Details of the Target

General Information of Target

Target ID LDTP07499
Target Name Mitochondrial mRNA pseudouridine synthase RPUSD3 (RPUSD3)
Gene Name RPUSD3
Gene ID 285367
Synonyms
Mitochondrial mRNA pseudouridine synthase RPUSD3; EC 5.4.99.-; RNA pseudouridylate synthase domain-containing protein 3
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MRAVLAREMDGRRVLGRFWSGWRRGLGVRPVPEDAGFGTEARHQRQPRGSCQRSGPLGDQ
PFAGLLPKNLSREELVDALRAAVVDRKGPLVTLNKPQGLPVTGKPGELTLFSVLPELSQS
LGLREQELQVVRASGKESSGLVLLSSCPQTASRLQKYFTHARRAQRPTATYCAVTDGIPA
ASEGKIQAALKLEHIDGVNLTVPVKAPSRKDILEGVKKTLSHFRVVATGSGCALVQLQPL
TVFSSQLQVHMVLQLCPVLGDHMYSARVGTVLGQRFLLPAENNKPQRQVLDEALLRRLHL
TPSQAAQLPLHLHLHRLLLPGTRARDTPVELLAPLPPYFSRTLQCLGLRLQ
Target Bioclass
Enzyme
Family
Pseudouridine synthase RluA family
Subcellular location
Mitochondrion matrix
Function
Catalyzes uridine to pseudouridine isomerization (pseudouridylation) of specific mitochondrial mRNAs (mt-mRNAs), a post-transcriptional modification necessary for their translation. Acts at position 390 in COXI mt-mRNA and at position 697-699 in mitochondrial COXIII mt-mRNA. As a component of a functional protein-RNA module, consisting of RCC1L, NGRN, RPUSD3, RPUSD4, TRUB2, FASTKD2 and 16S mitochondrial ribosomal RNA (16S mt-rRNA), controls 16S mt-rRNA abundance and may play a role in mitochondrial ribosome biogenesis.
Uniprot ID
Q6P087
Ensemble ID
ENST00000383820.10
HGNC ID
HGNC:28437

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 16 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info  		15.00  LDD0402  [1]
AHL-Pu-1
 Probe Info  		C172(2.70)  LDD0170  [2]
DBIA
 Probe Info  		C172(3.68); C147(20.00)  LDD0080  [3]
4-Iodoacetamidophenylacetylene
 Probe Info  		N.A.  LDD0038  [4]
IA-alkyne
 Probe Info  		N.A.  LDD0162  [5]
Lodoacetamide azide
 Probe Info  		N.A.  LDD0037  [4]
JW-RF-010
 Probe Info  		N.A.  LDD0026  [6]
NAIA_5
 Probe Info  		N.A.  LDD2224  [7]
TFBX
 Probe Info  		C345(0.00); C172(0.00); C147(0.00)  LDD0027  [6]
Compound 10
 Probe Info  		N.A.  LDD2216  [8]
Compound 11
 Probe Info  		N.A.  LDD2213  [8]
IPM
 Probe Info  		C345(0.00); C147(0.00)  LDD0005  [9]
VSF
 Probe Info  		N.A.  LDD0007  [9]
Phosphinate-6
 Probe Info  		N.A.  LDD0018  [10]
Acrolein
 Probe Info  		C172(0.00); C147(0.00)  LDD0217  [11]
AOyne
 Probe Info  		13.40  LDD0443  [12]
PAL-AfBPP Probe
Click To Hide/Show 2 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
C278
 Probe Info  		48.50  LDD1948  [13]
STS-1
 Probe Info  		N.A.  LDD0137  [14]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0025  4SU-RNA DM93 C172(2.70)  LDD0170  [2]
 LDCM0214  AC1 HCT 116 C147(1.01); C172(0.72)  LDD0531  [3]
 LDCM0215  AC10 HCT 116 C147(0.97); C345(1.00)  LDD0532  [3]
 LDCM0216  AC100 HEK-293T C147(0.64)  LDD0814  [3]
 LDCM0217  AC101 HEK-293T C147(0.71)  LDD0815  [3]
 LDCM0218  AC102 HEK-293T C147(0.80)  LDD0816  [3]
 LDCM0219  AC103 HEK-293T C147(0.70)  LDD0817  [3]
 LDCM0220  AC104 HEK-293T C147(0.78)  LDD0818  [3]
 LDCM0221  AC105 HEK-293T C147(0.85)  LDD0819  [3]
 LDCM0222  AC106 HEK-293T C147(0.62)  LDD0820  [3]
 LDCM0223  AC107 HEK-293T C147(0.64)  LDD0821  [3]
 LDCM0224  AC108 HEK-293T C147(0.71)  LDD0822  [3]
 LDCM0225  AC109 HEK-293T C147(0.74)  LDD0823  [3]
 LDCM0226  AC11 HCT 116 C147(1.19); C345(0.80)  LDD0543  [3]
 LDCM0227  AC110 HEK-293T C147(0.68)  LDD0825  [3]
 LDCM0228  AC111 HEK-293T C147(0.74)  LDD0826  [3]
 LDCM0229  AC112 HEK-293T C147(0.82)  LDD0827  [3]
 LDCM0230  AC113 HCT 116 C147(1.03)  LDD0547  [3]
 LDCM0231  AC114 HCT 116 C147(0.90)  LDD0548  [3]
 LDCM0232  AC115 HCT 116 C147(1.00)  LDD0549  [3]
 LDCM0233  AC116 HCT 116 C147(1.00)  LDD0550  [3]
 LDCM0234  AC117 HCT 116 C147(0.94)  LDD0551  [3]
 LDCM0235  AC118 HCT 116 C147(1.00)  LDD0552  [3]
 LDCM0236  AC119 HCT 116 C147(1.06)  LDD0553  [3]
 LDCM0237  AC12 HCT 116 C147(0.94); C345(0.86)  LDD0554  [3]
 LDCM0238  AC120 HCT 116 C147(1.71)  LDD0555  [3]
 LDCM0239  AC121 HCT 116 C147(1.00)  LDD0556  [3]
 LDCM0240  AC122 HCT 116 C147(1.00)  LDD0557  [3]
 LDCM0241  AC123 HCT 116 C147(1.33)  LDD0558  [3]
 LDCM0242  AC124 HCT 116 C147(0.88)  LDD0559  [3]
 LDCM0243  AC125 HCT 116 C147(1.10)  LDD0560  [3]
 LDCM0244  AC126 HCT 116 C147(0.88)  LDD0561  [3]
 LDCM0245  AC127 HCT 116 C147(1.09)  LDD0562  [3]
 LDCM0246  AC128 HCT 116 C345(1.23)  LDD0563  [3]
 LDCM0247  AC129 HCT 116 C345(1.26)  LDD0564  [3]
 LDCM0249  AC130 HCT 116 C345(1.31)  LDD0566  [3]
 LDCM0250  AC131 HCT 116 C345(1.31)  LDD0567  [3]
 LDCM0251  AC132 HCT 116 C345(1.17)  LDD0568  [3]
 LDCM0252  AC133 HCT 116 C345(0.79)  LDD0569  [3]
 LDCM0253  AC134 HCT 116 C345(1.24)  LDD0570  [3]
 LDCM0254  AC135 HCT 116 C345(0.67)  LDD0571  [3]
 LDCM0255  AC136 HCT 116 C345(0.64)  LDD0572  [3]
 LDCM0256  AC137 HCT 116 C345(0.52)  LDD0573  [3]
 LDCM0257  AC138 HCT 116 C345(0.61)  LDD0574  [3]
 LDCM0258  AC139 HCT 116 C345(0.53)  LDD0575  [3]
 LDCM0259  AC14 HCT 116 C147(1.29); C345(0.78)  LDD0576  [3]
 LDCM0260  AC140 HCT 116 C345(0.75)  LDD0577  [3]
 LDCM0261  AC141 HCT 116 C345(0.72)  LDD0578  [3]
 LDCM0262  AC142 HCT 116 C345(0.91)  LDD0579  [3]
 LDCM0263  AC143 HEK-293T C147(1.11)  LDD0861  [3]
 LDCM0264  AC144 HEK-293T C147(1.04)  LDD0862  [3]
 LDCM0265  AC145 HEK-293T C147(1.29)  LDD0863  [3]
 LDCM0266  AC146 HEK-293T C147(1.31)  LDD0864  [3]
 LDCM0267  AC147 HEK-293T C147(1.08)  LDD0865  [3]
 LDCM0268  AC148 HEK-293T C147(1.33)  LDD0866  [3]
 LDCM0269  AC149 HEK-293T C147(0.93)  LDD0867  [3]
 LDCM0270  AC15 HCT 116 C345(0.67); C147(1.15)  LDD0587  [3]
 LDCM0271  AC150 HEK-293T C147(1.12)  LDD0869  [3]
 LDCM0272  AC151 HEK-293T C147(1.43)  LDD0870  [3]
 LDCM0273  AC152 HEK-293T C147(0.87)  LDD0871  [3]
 LDCM0274  AC153 HEK-293T C147(0.90)  LDD0872  [3]
 LDCM0621  AC154 HEK-293T C147(1.01)  LDD2162  [3]
 LDCM0622  AC155 HEK-293T C147(1.06)  LDD2163  [3]
 LDCM0623  AC156 HEK-293T C147(1.09)  LDD2164  [3]
 LDCM0624  AC157 HEK-293T C147(0.81)  LDD2165  [3]
 LDCM0276  AC17 HCT 116 C172(1.12)  LDD0593  [3]
 LDCM0277  AC18 HCT 116 C172(0.89)  LDD0594  [3]
 LDCM0278  AC19 HCT 116 C172(0.95)  LDD0595  [3]
 LDCM0279  AC2 HCT 116 C172(1.09); C147(1.15)  LDD0596  [3]
 LDCM0280  AC20 HCT 116 C172(1.51)  LDD0597  [3]
 LDCM0281  AC21 HCT 116 C172(1.33)  LDD0598  [3]
 LDCM0282  AC22 HCT 116 C172(1.27)  LDD0599  [3]
 LDCM0283  AC23 HCT 116 C172(1.43)  LDD0600  [3]
 LDCM0284  AC24 HCT 116 C172(1.70)  LDD0601  [3]
 LDCM0285  AC25 HCT 116 C147(1.08)  LDD0602  [3]
 LDCM0286  AC26 HCT 116 C147(1.09)  LDD0603  [3]
 LDCM0287  AC27 HCT 116 C147(1.08)  LDD0604  [3]
 LDCM0288  AC28 HCT 116 C147(1.14)  LDD0605  [3]
 LDCM0289  AC29 HCT 116 C147(1.29)  LDD0606  [3]
 LDCM0290  AC3 HCT 116 C147(1.19); C172(1.21)  LDD0607  [3]
 LDCM0291  AC30 HCT 116 C147(1.26)  LDD0608  [3]
 LDCM0292  AC31 HCT 116 C147(1.19)  LDD0609  [3]
 LDCM0293  AC32 HCT 116 C147(1.33)  LDD0610  [3]
 LDCM0294  AC33 HCT 116 C147(1.17)  LDD0611  [3]
 LDCM0295  AC34 HCT 116 C147(1.04)  LDD0612  [3]
 LDCM0296  AC35 HCT 116 C345(0.90); C172(1.68)  LDD0613  [3]
 LDCM0297  AC36 HCT 116 C345(0.80); C172(1.30)  LDD0614  [3]
 LDCM0298  AC37 HCT 116 C345(0.62); C172(1.00)  LDD0615  [3]
 LDCM0299  AC38 HCT 116 C345(1.02); C172(1.16)  LDD0616  [3]
 LDCM0300  AC39 HCT 116 C345(0.76); C172(1.25)  LDD0617  [3]
 LDCM0301  AC4 HCT 116 C147(0.94); C172(1.32)  LDD0618  [3]
 LDCM0302  AC40 HCT 116 C345(0.93); C172(1.16)  LDD0619  [3]
 LDCM0303  AC41 HCT 116 C172(1.16); C345(1.23)  LDD0620  [3]
 LDCM0304  AC42 HCT 116 C172(1.21); C345(1.57)  LDD0621  [3]
 LDCM0305  AC43 HCT 116 C172(0.74); C345(0.83)  LDD0622  [3]
 LDCM0306  AC44 HCT 116 C345(1.37); C172(1.37)  LDD0623  [3]
 LDCM0307  AC45 HCT 116 C172(0.95); C345(0.98)  LDD0624  [3]
 LDCM0308  AC46 HCT 116 C147(1.19)  LDD0625  [3]
 LDCM0309  AC47 HCT 116 C147(1.00)  LDD0626  [3]
 LDCM0310  AC48 HCT 116 C147(0.82)  LDD0627  [3]
 LDCM0311  AC49 HCT 116 C147(1.25)  LDD0628  [3]
 LDCM0312  AC5 HCT 116 C147(0.96); C172(1.06)  LDD0629  [3]
 LDCM0313  AC50 HCT 116 C147(1.55)  LDD0630  [3]
 LDCM0314  AC51 HCT 116 C147(0.98)  LDD0631  [3]
 LDCM0315  AC52 HCT 116 C147(1.09)  LDD0632  [3]
 LDCM0316  AC53 HCT 116 C147(1.23)  LDD0633  [3]
 LDCM0317  AC54 HCT 116 C147(0.93)  LDD0634  [3]
 LDCM0318  AC55 HCT 116 C147(1.07)  LDD0635  [3]
 LDCM0319  AC56 HCT 116 C147(1.20)  LDD0636  [3]
 LDCM0320  AC57 HEK-293T C147(1.02)  LDD0918  [3]
 LDCM0321  AC58 HEK-293T C147(0.97)  LDD0919  [3]
 LDCM0322  AC59 HEK-293T C147(1.08)  LDD0920  [3]
 LDCM0323  AC6 HCT 116 C345(0.92); C147(1.00)  LDD0640  [3]
 LDCM0324  AC60 HEK-293T C147(1.02)  LDD0922  [3]
 LDCM0325  AC61 HEK-293T C147(0.78)  LDD0923  [3]
 LDCM0326  AC62 HEK-293T C147(0.91)  LDD0924  [3]
 LDCM0327  AC63 HEK-293T C147(0.84)  LDD0925  [3]
 LDCM0328  AC64 HEK-293T C147(0.92)  LDD0926  [3]
 LDCM0329  AC65 HEK-293T C147(0.84)  LDD0927  [3]
 LDCM0330  AC66 HEK-293T C147(0.94)  LDD0928  [3]
 LDCM0331  AC67 HEK-293T C147(0.80)  LDD0929  [3]
 LDCM0332  AC68 HEK-293T C147(0.99)  LDD0930  [3]
 LDCM0333  AC69 HEK-293T C147(0.96)  LDD0931  [3]
 LDCM0334  AC7 HCT 116 C345(0.74); C147(1.04)  LDD0651  [3]
 LDCM0335  AC70 HEK-293T C147(0.91)  LDD0933  [3]
 LDCM0336  AC71 HEK-293T C147(0.85)  LDD0934  [3]
 LDCM0337  AC72 HEK-293T C147(0.94)  LDD0935  [3]
 LDCM0338  AC73 HEK-293T C147(1.16)  LDD0936  [3]
 LDCM0339  AC74 HEK-293T C147(0.92)  LDD0937  [3]
 LDCM0340  AC75 HEK-293T C147(1.11)  LDD0938  [3]
 LDCM0341  AC76 HEK-293T C147(0.91)  LDD0939  [3]
 LDCM0342  AC77 HEK-293T C147(0.87)  LDD0940  [3]
 LDCM0343  AC78 HEK-293T C147(0.97)  LDD0941  [3]
 LDCM0344  AC79 HEK-293T C147(0.96)  LDD0942  [3]
 LDCM0345  AC8 HCT 116 C345(1.06); C147(1.10)  LDD0662  [3]
 LDCM0346  AC80 HEK-293T C147(1.29)  LDD0944  [3]
 LDCM0347  AC81 HEK-293T C147(1.09)  LDD0945  [3]
 LDCM0348  AC82 HEK-293T C147(0.85)  LDD0946  [3]
 LDCM0349  AC83 HCT 116 C147(0.92)  LDD0666  [3]
 LDCM0350  AC84 HCT 116 C147(0.94)  LDD0667  [3]
 LDCM0351  AC85 HCT 116 C147(1.09)  LDD0668  [3]
 LDCM0352  AC86 HCT 116 C147(0.96)  LDD0669  [3]
 LDCM0353  AC87 HCT 116 C147(0.90)  LDD0670  [3]
 LDCM0354  AC88 HCT 116 C147(0.97)  LDD0671  [3]
 LDCM0355  AC89 HCT 116 C147(0.92)  LDD0672  [3]
 LDCM0357  AC90 HCT 116 C147(1.08)  LDD0674  [3]
 LDCM0358  AC91 HCT 116 C147(1.05)  LDD0675  [3]
 LDCM0359  AC92 HCT 116 C147(1.04)  LDD0676  [3]
 LDCM0360  AC93 HCT 116 C147(0.94)  LDD0677  [3]
 LDCM0361  AC94 HCT 116 C147(0.93)  LDD0678  [3]
 LDCM0362  AC95 HCT 116 C147(0.76)  LDD0679  [3]
 LDCM0363  AC96 HCT 116 C147(0.90)  LDD0680  [3]
 LDCM0364  AC97 HCT 116 C147(1.07)  LDD0681  [3]
 LDCM0365  AC98 HEK-293T C147(0.66)  LDD0963  [3]
 LDCM0366  AC99 HEK-293T C147(0.71)  LDD0964  [3]
 LDCM0248  AKOS034007472 HCT 116 C147(0.99); C345(0.81)  LDD0565  [3]
 LDCM0356  AKOS034007680 HCT 116 C345(0.98); C147(1.13)  LDD0673  [3]
 LDCM0275  AKOS034007705 HCT 116 C345(0.85); C147(1.00)  LDD0592  [3]
 LDCM0156  Aniline NCI-H1299 15.00  LDD0403  [1]
 LDCM0367  CL1 HCT 116 C147(1.21)  LDD0684  [3]
 LDCM0368  CL10 HCT 116 C147(1.11)  LDD0685  [3]
 LDCM0369  CL100 HCT 116 C147(1.01); C172(1.11)  LDD0686  [3]
 LDCM0370  CL101 HCT 116 C345(1.01); C147(1.55)  LDD0687  [3]
 LDCM0371  CL102 HCT 116 C345(0.64); C147(3.01)  LDD0688  [3]
 LDCM0372  CL103 HCT 116 C345(0.90); C147(1.46)  LDD0689  [3]
 LDCM0373  CL104 HCT 116 C345(1.03); C147(1.82)  LDD0690  [3]
 LDCM0374  CL105 HCT 116 C172(1.15)  LDD0691  [3]
 LDCM0375  CL106 HCT 116 C172(0.65)  LDD0692  [3]
 LDCM0376  CL107 HCT 116 C172(1.10)  LDD0693  [3]
 LDCM0377  CL108 HCT 116 C172(0.98)  LDD0694  [3]
 LDCM0378  CL109 HCT 116 C172(1.11)  LDD0695  [3]
 LDCM0379  CL11 HCT 116 C147(1.28)  LDD0696  [3]
 LDCM0380  CL110 HCT 116 C172(0.96)  LDD0697  [3]
 LDCM0381  CL111 HCT 116 C172(1.24)  LDD0698  [3]
 LDCM0382  CL112 HCT 116 C147(1.12)  LDD0699  [3]
 LDCM0383  CL113 HCT 116 C147(1.23)  LDD0700  [3]
 LDCM0384  CL114 HCT 116 C147(1.31)  LDD0701  [3]
 LDCM0385  CL115 HCT 116 C147(1.18)  LDD0702  [3]
 LDCM0386  CL116 HCT 116 C147(1.18)  LDD0703  [3]
 LDCM0387  CL117 HCT 116 C172(0.87); C345(1.32)  LDD0704  [3]
 LDCM0388  CL118 HCT 116 C345(0.66); C172(1.00)  LDD0705  [3]
 LDCM0389  CL119 HCT 116 C345(0.67); C172(0.99)  LDD0706  [3]
 LDCM0390  CL12 HCT 116 C147(1.52)  LDD0707  [3]
 LDCM0391  CL120 HCT 116 C345(0.84); C172(1.41)  LDD0708  [3]
 LDCM0392  CL121 HCT 116 C147(0.93)  LDD0709  [3]
 LDCM0393  CL122 HCT 116 C147(1.26)  LDD0710  [3]
 LDCM0394  CL123 HCT 116 C147(1.23)  LDD0711  [3]
 LDCM0395  CL124 HCT 116 C147(1.24)  LDD0712  [3]
 LDCM0396  CL125 HEK-293T C147(0.99)  LDD0994  [3]
 LDCM0397  CL126 HEK-293T C147(1.36)  LDD0995  [3]
 LDCM0398  CL127 HEK-293T C147(1.10)  LDD0996  [3]
 LDCM0399  CL128 HEK-293T C147(1.16)  LDD0997  [3]
 LDCM0400  CL13 HCT 116 C147(1.25)  LDD0717  [3]
 LDCM0401  CL14 HCT 116 C147(1.03)  LDD0718  [3]
 LDCM0402  CL15 HCT 116 C147(2.22)  LDD0719  [3]
 LDCM0403  CL16 HCT 116 C172(0.59); C147(0.88); C345(1.33)  LDD0720  [3]
 LDCM0404  CL17 HCT 116 C172(0.75); C345(0.97); C147(1.32)  LDD0721  [3]
 LDCM0405  CL18 HCT 116 C172(0.40); C147(0.85); C345(1.26)  LDD0722  [3]
 LDCM0406  CL19 HCT 116 C172(0.46); C147(1.13); C345(1.19)  LDD0723  [3]
 LDCM0407  CL2 HCT 116 C147(0.90)  LDD0724  [3]
 LDCM0408  CL20 HCT 116 C172(0.53); C345(1.05); C147(1.06)  LDD0725  [3]
 LDCM0409  CL21 HCT 116 C172(0.55); C345(1.06); C147(1.31)  LDD0726  [3]
 LDCM0410  CL22 HCT 116 C172(0.57); C345(1.05); C147(1.47)  LDD0727  [3]
 LDCM0411  CL23 HCT 116 C172(0.71); C345(1.05); C147(1.07)  LDD0728  [3]
 LDCM0412  CL24 HCT 116 C147(1.00); C172(0.39); C345(1.51)  LDD0729  [3]
 LDCM0413  CL25 HCT 116 C147(1.04); C172(0.56); C345(1.30)  LDD0730  [3]
 LDCM0414  CL26 HCT 116 C147(0.95); C172(0.62); C345(1.10)  LDD0731  [3]
 LDCM0415  CL27 HCT 116 C147(1.04); C172(0.59); C345(1.57)  LDD0732  [3]
 LDCM0416  CL28 HCT 116 C147(0.99); C172(0.57); C345(1.26)  LDD0733  [3]
 LDCM0417  CL29 HCT 116 C147(1.26); C172(0.65); C345(1.68)  LDD0734  [3]
 LDCM0418  CL3 HCT 116 C147(1.04)  LDD0735  [3]
 LDCM0419  CL30 HCT 116 C147(1.04); C172(0.69); C345(1.41)  LDD0736  [3]
 LDCM0420  CL31 HCT 116 C147(1.02); C172(0.84)  LDD0737  [3]
 LDCM0421  CL32 HCT 116 C172(0.77)  LDD0738  [3]
 LDCM0422  CL33 HCT 116 C172(0.95)  LDD0739  [3]
 LDCM0423  CL34 HCT 116 C172(0.72)  LDD0740  [3]
 LDCM0424  CL35 HCT 116 C172(0.73)  LDD0741  [3]
 LDCM0425  CL36 HCT 116 C172(0.82)  LDD0742  [3]
 LDCM0426  CL37 HCT 116 C172(0.75)  LDD0743  [3]
 LDCM0428  CL39 HCT 116 C172(0.77)  LDD0745  [3]
 LDCM0429  CL4 HCT 116 C147(2.40)  LDD0746  [3]
 LDCM0430  CL40 HCT 116 C172(0.87)  LDD0747  [3]
 LDCM0431  CL41 HCT 116 C172(0.84)  LDD0748  [3]
 LDCM0432  CL42 HCT 116 C172(0.77)  LDD0749  [3]
 LDCM0433  CL43 HCT 116 C172(0.78)  LDD0750  [3]
 LDCM0434  CL44 HCT 116 C172(0.73)  LDD0751  [3]
 LDCM0435  CL45 HCT 116 C172(0.88)  LDD0752  [3]
 LDCM0436  CL46 HCT 116 C345(1.04)  LDD0753  [3]
 LDCM0437  CL47 HCT 116 C345(0.85)  LDD0754  [3]
 LDCM0438  CL48 HCT 116 C345(1.23)  LDD0755  [3]
 LDCM0439  CL49 HCT 116 C345(1.13)  LDD0756  [3]
 LDCM0440  CL5 HCT 116 C147(0.96)  LDD0757  [3]
 LDCM0441  CL50 HCT 116 C345(1.03)  LDD0758  [3]
 LDCM0442  CL51 HCT 116 C345(1.03)  LDD0759  [3]
 LDCM0443  CL52 HCT 116 C345(0.99)  LDD0760  [3]
 LDCM0444  CL53 HCT 116 C345(0.91)  LDD0761  [3]
 LDCM0445  CL54 HCT 116 C345(1.07)  LDD0762  [3]
 LDCM0446  CL55 HCT 116 C345(1.18)  LDD0763  [3]
 LDCM0447  CL56 HCT 116 C345(0.93)  LDD0764  [3]
 LDCM0448  CL57 HCT 116 C345(0.88)  LDD0765  [3]
 LDCM0449  CL58 HCT 116 C345(1.05)  LDD0766  [3]
 LDCM0450  CL59 HCT 116 C345(1.05)  LDD0767  [3]
 LDCM0451  CL6 HCT 116 C147(1.08)  LDD0768  [3]
 LDCM0452  CL60 HCT 116 C345(1.33)  LDD0769  [3]
 LDCM0453  CL61 HCT 116 C172(0.76)  LDD0770  [3]
 LDCM0454  CL62 HCT 116 C172(0.81)  LDD0771  [3]
 LDCM0455  CL63 HCT 116 C172(0.76)  LDD0772  [3]
 LDCM0456  CL64 HCT 116 C172(0.81)  LDD0773  [3]
 LDCM0457  CL65 HCT 116 C172(0.73)  LDD0774  [3]
 LDCM0458  CL66 HCT 116 C172(0.61)  LDD0775  [3]
 LDCM0459  CL67 HCT 116 C172(0.59)  LDD0776  [3]
 LDCM0460  CL68 HCT 116 C172(0.63)  LDD0777  [3]
 LDCM0461  CL69 HCT 116 C172(0.62)  LDD0778  [3]
 LDCM0462  CL7 HCT 116 C147(0.91)  LDD0779  [3]
 LDCM0463  CL70 HCT 116 C172(0.55)  LDD0780  [3]
 LDCM0464  CL71 HCT 116 C172(0.86)  LDD0781  [3]
 LDCM0465  CL72 HCT 116 C172(0.76)  LDD0782  [3]
 LDCM0466  CL73 HCT 116 C172(1.24)  LDD0783  [3]
 LDCM0467  CL74 HCT 116 C172(0.82)  LDD0784  [3]
 LDCM0469  CL76 HEK-293T C147(1.21)  LDD1067  [3]
 LDCM0470  CL77 HEK-293T C147(1.73)  LDD1068  [3]
 LDCM0471  CL78 HEK-293T C147(0.80)  LDD1069  [3]
 LDCM0472  CL79 HEK-293T C147(0.88)  LDD1070  [3]
 LDCM0473  CL8 HCT 116 C147(1.06)  LDD0790  [3]
 LDCM0474  CL80 HEK-293T C147(1.12)  LDD1072  [3]
 LDCM0475  CL81 HEK-293T C147(0.89)  LDD1073  [3]
 LDCM0476  CL82 HEK-293T C147(0.77)  LDD1074  [3]
 LDCM0477  CL83 HEK-293T C147(1.37)  LDD1075  [3]
 LDCM0478  CL84 HEK-293T C147(1.20)  LDD1076  [3]
 LDCM0479  CL85 HEK-293T C147(0.82)  LDD1077  [3]
 LDCM0480  CL86 HEK-293T C147(1.07)  LDD1078  [3]
 LDCM0481  CL87 HEK-293T C147(1.34)  LDD1079  [3]
 LDCM0482  CL88 HEK-293T C147(1.40)  LDD1080  [3]
 LDCM0483  CL89 HEK-293T C147(1.22)  LDD1081  [3]
 LDCM0484  CL9 HCT 116 C147(1.52)  LDD0801  [3]
 LDCM0485  CL90 HEK-293T C147(2.24)  LDD1083  [3]
 LDCM0486  CL91 HCT 116 C147(1.21); C172(1.27)  LDD0803  [3]
 LDCM0487  CL92 HCT 116 C147(1.24); C172(0.99)  LDD0804  [3]
 LDCM0488  CL93 HCT 116 C147(1.19); C172(0.90)  LDD0805  [3]
 LDCM0489  CL94 HCT 116 C147(0.97); C172(1.03)  LDD0806  [3]
 LDCM0490  CL95 HCT 116 C147(1.14); C172(1.38)  LDD0807  [3]
 LDCM0491  CL96 HCT 116 C147(1.15); C172(1.22)  LDD0808  [3]
 LDCM0492  CL97 HCT 116 C147(1.27); C172(0.94)  LDD0809  [3]
 LDCM0493  CL98 HCT 116 C147(1.01); C172(0.90)  LDD0810  [3]
 LDCM0494  CL99 HCT 116 C147(1.18); C172(0.98)  LDD0811  [3]
 LDCM0495  E2913 HEK-293T C172(1.01); C147(1.14); C345(0.89)  LDD1698  [15]
 LDCM0213  Electrophilic fragment 2 MDA-MB-231 C345(1.00)  LDD1702  [16]
 LDCM0625  F8 Ramos C345(2.65); C147(1.35)  LDD2187  [17]
 LDCM0572  Fragment10 Ramos C345(0.70)  LDD2189  [17]
 LDCM0573  Fragment11 Ramos C345(0.12); C147(0.51)  LDD2190  [17]
 LDCM0574  Fragment12 Ramos C345(0.41); C147(1.58)  LDD2191  [17]
 LDCM0575  Fragment13 Ramos C345(0.93); C147(1.54)  LDD2192  [17]
 LDCM0576  Fragment14 Ramos C345(0.71); C147(0.72)  LDD2193  [17]
 LDCM0579  Fragment20 Ramos C345(0.81); C147(2.85)  LDD2194  [17]
 LDCM0580  Fragment21 Ramos C345(0.52); C147(0.86)  LDD2195  [17]
 LDCM0582  Fragment23 Ramos C345(0.71); C147(0.82)  LDD2196  [17]
 LDCM0578  Fragment27 Ramos C345(0.91); C147(0.94)  LDD2197  [17]
 LDCM0586  Fragment28 Ramos C345(0.58); C147(1.54)  LDD2198  [17]
 LDCM0588  Fragment30 Ramos C345(1.24); C147(1.77)  LDD2199  [17]
 LDCM0589  Fragment31 Ramos C345(0.91); C147(0.94)  LDD2200  [17]
 LDCM0590  Fragment32 Ramos C345(0.37)  LDD2201  [17]
 LDCM0468  Fragment33 HCT 116 C172(0.71)  LDD0785  [3]
 LDCM0596  Fragment38 Ramos C345(0.52); C147(0.75)  LDD2203  [17]
 LDCM0566  Fragment4 Ramos C345(1.00); C147(1.47)  LDD2184  [17]
 LDCM0427  Fragment51 HCT 116 C172(0.95)  LDD0744  [3]
 LDCM0610  Fragment52 Ramos C345(0.86); C147(1.22)  LDD2204  [17]
 LDCM0614  Fragment56 Ramos C345(0.76); C147(0.94)  LDD2205  [17]
 LDCM0569  Fragment7 Ramos C345(0.61); C147(1.47)  LDD2186  [17]
 LDCM0571  Fragment9 Ramos C345(0.92); C147(2.38)  LDD2188  [17]
 LDCM0022  KB02 HCT 116 C172(3.68); C147(20.00)  LDD0080  [3]
 LDCM0023  KB03 HCT 116 C172(1.77); C147(3.30)  LDD0081  [3]
 LDCM0024  KB05 HCT 116 C172(2.12); C147(1.09)  LDD0082  [3]
 LDCM0131  RA190 MM1.R C147(1.20)  LDD0304  [18]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Other
Click To Hide/Show 4 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Cysteine-rich tail protein 1 (CYSRT1) CYSRT1 family A8MQ03
Keratin, type I cuticular Ha1 (KRT31) Intermediate filament family Q15323
Keratin-associated protein 1-1 (KRTAP1-1) KRTAP type 1 family Q07627
Keratin-associated protein 10-7 (KRTAP10-7) KRTAP type 10 family P60409

References

1 Quantitative and Site-Specific Chemoproteomic Profiling of Targets of Acrolein. Chem Res Toxicol. 2019 Mar 18;32(3):467-473. doi: 10.1021/acs.chemrestox.8b00343. Epub 2019 Jan 15.
2 Chemoproteomic capture of RNA binding activity in living cells. Nat Commun. 2023 Oct 7;14(1):6282. doi: 10.1038/s41467-023-41844-z.
Mass spectrometry data entry: PXD044625
3 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
4 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
5 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
6 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
7 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
8 Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling. Anal Chem. 2021 Feb 2;93(4):2610-2618. doi: 10.1021/acs.analchem.0c04726. Epub 2021 Jan 20.
Mass spectrometry data entry: PXD022279
9 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
10 DFT-Guided Discovery of Ethynyl-Triazolyl-Phosphinates as Modular Electrophiles for Chemoselective Cysteine Bioconjugation and Profiling. Angew Chem Int Ed Engl. 2022 Oct 10;61(41):e202205348. doi: 10.1002/anie.202205348. Epub 2022 Aug 22.
Mass spectrometry data entry: PXD033004
11 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
12 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
13 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587
14 Design and synthesis of minimalist terminal alkyne-containing diazirine photo-crosslinkers and their incorporation into kinase inhibitors for cell- and tissue-based proteome profiling. Angew Chem Int Ed Engl. 2013 Aug 12;52(33):8551-6. doi: 10.1002/anie.201300683. Epub 2013 Jun 10.
15 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
16 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
17 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
18 Physical and Functional Analysis of the Putative Rpn13 Inhibitor RA190. Cell Chem Biol. 2020 Nov 19;27(11):1371-1382.e6. doi: 10.1016/j.chembiol.2020.08.007. Epub 2020 Aug 27.