(0.86); C263(0.99); C680(1.18)  LDD0699  [6]
 LDCM0383  CL113 HCT 116 C263(0.93); C268(0.96); C680(1.33)  LDD0700  [6]
 LDCM0384  CL114 HCT 116 C263(0.88); C268(0.98); C680(1.36)  LDD0701  [6]
 LDCM0385  CL115 HCT 116 C268(0.87); C263(0.97); C680(1.28)  LDD0702  [6]
 LDCM0386  CL116 HCT 116 C268(0.91); C263(1.03); C680(1.22)  LDD0703  [6]
 LDCM0387  CL117 HCT 116 C263(0.94); C268(1.00); C680(1.29)  LDD0704  [6]
 LDCM0388  CL118 HCT 116 C263(0.88); C268(0.92); C680(1.08)  LDD0705  [6]
 LDCM0389  CL119 HCT 116 C263(0.99); C268(1.02); C680(1.14)  LDD0706  [6]
 LDCM0390  CL12 HCT 116 C263(1.08); C268(1.28); C680(1.37)  LDD0707  [6]
 LDCM0391  CL120 HCT 116 C263(0.90); C268(0.97); C680(1.14)  LDD0708  [6]
 LDCM0392  CL121 HCT 116 C680(1.03); C263(1.15); C268(1.15)  LDD0709  [6]
 LDCM0393  CL122 HCT 116 C263(0.89); C268(0.89); C680(1.10)  LDD0710  [6]
 LDCM0394  CL123 HCT 116 C263(0.76); C268(0.76); C680(1.37)  LDD0711  [6]
 LDCM0395  CL124 HCT 116 C263(0.75); C268(0.75); C680(1.24)  LDD0712  [6]
 LDCM0396  CL125 HCT 116 C263(0.79); C268(0.79); C680(1.21)  LDD0713  [6]
 LDCM0397  CL126 HCT 116 C263(0.83); C268(0.83); C680(1.18)  LDD0714  [6]
 LDCM0398  CL127 HCT 116 C263(0.80); C268(0.80); C680(1.18)  LDD0715  [6]
 LDCM0399  CL128 HCT 116 C263(1.05); C268(1.05); C680(1.43)  LDD0716  [6]
 LDCM0400  CL13 HCT 116 C263(0.94); C268(0.99); C680(1.13)  LDD0717  [6]
 LDCM0401  CL14 HCT 116 C263(0.96); C268(0.97); C680(1.15)  LDD0718  [6]
 LDCM0402  CL15 HCT 116 C268(1.03); C263(1.06); C680(1.28)  LDD0719  [6]
 LDCM0403  CL16 HCT 116 C263(0.85); C268(0.85); C680(1.00)  LDD0720  [6]
 LDCM0404  CL17 HCT 116 C680(1.08); C268(1.21); C263(1.28)  LDD0721  [6]
 LDCM0405  CL18 HCT 116 C263(0.94); C680(0.97); C268(1.04)  LDD0722  [6]
 LDCM0406  CL19 HCT 116 C680(0.97); C263(1.17); C268(1.18)  LDD0723  [6]
 LDCM0407  CL2 HCT 116 C263(0.84); C268(0.87); C680(0.99)  LDD0724  [6]
 LDCM0408  CL20 HCT 116 C263(1.04); C680(1.13); C268(1.27)  LDD0725  [6]
 LDCM0409  CL21 HCT 116 C263(1.08); C268(1.15); C680(1.28)  LDD0726  [6]
 LDCM0410  CL22 HCT 116 C263(0.83); C268(1.06); C680(1.32)  LDD0727  [6]
 LDCM0411  CL23 HCT 116 C268(0.87); C263(0.88); C680(1.06)  LDD0728  [6]
 LDCM0412  CL24 HCT 116 C263(0.81); C268(1.04); C680(1.15)  LDD0729  [6]
 LDCM0413  CL25 HCT 116 C263(0.77); C268(0.82); C680(1.14)  LDD0730  [6]
 LDCM0414  CL26 HCT 116 C263(0.64); C268(0.79); C680(1.02)  LDD0731  [6]
 LDCM0415  CL27 HCT 116 C263(1.05); C268(1.12); C680(1.02)  LDD0732  [6]
 LDCM0416  CL28 HCT 116 C263(0.83); C268(1.23); C680(1.13)  LDD0733  [6]
 LDCM0417  CL29 HCT 116 C263(1.12); C268(1.23); C680(1.09)  LDD0734  [6]
 LDCM0418  CL3 HCT 116 C263(0.95); C268(0.99); C680(0.98)  LDD0735  [6]
 LDCM0419  CL30 HCT 116 C263(0.86); C268(1.06); C680(0.95)  LDD0736  [6]
 LDCM0420  CL31 HCT 116 C263(1.10); C268(1.14); C680(1.14)  LDD0737  [6]
 LDCM0421  CL32 HCT 116 C263(0.88); C268(0.82); C680(1.17)  LDD0738  [6]
 LDCM0422  CL33 HCT 116 C263(0.97); C268(1.00); C680(1.58)  LDD0739  [6]
 LDCM0423  CL34 HCT 116 C263(0.89); C268(0.99); C680(1.33)  LDD0740  [6]
 LDCM0424  CL35 HCT 116 C263(0.80); C268(0.86); C680(1.28)  LDD0741  [6]
 LDCM0425  CL36 HCT 116 C263(1.02); C268(1.01); C680(1.21)  LDD0742  [6]
 LDCM0426  CL37 HCT 116 C263(0.90); C268(0.95); C680(1.33)  LDD0743  [6]
 LDCM0428  CL39 HCT 116 C263(0.99); C268(0.94); C680(1.41)  LDD0745  [6]
 LDCM0429  CL4 HCT 116 C263(0.94); C268(0.96); C680(1.08)  LDD0746  [6]
 LDCM0430  CL40 HCT 116 C263(0.96); C268(0.95); C680(1.45)  LDD0747  [6]
 LDCM0431  CL41 HCT 116 C263(0.88); C268(0.90); C680(1.22)  LDD0748  [6]
 LDCM0432  CL42 HCT 116 C263(0.87); C268(0.94); C680(1.70)  LDD0749  [6]
 LDCM0433  CL43 HCT 116 C263(0.96); C268(0.92); C680(1.36)  LDD0750  [6]
 LDCM0434  CL44 HCT 116 C263(0.96); C268(0.93); C680(1.30)  LDD0751  [6]
 LDCM0435  CL45 HCT 116 C263(0.97); C268(0.93); C680(1.43)  LDD0752  [6]
 LDCM0436  CL46 HCT 116 C263(1.22); C268(1.22); C680(0.92)  LDD0753  [6]
 LDCM0437  CL47 HCT 116 C263(1.11); C268(1.11); C680(0.91)  LDD0754  [6]
 LDCM0438  CL48 HCT 116 C263(1.08); C268(1.08); C680(0.88)  LDD0755  [6]
 LDCM0439  CL49 HCT 116 C263(0.96); C268(0.96); C680(0.94)  LDD0756  [6]
 LDCM0440  CL5 HCT 116 C263(1.09); C268(1.00); C680(1.03)  LDD0757  [6]
 LDCM0441  CL50 HCT 116 C263(1.23); C268(1.23); C680(0.92)  LDD0758  [6]
 LDCM0442  CL51 HCT 116 C263(1.10); C268(1.10); C680(0.93)  LDD0759  [6]
 LDCM0443  CL52 HCT 116 C263(1.14); C268(1.14); C680(0.97)  LDD0760  [6]
 LDCM0444  CL53 HCT 116 C263(1.26); C268(1.26); C680(0.94)  LDD0761  [6]
 LDCM0445  CL54 HCT 116 C263(1.15); C268(1.15); C680(0.88)  LDD0762  [6]
 LDCM0446  CL55 HCT 116 C263(1.30); C268(1.30); C680(0.87)  LDD0763  [6]
 LDCM0447  CL56 HCT 116 C263(1.02); C268(1.02); C680(0.98)  LDD0764  [6]
 LDCM0448  CL57 HCT 116 C263(1.16); C268(1.16); C680(0.91)  LDD0765  [6]
 LDCM0449  CL58 HCT 116 C263(1.12); C268(1.12); C680(0.86)  LDD0766  [6]
 LDCM0450  CL59 HCT 116 C263(1.03); C268(1.03); C680(0.95)  LDD0767  [6]
 LDCM0451  CL6 HCT 116 C263(0.93); C268(0.99); C680(1.19)  LDD0768  [6]
 LDCM0452  CL60 HCT 116 C263(1.00); C268(1.00); C680(0.97)  LDD0769  [6]
 LDCM0453  CL61 HCT 116 C263(0.84); C268(0.95); C680(1.22)  LDD0770  [6]
 LDCM0454  CL62 HCT 116 C263(0.77); C268(0.84); C680(1.25)  LDD0771  [6]
 LDCM0455  CL63 HCT 116 C263(0.67); C268(0.79); C680(1.39)  LDD0772  [6]
 LDCM0456  CL64 HCT 116 C263(0.62); C268(0.76); C680(1.41)  LDD0773  [6]
 LDCM0457  CL65 HCT 116 C263(0.75); C268(0.82); C680(1.17)  LDD0774  [6]
 LDCM0458  CL66 HCT 116 C263(0.38); C268(0.57); C680(1.46)  LDD0775  [6]
 LDCM0459  CL67 HCT 116 C263(0.45); C268(0.59); C680(1.24)  LDD0776  [6]
 LDCM0460  CL68 HCT 116 C263(0.64); C268(0.72); C680(1.26)  LDD0777  [6]
 LDCM0461  CL69 HCT 116 C263(0.59); C268(0.71); C680(1.33)  LDD0778  [6]
 LDCM0462  CL7 HCT 116 C263(1.00); C268(1.02); C680(1.20)  LDD0779  [6]
 LDCM0463  CL70 HCT 116 C263(0.63); C268(0.74); C680(1.18)  LDD0780  [6]
 LDCM0464  CL71 HCT 116 C263(0.69); C268(0.79); C680(1.42)  LDD0781  [6]
 LDCM0465  CL72 HCT 116 C263(0.88); C268(0.94); C680(1.18)  LDD0782  [6]
 LDCM0466  CL73 HCT 116 C263(0.65); C268(0.77); C680(1.31)  LDD0783  [6]
 LDCM0467  CL74 HCT 116 C263(0.58); C268(0.70); C680(1.24)  LDD0784  [6]
 LDCM0469  CL76 HCT 116 C263(0.85); C268(0.99); C680(1.08)  LDD0786  [6]
 LDCM0470  CL77 HCT 116 C263(0.83); C268(0.91); C680(1.08)  LDD0787  [6]
 LDCM0471  CL78 HCT 116 C263(0.93); C268(1.01); C680(1.11)  LDD0788  [6]
 LDCM0472  CL79 HCT 116 C263(0.77); C268(0.98); C680(1.19)  LDD0789  [6]
 LDCM0473  CL8 HCT 116 C263(1.06); C268(1.17); C680(1.80)  LDD0790  [6]
 LDCM0474  CL80 HCT 116 C263(0.84); C268(0.97); C680(1.05)  LDD0791  [6]
 LDCM0475  CL81 HCT 116 C263(0.89); C268(1.01); C680(1.34)  LDD0792  [6]
 LDCM0476  CL82 HCT 116 C263(0.97); C268(1.12); C680(1.22)  LDD0793  [6]
 LDCM0477  CL83 HCT 116 C263(0.97); C268(1.04); C680(1.23)  LDD0794  [6]
 LDCM0478  CL84 HCT 116 C263(0.81); C268(0.91); C680(1.42)  LDD0795  [6]
 LDCM0479  CL85 HCT 116 C263(0.82); C268(0.91); C680(1.24)  LDD0796  [6]
 LDCM0480  CL86 HCT 116 C263(0.91); C268(1.02); C680(1.10)  LDD0797  [6]
 LDCM0481  CL87 HCT 116 C263(0.91); C268(1.02); C680(1.13)  LDD0798  [6]
 LDCM0482  CL88 HCT 116 C263(0.88); C268(0.97); C680(1.15)  LDD0799  [6]
 LDCM0483  CL89 HCT 116 C263(0.96); C268(0.99); C680(1.45)  LDD0800  [6]
 LDCM0484  CL9 HCT 116 C263(0.77); C268(0.93); C680(1.20)  LDD0801  [6]
 LDCM0485  CL90 HCT 116 C263(1.16); C268(1.21); C680(1.37)  LDD0802  [6]
 LDCM0486  CL91 HCT 116 C263(0.82); C268(1.00); C680(1.10)  LDD0803  [6]
 LDCM0487  CL92 HCT 116 C263(0.80); C268(0.96); C680(1.16)  LDD0804  [6]
 LDCM0488  CL93 HCT 116 C263(0.88); C268(0.90); C680(1.02)  LDD0805  [6]
 LDCM0489  CL94 HCT 116 C263(0.97); C268(1.00); C680(1.27)  LDD0806  [6]
 LDCM0490  CL95 HCT 116 C263(0.77); C268(0.96); C680(1.28)  LDD0807  [6]
 LDCM0491  CL96 HCT 116 C263(0.87); C268(0.98); C680(1.12)  LDD0808  [6]
 LDCM0492  CL97 HCT 116 C263(0.90); C268(0.97); C680(1.07)  LDD0809  [6]
 LDCM0493  CL98 HCT 116 C263(0.81); C268(1.02); C680(1.22)  LDD0810  [6]
 LDCM0494  CL99 HCT 116 C263(0.89); C268(0.98); C680(1.15)  LDD0811  [6]
 LDCM0213  Electrophilic fragment 2 MDA-MB-231 C158(3.64); C841(1.96); C263(0.96)  LDD1702  [5]
 LDCM0625  F8 Ramos C680(0.60)  LDD2187  [10]
 LDCM0573  Fragment11 Ramos C680(2.36)  LDD2190  [10]
 LDCM0576  Fragment14 Ramos C680(2.55)  LDD2193  [10]
 LDCM0586  Fragment28 Ramos C680(1.41)  LDD2198  [10]
 LDCM0468  Fragment33 HCT 116 C263(0.67); C268(0.82); C680(1.29)  LDD0785  [6]
 LDCM0427  Fragment51 HCT 116 C263(1.01); C268(1.05); C680(1.67)  LDD0744  [6]
 LDCM0022  KB02 T cell C680(6.44)  LDD1703  [11]
 LDCM0023  KB03 Jurkat C428(10.89)  LDD0209  [12]
 LDCM0024  KB05 COLO792 C158(2.37); C869(1.70)  LDD3310  [13]
 LDCM0523  Nucleophilic fragment 24b MDA-MB-231 C738(0.84)  LDD2116  [5]
 LDCM0525  Nucleophilic fragment 25b MDA-MB-231 C738(0.60)  LDD2118  [5]
 LDCM0527  Nucleophilic fragment 26b MDA-MB-231 C738(0.80)  LDD2120  [5]
 LDCM0529  Nucleophilic fragment 27b MDA-MB-231 C738(0.36)  LDD2122  [5]
 LDCM0531  Nucleophilic fragment 28b MDA-MB-231 C738(0.46)  LDD2124  [5]
 LDCM0535  Nucleophilic fragment 30b MDA-MB-231 C841(0.55)  LDD2128  [5]
 LDCM0158  P27 BxPC-3 426.84  LDD0408  [4]
 LDCM0021  THZ1 HCT 116 C680(1.09)  LDD2173  [6]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 6 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
ATPase WRNIP1 (WRNIP1) AAA ATPase family Q96S55
ATP-dependent RNA helicase DDX3X (DDX3X) DEAD box helicase family O00571
Antiviral innate immune response receptor RIG-I (RIGI) Helicase family O95786
Ubiquitin carboxyl-terminal hydrolase CYLD (CYLD) Peptidase C19 family Q9NQC7
E3 ubiquitin-protein ligase RNF125 (RNF125) . Q96EQ8
E3 ubiquitin/ISG15 ligase TRIM25 (TRIM25) . Q14258
Transporter and channel
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Stimulator of interferon genes protein (STING1) STING family Q86WV6
Transcription factor
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Signal transducer and activator of transcription 1-alpha/beta (STAT1) Transcription factor STAT family P42224
Other
Click To Hide/Show 5 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Zinc finger CCCH-type antiviral protein 1 (ZC3HAV1) ARTD/PARP family Q7Z2W4
Autophagy protein 5 (ATG5) ATG5 family Q9H1Y0
Ribosome biogenesis protein NOP53 (NOP53) NOP53 family Q9NZM5
Interferon-inducible double-stranded RNA-dependent protein kinase activator A (PRKRA) PRKRA family O75569
Mitochondrial antiviral-signaling protein (MAVS) . Q7Z434

References

1 Quantitative and Site-Specific Chemoproteomic Profiling of Targets of Acrolein. Chem Res Toxicol. 2019 Mar 18;32(3):467-473. doi: 10.1021/acs.chemrestox.8b00343. Epub 2019 Jan 15.
2 Cyclopropenone, Cyclopropeniminium Ion, and Cyclopropenethione as Novel Electrophilic Warheads for Potential Target Discovery of Triple-Negative Breast Cancer. J Med Chem. 2023 Feb 23;66(4):2851-2864. doi: 10.1021/acs.jmedchem.2c01889. Epub 2023 Feb 10.
3 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
4 Integrated phenotypic screening and activity-based protein profiling to reveal potential therapy targets of pancreatic cancer. Chem Commun (Camb). 2019 Jan 31;55(11):1596-1599. doi: 10.1039/c8cc08753a.
5 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
6 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
7 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
8 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
9 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
10 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
11 An Activity-Guided Map of Electrophile-Cysteine Interactions in Primary Human T Cells. Cell. 2020 Aug 20;182(4):1009-1026.e29. doi: 10.1016/j.cell.2020.07.001. Epub 2020 Jul 29.
12 Covalent Inhibition by a Natural Product-Inspired Latent Electrophile. J Am Chem Soc. 2023 May 24;145(20):11097-11109. doi: 10.1021/jacs.3c00598. Epub 2023 May 15.
13 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840