Details of the Target

General Information of Target

Target ID LDTP11134
Target Name DNA replication complex GINS protein SLD5 (GINS4)
Gene Name GINS4
Gene ID 84296
Synonyms
SLD5; DNA replication complex GINS protein SLD5; GINS complex subunit 4) [Cleaved into: DNA replication complex GINS protein SLD5, N-terminally processed]
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MLPAVGSADEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN
YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAI
ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE
EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSRVDLS
NVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWE
KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLL
GRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT
Target Bioclass
Other
Family
GINS4/SLD5 family
Subcellular location
Nucleus
Function
Required for correct functioning of the GINS complex, a complex that plays an essential role in the initiation of DNA replication, and progression of DNA replication forks. GINS complex is a core component of CDC45-MCM-GINS (CMG) helicase, the molecular machine that unwinds template DNA during replication, and around which the replisome is built.
Uniprot ID
Q9BRT9
Ensemble ID
ENST00000276533.4
HGNC ID
HGNC:28226

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
LS180 SNV: p.D197A .
RKO SNV: p.T2I .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 10 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info  		15.00  LDD0402  [1]
AHL-Pu-1
 Probe Info  		C53(2.19)  LDD0169  [2]
DBIA
 Probe Info  		C53(0.95)  LDD1492  [3]
4-Iodoacetamidophenylacetylene
 Probe Info  		N.A.  LDD0038  [4]
IA-alkyne
 Probe Info  		N.A.  LDD0036  [4]
IPIAA_L
 Probe Info  		N.A.  LDD0031  [5]
Lodoacetamide azide
 Probe Info  		N.A.  LDD0037  [4]
1c-yne
 Probe Info  		N.A.  LDD0228  [6]
AOyne
 Probe Info  		13.40  LDD0443  [7]
NAIA_5
 Probe Info  		N.A.  LDD2223  [8]
PAL-AfBPP Probe
Click To Hide/Show 5 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
C003
 Probe Info  		15.78  LDD1713  [9]
C040
 Probe Info  		7.73  LDD1740  [9]
C067
 Probe Info  		7.06  LDD1763  [9]
C265
 Probe Info  		13.00  LDD1936  [9]
C397
 Probe Info  		10.34  LDD2056  [9]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0026  4SU-RNA+native RNA HEK-293T C53(2.19)  LDD0169  [2]
 LDCM0214  AC1 HEK-293T C53(0.94)  LDD1507  [3]
 LDCM0215  AC10 HEK-293T C53(0.93)  LDD1508  [3]
 LDCM0226  AC11 HEK-293T C53(1.00)  LDD1509  [3]
 LDCM0237  AC12 HEK-293T C53(0.95)  LDD1510  [3]
 LDCM0259  AC14 HEK-293T C53(1.03)  LDD1512  [3]
 LDCM0270  AC15 HEK-293T C53(1.12)  LDD1513  [3]
 LDCM0276  AC17 HEK-293T C53(0.98)  LDD1515  [3]
 LDCM0277  AC18 HEK-293T C53(1.04)  LDD1516  [3]
 LDCM0278  AC19 HEK-293T C53(0.85)  LDD1517  [3]
 LDCM0279  AC2 HEK-293T C53(1.04)  LDD1518  [3]
 LDCM0280  AC20 HEK-293T C53(0.95)  LDD1519  [3]
 LDCM0281  AC21 HEK-293T C53(0.98)  LDD1520  [3]
 LDCM0282  AC22 HEK-293T C53(1.02)  LDD1521  [3]
 LDCM0283  AC23 HEK-293T C53(0.99)  LDD1522  [3]
 LDCM0284  AC24 HEK-293T C53(1.02)  LDD1523  [3]
 LDCM0285  AC25 HEK-293T C53(0.90)  LDD1524  [3]
 LDCM0286  AC26 HEK-293T C53(0.99)  LDD1525  [3]
 LDCM0287  AC27 HEK-293T C53(1.00)  LDD1526  [3]
 LDCM0288  AC28 HEK-293T C53(0.96)  LDD1527  [3]
 LDCM0289  AC29 HEK-293T C53(0.94)  LDD1528  [3]
 LDCM0290  AC3 HEK-293T C53(1.01)  LDD1529  [3]
 LDCM0291  AC30 HEK-293T C53(1.01)  LDD1530  [3]
 LDCM0292  AC31 HEK-293T C53(0.94)  LDD1531  [3]
 LDCM0293  AC32 HEK-293T C53(1.07)  LDD1532  [3]
 LDCM0294  AC33 HEK-293T C53(1.06)  LDD1533  [3]
 LDCM0295  AC34 HEK-293T C53(1.04)  LDD1534  [3]
 LDCM0296  AC35 HEK-293T C53(1.06)  LDD1535  [3]
 LDCM0297  AC36 HEK-293T C53(0.92)  LDD1536  [3]
 LDCM0298  AC37 HEK-293T C53(1.13)  LDD1537  [3]
 LDCM0299  AC38 HEK-293T C53(1.03)  LDD1538  [3]
 LDCM0300  AC39 HEK-293T C53(1.10)  LDD1539  [3]
 LDCM0301  AC4 HEK-293T C53(1.03)  LDD1540  [3]
 LDCM0302  AC40 HEK-293T C53(1.06)  LDD1541  [3]
 LDCM0303  AC41 HEK-293T C53(0.96)  LDD1542  [3]
 LDCM0304  AC42 HEK-293T C53(0.96)  LDD1543  [3]
 LDCM0305  AC43 HEK-293T C53(1.06)  LDD1544  [3]
 LDCM0306  AC44 HEK-293T C53(0.95)  LDD1545  [3]
 LDCM0307  AC45 HEK-293T C53(0.97)  LDD1546  [3]
 LDCM0308  AC46 HEK-293T C53(1.09)  LDD1547  [3]
 LDCM0309  AC47 HEK-293T C53(1.03)  LDD1548  [3]
 LDCM0310  AC48 HEK-293T C53(1.05)  LDD1549  [3]
 LDCM0311  AC49 HEK-293T C53(0.94)  LDD1550  [3]
 LDCM0312  AC5 HEK-293T C53(1.05)  LDD1551  [3]
 LDCM0313  AC50 HEK-293T C53(1.01)  LDD1552  [3]
 LDCM0314  AC51 HEK-293T C53(1.04)  LDD1553  [3]
 LDCM0315  AC52 HEK-293T C53(1.03)  LDD1554  [3]
 LDCM0316  AC53 HEK-293T C53(1.03)  LDD1555  [3]
 LDCM0317  AC54 HEK-293T C53(0.97)  LDD1556  [3]
 LDCM0318  AC55 HEK-293T C53(1.05)  LDD1557  [3]
 LDCM0319  AC56 HEK-293T C53(1.04)  LDD1558  [3]
 LDCM0320  AC57 HEK-293T C53(0.92)  LDD1559  [3]
 LDCM0321  AC58 HEK-293T C53(0.97)  LDD1560  [3]
 LDCM0322  AC59 HEK-293T C53(1.00)  LDD1561  [3]
 LDCM0323  AC6 HEK-293T C53(1.03)  LDD1562  [3]
 LDCM0324  AC60 HEK-293T C53(0.99)  LDD1563  [3]
 LDCM0325  AC61 HEK-293T C53(0.93)  LDD1564  [3]
 LDCM0326  AC62 HEK-293T C53(0.94)  LDD1565  [3]
 LDCM0327  AC63 HEK-293T C53(0.99)  LDD1566  [3]
 LDCM0328  AC64 HEK-293T C53(0.99)  LDD1567  [3]
 LDCM0334  AC7 HEK-293T C53(0.97)  LDD1568  [3]
 LDCM0345  AC8 HEK-293T C53(1.00)  LDD1569  [3]
 LDCM0248  AKOS034007472 HEK-293T C53(1.03)  LDD1511  [3]
 LDCM0356  AKOS034007680 HEK-293T C53(0.94)  LDD1570  [3]
 LDCM0275  AKOS034007705 HEK-293T C53(0.99)  LDD1514  [3]
 LDCM0156  Aniline NCI-H1299 15.00  LDD0403  [1]
 LDCM0367  CL1 HEK-293T C53(0.85)  LDD1571  [3]
 LDCM0368  CL10 HEK-293T C53(0.89)  LDD1572  [3]
 LDCM0369  CL100 HEK-293T C53(0.90)  LDD1573  [3]
 LDCM0370  CL101 HEK-293T C53(0.86)  LDD1574  [3]
 LDCM0371  CL102 HEK-293T C53(0.93)  LDD1575  [3]
 LDCM0372  CL103 HEK-293T C53(1.15)  LDD1576  [3]
 LDCM0373  CL104 HEK-293T C53(0.92)  LDD1577  [3]
 LDCM0374  CL105 HEK-293T C53(0.97)  LDD1578  [3]
 LDCM0375  CL106 HEK-293T C53(0.91)  LDD1579  [3]
 LDCM0376  CL107 HEK-293T C53(1.04)  LDD1580  [3]
 LDCM0377  CL108 HEK-293T C53(1.05)  LDD1581  [3]
 LDCM0378  CL109 HEK-293T C53(0.96)  LDD1582  [3]
 LDCM0379  CL11 HEK-293T C53(1.26)  LDD1583  [3]
 LDCM0380  CL110 HEK-293T C53(0.91)  LDD1584  [3]
 LDCM0381  CL111 HEK-293T C53(0.85)  LDD1585  [3]
 LDCM0382  CL112 HEK-293T C53(0.95)  LDD1586  [3]
 LDCM0383  CL113 HEK-293T C53(0.92)  LDD1587  [3]
 LDCM0384  CL114 HEK-293T C53(0.91)  LDD1588  [3]
 LDCM0385  CL115 HEK-293T C53(0.94)  LDD1589  [3]
 LDCM0386  CL116 HEK-293T C53(1.07)  LDD1590  [3]
 LDCM0387  CL117 HEK-293T C53(0.90)  LDD1591  [3]
 LDCM0388  CL118 HEK-293T C53(0.96)  LDD1592  [3]
 LDCM0389  CL119 HEK-293T C53(0.95)  LDD1593  [3]
 LDCM0390  CL12 HEK-293T C53(1.08)  LDD1594  [3]
 LDCM0391  CL120 HEK-293T C53(0.95)  LDD1595  [3]
 LDCM0392  CL121 HEK-293T C53(0.91)  LDD1596  [3]
 LDCM0393  CL122 HEK-293T C53(1.00)  LDD1597  [3]
 LDCM0394  CL123 HEK-293T C53(0.86)  LDD1598  [3]
 LDCM0395  CL124 HEK-293T C53(0.98)  LDD1599  [3]
 LDCM0396  CL125 HEK-293T C53(0.96)  LDD1600  [3]
 LDCM0397  CL126 HEK-293T C53(0.86)  LDD1601  [3]
 LDCM0398  CL127 HEK-293T C53(0.99)  LDD1602  [3]
 LDCM0399  CL128 HEK-293T C53(0.92)  LDD1603  [3]
 LDCM0400  CL13 HEK-293T C53(0.85)  LDD1604  [3]
 LDCM0401  CL14 HEK-293T C53(1.06)  LDD1605  [3]
 LDCM0402  CL15 HEK-293T C53(0.92)  LDD1606  [3]
 LDCM0403  CL16 HEK-293T C53(0.99)  LDD1607  [3]
 LDCM0404  CL17 HEK-293T C53(0.88)  LDD1608  [3]
 LDCM0405  CL18 HEK-293T C53(1.06)  LDD1609  [3]
 LDCM0406  CL19 HEK-293T C53(1.09)  LDD1610  [3]
 LDCM0407  CL2 HEK-293T C53(0.96)  LDD1611  [3]
 LDCM0408  CL20 HEK-293T C53(1.05)  LDD1612  [3]
 LDCM0409  CL21 HEK-293T C53(1.11)  LDD1613  [3]
 LDCM0410  CL22 HEK-293T C53(1.23)  LDD1614  [3]
 LDCM0411  CL23 HEK-293T C53(1.29)  LDD1615  [3]
 LDCM0412  CL24 HEK-293T C53(1.17)  LDD1616  [3]
 LDCM0413  CL25 HEK-293T C53(0.88)  LDD1617  [3]
 LDCM0414  CL26 HEK-293T C53(1.07)  LDD1618  [3]
 LDCM0415  CL27 HEK-293T C53(1.04)  LDD1619  [3]
 LDCM0416  CL28 HEK-293T C53(0.93)  LDD1620  [3]
 LDCM0417  CL29 HEK-293T C53(1.06)  LDD1621  [3]
 LDCM0418  CL3 HEK-293T C53(0.86)  LDD1622  [3]
 LDCM0419  CL30 HEK-293T C53(0.99)  LDD1623  [3]
 LDCM0420  CL31 HEK-293T C53(1.19)  LDD1624  [3]
 LDCM0421  CL32 HEK-293T C53(1.06)  LDD1625  [3]
 LDCM0422  CL33 HEK-293T C53(0.83)  LDD1626  [3]
 LDCM0423  CL34 HEK-293T C53(1.15)  LDD1627  [3]
 LDCM0424  CL35 HEK-293T C53(1.16)  LDD1628  [3]
 LDCM0425  CL36 HEK-293T C53(1.24)  LDD1629  [3]
 LDCM0426  CL37 HEK-293T C53(0.91)  LDD1630  [3]
 LDCM0428  CL39 HEK-293T C53(0.86)  LDD1632  [3]
 LDCM0429  CL4 HEK-293T C53(0.89)  LDD1633  [3]
 LDCM0430  CL40 HEK-293T C53(1.09)  LDD1634  [3]
 LDCM0431  CL41 HEK-293T C53(0.97)  LDD1635  [3]
 LDCM0432  CL42 HEK-293T C53(1.01)  LDD1636  [3]
 LDCM0433  CL43 HEK-293T C53(1.17)  LDD1637  [3]
 LDCM0434  CL44 HEK-293T C53(1.18)  LDD1638  [3]
 LDCM0435  CL45 HEK-293T C53(0.97)  LDD1639  [3]
 LDCM0436  CL46 HEK-293T C53(1.18)  LDD1640  [3]
 LDCM0437  CL47 HEK-293T C53(1.20)  LDD1641  [3]
 LDCM0438  CL48 HEK-293T C53(1.09)  LDD1642  [3]
 LDCM0439  CL49 HEK-293T C53(0.84)  LDD1643  [3]
 LDCM0440  CL5 HEK-293T C53(1.01)  LDD1644  [3]
 LDCM0441  CL50 HEK-293T C53(0.97)  LDD1645  [3]
 LDCM0443  CL52 HEK-293T C53(1.11)  LDD1646  [3]
 LDCM0444  CL53 HEK-293T C53(0.92)  LDD1647  [3]
 LDCM0445  CL54 HEK-293T C53(1.02)  LDD1648  [3]
 LDCM0446  CL55 HEK-293T C53(1.13)  LDD1649  [3]
 LDCM0447  CL56 HEK-293T C53(1.00)  LDD1650  [3]
 LDCM0448  CL57 HEK-293T C53(1.01)  LDD1651  [3]
 LDCM0449  CL58 HEK-293T C53(1.14)  LDD1652  [3]
 LDCM0450  CL59 HEK-293T C53(1.27)  LDD1653  [3]
 LDCM0451  CL6 HEK-293T C53(0.90)  LDD1654  [3]
 LDCM0452  CL60 HEK-293T C53(1.13)  LDD1655  [3]
 LDCM0453  CL61 HEK-293T C53(0.90)  LDD1656  [3]
 LDCM0454  CL62 HEK-293T C53(1.02)  LDD1657  [3]
 LDCM0455  CL63 HEK-293T C53(1.10)  LDD1658  [3]
 LDCM0456  CL64 HEK-293T C53(0.95)  LDD1659  [3]
 LDCM0457  CL65 HEK-293T C53(0.98)  LDD1660  [3]
 LDCM0458  CL66 HEK-293T C53(0.98)  LDD1661  [3]
 LDCM0459  CL67 HEK-293T C53(1.06)  LDD1662  [3]
 LDCM0460  CL68 HEK-293T C53(1.07)  LDD1663  [3]
 LDCM0461  CL69 HEK-293T C53(1.08)  LDD1664  [3]
 LDCM0462  CL7 HEK-293T C53(1.05)  LDD1665  [3]
 LDCM0463  CL70 HEK-293T C53(1.26)  LDD1666  [3]
 LDCM0464  CL71 HEK-293T C53(1.21)  LDD1667  [3]
 LDCM0465  CL72 HEK-293T C53(1.21)  LDD1668  [3]
 LDCM0466  CL73 HEK-293T C53(0.81)  LDD1669  [3]
 LDCM0467  CL74 HEK-293T C53(0.88)  LDD1670  [3]
 LDCM0469  CL76 HEK-293T C53(0.98)  LDD1672  [3]
 LDCM0470  CL77 HEK-293T C53(0.83)  LDD1673  [3]
 LDCM0471  CL78 HEK-293T C53(1.00)  LDD1674  [3]
 LDCM0472  CL79 HEK-293T C53(1.03)  LDD1675  [3]
 LDCM0473  CL8 HEK-293T C53(0.72)  LDD1676  [3]
 LDCM0474  CL80 HEK-293T C53(1.07)  LDD1677  [3]
 LDCM0475  CL81 HEK-293T C53(1.06)  LDD1678  [3]
 LDCM0476  CL82 HEK-293T C53(1.04)  LDD1679  [3]
 LDCM0477  CL83 HEK-293T C53(1.17)  LDD1680  [3]
 LDCM0478  CL84 HEK-293T C53(1.06)  LDD1681  [3]
 LDCM0479  CL85 HEK-293T C53(0.90)  LDD1682  [3]
 LDCM0480  CL86 HEK-293T C53(0.95)  LDD1683  [3]
 LDCM0481  CL87 HEK-293T C53(0.99)  LDD1684  [3]
 LDCM0482  CL88 HEK-293T C53(1.06)  LDD1685  [3]
 LDCM0483  CL89 HEK-293T C53(0.95)  LDD1686  [3]
 LDCM0484  CL9 HEK-293T C53(1.11)  LDD1687  [3]
 LDCM0485  CL90 HEK-293T C53(0.74)  LDD1688  [3]
 LDCM0486  CL91 HEK-293T C53(1.03)  LDD1689  [3]
 LDCM0487  CL92 HEK-293T C53(0.99)  LDD1690  [3]
 LDCM0488  CL93 HEK-293T C53(0.98)  LDD1691  [3]
 LDCM0489  CL94 HEK-293T C53(1.00)  LDD1692  [3]
 LDCM0490  CL95 HEK-293T C53(0.90)  LDD1693  [3]
 LDCM0491  CL96 HEK-293T C53(1.03)  LDD1694  [3]
 LDCM0492  CL97 HEK-293T C53(0.80)  LDD1695  [3]
 LDCM0493  CL98 HEK-293T C53(0.91)  LDD1696  [3]
 LDCM0494  CL99 HEK-293T C53(0.96)  LDD1697  [3]
 LDCM0495  E2913 HEK-293T C53(1.03)  LDD1698  [3]
 LDCM0468  Fragment33 HEK-293T C53(0.97)  LDD1671  [3]
 LDCM0427  Fragment51 HEK-293T C53(0.99)  LDD1631  [3]
 LDCM0022  KB02 HEK-293T C53(0.95)  LDD1492  [3]
 LDCM0023  KB03 HEK-293T C53(0.94)  LDD1497  [3]
 LDCM0024  KB05 HEK-293T C53(0.88)  LDD1502  [3]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Putative serine/threonine-protein kinase SIK1B (SIK1B) CAMK Ser/Thr protein kinase family A0A0B4J2F2
Transcription factor
Click To Hide/Show 3 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Pre-B-cell leukemia transcription factor 4 (PBX4) TALE/PBX homeobox family Q9BYU1
DNA methyltransferase 1-associated protein 1 (DMAP1) . Q9NPF5
LIM/homeobox protein Lhx8 (LHX8) . Q68G74
Other
Click To Hide/Show 5 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Apoptosis-stimulating of p53 protein 1 (PPP1R13B) ASPP family Q96KQ4
Beta-catenin-interacting protein 1 (CTNNBIP1) CTNNBIP1 family Q9NSA3
DNA replication complex GINS protein PSF2 (GINS2) GINS2/PSF2 family Q9Y248
Mini-chromosome maintenance complex-binding protein (MCMBP) MCMBP family Q9BTE3
Bridging integrator 3 (BIN3) . Q9NQY0

References

1 Quantitative and Site-Specific Chemoproteomic Profiling of Targets of Acrolein. Chem Res Toxicol. 2019 Mar 18;32(3):467-473. doi: 10.1021/acs.chemrestox.8b00343. Epub 2019 Jan 15.
2 Chemoproteomic capture of RNA binding activity in living cells. Nat Commun. 2023 Oct 7;14(1):6282. doi: 10.1038/s41467-023-41844-z.
Mass spectrometry data entry: PXD044625
3 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
4 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
5 SP3-Enabled Rapid and High Coverage Chemoproteomic Identification of Cell-State-Dependent Redox-Sensitive Cysteines. Mol Cell Proteomics. 2022 Apr;21(4):100218. doi: 10.1016/j.mcpro.2022.100218. Epub 2022 Feb 25.
Mass spectrometry data entry: PXD029500 , PXD031647
6 Tunable Amine-Reactive Electrophiles for Selective Profiling of Lysine. Angew Chem Int Ed Engl. 2022 Jan 26;61(5):e202112107. doi: 10.1002/anie.202112107. Epub 2021 Dec 16.
7 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
8 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
9 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587