General Information of Target

Target ID LDTP00558
Target Name Phospholipid scramblase 1 (PLSCR1)
Gene Name PLSCR1
Gene ID 5359
Synonyms
Phospholipid scramblase 1; PL scramblase 1; Ca(2+)-dependent phospholipid scramblase 1; Erythrocyte phospholipid scramblase; Mg(2+)-dependent nuclease; EC 3.1.-.-; MmTRA1b
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MDKQNSQMNASHPETNLPVGYPPQYPPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGPAG
FPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIHQQIELLEVL
TGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLR
CSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCVVCSCC
GDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLI
DFMFFESTGSQEQKSGVW
Target Bioclass
Enzyme
Family
Phospholipid scramblase family
Subcellular location
Cell membrane
Function
Catalyzes calcium-induced ATP-independent rapid bidirectional and non-specific movement of phospholipids (lipid scrambling or lipid flip-flop) between the inner and outer leaflet of the plasma membrane resulting in collapse of the phospholipid asymmetry which leads to phosphatidylserine externalization on the cell surface. Mediates calcium-dependent phosphatidylserine externalization and apoptosis in neurons via its association with TRPC5. Also exhibits magnesium-dependent nuclease activity against double-stranded DNA and RNA but not single-stranded DNA and can enhance DNA decatenation mediated by TOP2A. Negatively regulates FcR-mediated phagocytosis in differentiated macrophages. May contribute to cytokine-regulated cell proliferation and differentiation. May play a role in the antiviral response of interferon (IFN) by amplifying and enhancing the IFN response through increased expression of select subset of potent antiviral genes. Inhibits the functions of viral transactivators, including human T-cell leukemia virus (HTLV)-1 protein Tax, human immunodeficiency virus (HIV)-1 Tat, human hepatitis B virus (HBV) HBx, Epstein-Barr virus (EBV) BZLF1 and human cytomegalovirus IE1 and IE2 proteins through direct interactions. Mediates also the inhibition of influenza virus infection by preventing nuclear import of the viral nucleoprotein/NP. Plays a crucial role as a defense factor against SARS-CoV-2 independently of its scramblase activity by directly targeting nascent viral vesicles to prevent virus-membrane fusion and the release of viral RNA into the host-cell cytosol.; (Microbial infection) Acts as an attachment receptor for HCV.
Uniprot ID
O15162
Ensemble ID
ENST00000342435.9
HGNC ID
HGNC:9092

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
CCK81 SNV: p.F217L DBIA    Probe Info 
DU145 SNV: p.A29V .
HG3 SNV: p.Y129C .
HT115 Insertion: p.T161YfsTer6 DBIA    Probe Info 
MCC26 SNV: p.L175V .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 11 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
IPM
 Probe Info 
N.A.  LDD0241  [1]
JZ128-DTB
 Probe Info 
N.A.  LDD0462  [2]
THZ1-DTB
 Probe Info 
C148(1.05)  LDD0460  [2]
BTD
 Probe Info 
C254(1.52)  LDD2090  [3]
DBIA
 Probe Info 
C254(1.11)  LDD0080  [4]
4-Iodoacetamidophenylacetylene
 Probe Info 
N.A.  LDD0038  [5]
IA-alkyne
 Probe Info 
N.A.  LDD0036  [5]
Lodoacetamide azide
 Probe Info 
N.A.  LDD0037  [5]
WYneN
 Probe Info 
N.A.  LDD0021  [6]
WYneO
 Probe Info 
N.A.  LDD0022  [6]
PF-06672131
 Probe Info 
N.A.  LDD0017  [7]
PAL-AfBPP Probe
Click To Hide/Show 1 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
STS-2
 Probe Info 
N.A.  LDD0138  [8]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0548  1-(4-(Benzo[d][1,3]dioxol-5-ylmethyl)piperazin-1-yl)-2-nitroethan-1-one MDA-MB-231 C254(0.58)  LDD2142  [3]
 LDCM0214  AC1 HEK-293T C254(0.92); C234(0.95)  LDD1507  [9]
 LDCM0215  AC10 HEK-293T C254(0.91); C148(1.03)  LDD1508  [9]
 LDCM0226  AC11 HEK-293T C254(0.94)  LDD1509  [9]
 LDCM0237  AC12 HEK-293T C254(0.89)  LDD1510  [9]
 LDCM0259  AC14 HEK-293T C254(0.92)  LDD1512  [9]
 LDCM0270  AC15 HEK-293T C254(0.73); C234(1.11); C148(1.16)  LDD1513  [9]
 LDCM0276  AC17 HEK-293T C254(1.03); C234(0.94)  LDD1515  [9]
 LDCM0277  AC18 HEK-293T C254(0.98); C148(1.00)  LDD1516  [9]
 LDCM0278  AC19 HEK-293T C254(0.82)  LDD1517  [9]
 LDCM0279  AC2 HEK-293T C254(0.96); C148(0.60)  LDD1518  [9]
 LDCM0280  AC20 HEK-293T C254(0.98)  LDD1519  [9]
 LDCM0281  AC21 HEK-293T C254(1.21)  LDD1520  [9]
 LDCM0282  AC22 HEK-293T C254(0.94)  LDD1521  [9]
 LDCM0283  AC23 HEK-293T C254(0.98); C234(1.00); C148(0.83)  LDD1522  [9]
 LDCM0284  AC24 HEK-293T C254(1.07)  LDD1523  [9]
 LDCM0285  AC25 HEK-293T C254(0.97); C234(1.00)  LDD1524  [9]
 LDCM0286  AC26 HEK-293T C254(0.98); C148(1.31)  LDD1525  [9]
 LDCM0287  AC27 HEK-293T C254(0.97)  LDD1526  [9]
 LDCM0288  AC28 HEK-293T C254(0.93)  LDD1527  [9]
 LDCM0289  AC29 HEK-293T C254(1.12)  LDD1528  [9]
 LDCM0290  AC3 HEK-293T C254(0.84)  LDD1529  [9]
 LDCM0291  AC30 HEK-293T C254(1.04)  LDD1530  [9]
 LDCM0292  AC31 HEK-293T C254(0.94); C234(0.97); C148(0.89)  LDD1531  [9]
 LDCM0293  AC32 HEK-293T C254(0.95)  LDD1532  [9]
 LDCM0294  AC33 HEK-293T C254(0.92); C234(0.97)  LDD1533  [9]
 LDCM0295  AC34 HEK-293T C254(0.91); C148(1.07)  LDD1534  [9]
 LDCM0296  AC35 HEK-293T C254(0.91)  LDD1535  [9]
 LDCM0297  AC36 HEK-293T C254(0.91)  LDD1536  [9]
 LDCM0298  AC37 HEK-293T C254(0.99)  LDD1537  [9]
 LDCM0299  AC38 HEK-293T C254(0.96)  LDD1538  [9]
 LDCM0300  AC39 HEK-293T C254(0.77); C234(0.92); C148(1.10)  LDD1539  [9]
 LDCM0301  AC4 HEK-293T C254(0.90)  LDD1540  [9]
 LDCM0302  AC40 HEK-293T C254(0.91)  LDD1541  [9]
 LDCM0303  AC41 HEK-293T C254(0.89); C234(1.16)  LDD1542  [9]
 LDCM0304  AC42 HEK-293T C254(0.89); C148(1.05)  LDD1543  [9]
 LDCM0305  AC43 HEK-293T C254(0.84)  LDD1544  [9]
 LDCM0306  AC44 HEK-293T C254(0.92)  LDD1545  [9]
 LDCM0307  AC45 HEK-293T C254(1.00)  LDD1546  [9]
 LDCM0308  AC46 HEK-293T C254(0.96)  LDD1547  [9]
 LDCM0309  AC47 HEK-293T C254(0.79); C234(1.04); C148(1.08)  LDD1548  [9]
 LDCM0310  AC48 HEK-293T C254(0.92)  LDD1549  [9]
 LDCM0311  AC49 HEK-293T C254(0.92); C234(0.91)  LDD1550  [9]
 LDCM0312  AC5 HEK-293T C254(1.12)  LDD1551  [9]
 LDCM0313  AC50 HEK-293T C254(1.01); C148(0.85)  LDD1552  [9]
 LDCM0314  AC51 HEK-293T C254(0.98)  LDD1553  [9]
 LDCM0315  AC52 HEK-293T C254(0.96)  LDD1554  [9]
 LDCM0316  AC53 HEK-293T C254(1.07)  LDD1555  [9]
 LDCM0317  AC54 HEK-293T C254(0.92)  LDD1556  [9]
 LDCM0318  AC55 HEK-293T C254(0.79); C234(1.04); C148(1.25)  LDD1557  [9]
 LDCM0319  AC56 HEK-293T C254(0.93)  LDD1558  [9]
 LDCM0320  AC57 HEK-293T C254(0.95); C234(0.88)  LDD1559  [9]
 LDCM0321  AC58 HEK-293T C254(1.03); C148(0.84)  LDD1560  [9]
 LDCM0322  AC59 HEK-293T C254(0.94)  LDD1561  [9]
 LDCM0323  AC6 HEK-293T C254(0.94)  LDD1562  [9]
 LDCM0324  AC60 HEK-293T C254(0.94)  LDD1563  [9]
 LDCM0325  AC61 HEK-293T C254(1.03)  LDD1564  [9]
 LDCM0326  AC62 HEK-293T C254(0.94)  LDD1565  [9]
 LDCM0327  AC63 HEK-293T C254(0.90); C234(1.05); C148(1.08)  LDD1566  [9]
 LDCM0328  AC64 HEK-293T C254(0.95)  LDD1567  [9]
 LDCM0334  AC7 HEK-293T C254(1.09); C234(0.98); C148(0.88)  LDD1568  [9]
 LDCM0345  AC8 HEK-293T C254(0.90)  LDD1569  [9]
 LDCM0520  AKOS000195272 MDA-MB-231 C254(0.98)  LDD2113  [3]
 LDCM0248  AKOS034007472 HEK-293T C254(1.06)  LDD1511  [9]
 LDCM0356  AKOS034007680 HEK-293T C254(0.90); C234(0.98)  LDD1570  [9]
 LDCM0275  AKOS034007705 HEK-293T C254(1.03)  LDD1514  [9]
 LDCM0367  CL1 HEK-293T C254(1.01)  LDD1571  [9]
 LDCM0368  CL10 HEK-293T C254(0.94)  LDD1572  [9]
 LDCM0369  CL100 HEK-293T C254(0.97)  LDD1573  [9]
 LDCM0370  CL101 HEK-293T C254(0.98)  LDD1574  [9]
 LDCM0371  CL102 HEK-293T C254(0.86)  LDD1575  [9]
 LDCM0372  CL103 HEK-293T C254(0.96)  LDD1576  [9]
 LDCM0373  CL104 HEK-293T C254(0.91)  LDD1577  [9]
 LDCM0374  CL105 HEK-293T C254(0.97)  LDD1578  [9]
 LDCM0375  CL106 HEK-293T C254(0.95)  LDD1579  [9]
 LDCM0376  CL107 HEK-293T C254(1.01)  LDD1580  [9]
 LDCM0377  CL108 HEK-293T C254(0.90)  LDD1581  [9]
 LDCM0378  CL109 HEK-293T C254(0.95)  LDD1582  [9]
 LDCM0379  CL11 HEK-293T C254(0.80); C234(0.99); C148(1.72)  LDD1583  [9]
 LDCM0380  CL110 HEK-293T C254(0.88)  LDD1584  [9]
 LDCM0381  CL111 HEK-293T C254(0.98)  LDD1585  [9]
 LDCM0382  CL112 HEK-293T C254(0.90)  LDD1586  [9]
 LDCM0383  CL113 HEK-293T C254(1.07)  LDD1587  [9]
 LDCM0384  CL114 HEK-293T C254(0.84)  LDD1588  [9]
 LDCM0385  CL115 HEK-293T C254(1.02)  LDD1589  [9]
 LDCM0386  CL116 HEK-293T C254(0.96)  LDD1590  [9]
 LDCM0387  CL117 HEK-293T C254(0.99)  LDD1591  [9]
 LDCM0388  CL118 HEK-293T C254(0.96)  LDD1592  [9]
 LDCM0389  CL119 HEK-293T C254(1.02)  LDD1593  [9]
 LDCM0390  CL12 HEK-293T C254(0.89)  LDD1594  [9]
 LDCM0391  CL120 HEK-293T C254(0.96)  LDD1595  [9]
 LDCM0392  CL121 HEK-293T C254(0.94)  LDD1596  [9]
 LDCM0393  CL122 HEK-293T C254(0.98)  LDD1597  [9]
 LDCM0394  CL123 HEK-293T C254(0.93)  LDD1598  [9]
 LDCM0395  CL124 HEK-293T C254(0.89)  LDD1599  [9]
 LDCM0396  CL125 HEK-293T C254(1.01)  LDD1600  [9]
 LDCM0397  CL126 HEK-293T C254(0.95)  LDD1601  [9]
 LDCM0398  CL127 HEK-293T C254(1.02)  LDD1602  [9]
 LDCM0399  CL128 HEK-293T C254(0.98)  LDD1603  [9]
 LDCM0400  CL13 HEK-293T C254(0.98)  LDD1604  [9]
 LDCM0401  CL14 HEK-293T C254(0.93)  LDD1605  [9]
 LDCM0402  CL15 HEK-293T C254(0.90)  LDD1606  [9]
 LDCM0403  CL16 HEK-293T C254(0.98)  LDD1607  [9]
 LDCM0404  CL17 HEK-293T C254(0.88); C234(1.17)  LDD1608  [9]
 LDCM0405  CL18 HEK-293T C254(0.89); C148(1.14)  LDD1609  [9]
 LDCM0406  CL19 HEK-293T C254(0.91)  LDD1610  [9]
 LDCM0407  CL2 HEK-293T C254(0.86)  LDD1611  [9]
 LDCM0408  CL20 HEK-293T C254(0.96)  LDD1612  [9]
 LDCM0409  CL21 HEK-293T C254(0.98)  LDD1613  [9]
 LDCM0410  CL22 HEK-293T C254(1.02)  LDD1614  [9]
 LDCM0411  CL23 HEK-293T C254(1.02); C234(1.12); C148(0.82)  LDD1615  [9]
 LDCM0412  CL24 HEK-293T C254(1.12)  LDD1616  [9]
 LDCM0413  CL25 HEK-293T C254(1.15)  LDD1617  [9]
 LDCM0414  CL26 HEK-293T C254(0.92)  LDD1618  [9]
 LDCM0415  CL27 HEK-293T C254(0.95)  LDD1619  [9]
 LDCM0416  CL28 HEK-293T C254(1.04)  LDD1620  [9]
 LDCM0417  CL29 HEK-293T C254(0.93); C234(1.15)  LDD1621  [9]
 LDCM0418  CL3 HEK-293T C254(1.03)  LDD1622  [9]
 LDCM0419  CL30 HEK-293T C254(1.00); C148(0.91)  LDD1623  [9]
 LDCM0420  CL31 HEK-293T C254(0.75)  LDD1624  [9]
 LDCM0421  CL32 HEK-293T C254(0.86)  LDD1625  [9]
 LDCM0422  CL33 HEK-293T C254(0.89)  LDD1626  [9]
 LDCM0423  CL34 HEK-293T C254(0.98)  LDD1627  [9]
 LDCM0424  CL35 HEK-293T C254(1.44); C234(0.99); C148(0.83)  LDD1628  [9]
 LDCM0425  CL36 HEK-293T C254(1.05)  LDD1629  [9]
 LDCM0426  CL37 HEK-293T C254(1.02)  LDD1630  [9]
 LDCM0428  CL39 HEK-293T C254(0.87)  LDD1632  [9]
 LDCM0429  CL4 HEK-293T C254(0.88)  LDD1633  [9]
 LDCM0430  CL40 HEK-293T C254(1.00)  LDD1634  [9]
 LDCM0431  CL41 HEK-293T C254(0.91); C234(1.10)  LDD1635  [9]
 LDCM0432  CL42 HEK-293T C254(1.02); C148(1.21)  LDD1636  [9]
 LDCM0433  CL43 HEK-293T C254(0.86)  LDD1637  [9]
 LDCM0434  CL44 HEK-293T C254(0.90)  LDD1638  [9]
 LDCM0435  CL45 HEK-293T C254(0.90)  LDD1639  [9]
 LDCM0436  CL46 HEK-293T C254(1.02)  LDD1640  [9]
 LDCM0437  CL47 HEK-293T C254(1.36); C234(1.05); C148(1.31)  LDD1641  [9]
 LDCM0438  CL48 HEK-293T C254(1.02)  LDD1642  [9]
 LDCM0439  CL49 HEK-293T C254(0.97)  LDD1643  [9]
 LDCM0440  CL5 HEK-293T C254(0.96); C234(1.24)  LDD1644  [9]
 LDCM0441  CL50 HEK-293T C254(0.90)  LDD1645  [9]
 LDCM0443  CL52 HEK-293T C254(0.92)  LDD1646  [9]
 LDCM0444  CL53 HEK-293T C254(0.88); C234(1.30)  LDD1647  [9]
 LDCM0445  CL54 HEK-293T C254(0.82); C148(1.26)  LDD1648  [9]
 LDCM0446  CL55 HEK-293T C254(0.83)  LDD1649  [9]
 LDCM0447  CL56 HEK-293T C254(0.87)  LDD1650  [9]
 LDCM0448  CL57 HEK-293T C254(0.94)  LDD1651  [9]
 LDCM0449  CL58 HEK-293T C254(0.94)  LDD1652  [9]
 LDCM0450  CL59 HEK-293T C254(0.81); C234(1.10); C148(0.81)  LDD1653  [9]
 LDCM0451  CL6 HEK-293T C254(0.86); C148(1.44)  LDD1654  [9]
 LDCM0452  CL60 HEK-293T C254(0.97)  LDD1655  [9]
 LDCM0453  CL61 HEK-293T C254(1.00)  LDD1656  [9]
 LDCM0454  CL62 HEK-293T C254(0.92)  LDD1657  [9]
 LDCM0455  CL63 HEK-293T C254(0.97)  LDD1658  [9]
 LDCM0456  CL64 HEK-293T C254(0.84)  LDD1659  [9]
 LDCM0457  CL65 HEK-293T C254(0.93); C234(1.22)  LDD1660  [9]
 LDCM0458  CL66 HEK-293T C254(0.92); C148(1.30)  LDD1661  [9]
 LDCM0459  CL67 HEK-293T C254(0.73)  LDD1662  [9]
 LDCM0460  CL68 HEK-293T C254(0.89)  LDD1663  [9]
 LDCM0461  CL69 HEK-293T C254(1.08)  LDD1664  [9]
 LDCM0462  CL7 HEK-293T C254(0.88)  LDD1665  [9]
 LDCM0463  CL70 HEK-293T C254(0.94)  LDD1666  [9]
 LDCM0464  CL71 HEK-293T C254(0.94); C234(1.12); C148(1.12)  LDD1667  [9]
 LDCM0465  CL72 HEK-293T C254(1.13)  LDD1668  [9]
 LDCM0466  CL73 HEK-293T C254(0.94)  LDD1669  [9]
 LDCM0467  CL74 HEK-293T C254(0.96)  LDD1670  [9]
 LDCM0469  CL76 HEK-293T C254(0.89)  LDD1672  [9]
 LDCM0470  CL77 HEK-293T C254(0.82); C234(1.34)  LDD1673  [9]
 LDCM0471  CL78 HEK-293T C254(0.92); C148(0.84)  LDD1674  [9]
 LDCM0472  CL79 HEK-293T C254(0.98)  LDD1675  [9]
 LDCM0473  CL8 HEK-293T C254(0.82)  LDD1676  [9]
 LDCM0474  CL80 HEK-293T C254(0.92)  LDD1677  [9]
 LDCM0475  CL81 HEK-293T C254(0.93)  LDD1678  [9]
 LDCM0476  CL82 HEK-293T C254(0.96)  LDD1679  [9]
 LDCM0477  CL83 HEK-293T C254(0.83); C234(0.97); C148(1.46)  LDD1680  [9]
 LDCM0478  CL84 HEK-293T C254(0.90)  LDD1681  [9]
 LDCM0479  CL85 HEK-293T C254(1.01)  LDD1682  [9]
 LDCM0480  CL86 HEK-293T C254(0.98)  LDD1683  [9]
 LDCM0481  CL87 HEK-293T C254(1.06)  LDD1684  [9]
 LDCM0482  CL88 HEK-293T C254(0.88)  LDD1685  [9]
 LDCM0483  CL89 HEK-293T C254(0.97); C234(0.95)  LDD1686  [9]
 LDCM0484  CL9 HEK-293T C254(1.00)  LDD1687  [9]
 LDCM0485  CL90 HEK-293T C254(0.79); C148(0.81)  LDD1688  [9]
 LDCM0486  CL91 HEK-293T C254(0.95)  LDD1689  [9]
 LDCM0487  CL92 HEK-293T C254(0.86)  LDD1690  [9]
 LDCM0488  CL93 HEK-293T C254(0.92)  LDD1691  [9]
 LDCM0489  CL94 HEK-293T C254(0.91)  LDD1692  [9]
 LDCM0490  CL95 HEK-293T C254(0.58); C234(1.27); C148(1.46)  LDD1693  [9]
 LDCM0491  CL96 HEK-293T C254(1.06)  LDD1694  [9]
 LDCM0492  CL97 HEK-293T C254(0.95)  LDD1695  [9]
 LDCM0493  CL98 HEK-293T C254(0.91)  LDD1696  [9]
 LDCM0494  CL99 HEK-293T C254(0.92)  LDD1697  [9]
 LDCM0495  E2913 HEK-293T C254(0.92)  LDD1698  [9]
 LDCM0468  Fragment33 HEK-293T C254(0.98)  LDD1671  [9]
 LDCM0427  Fragment51 HEK-293T C254(0.98)  LDD1631  [9]
 LDCM0179  JZ128 PC-3 N.A.  LDD0462  [2]
 LDCM0022  KB02 HCT 116 C254(1.11)  LDD0080  [4]
 LDCM0023  KB03 HCT 116 C254(1.29)  LDD0081  [4]
 LDCM0024  KB05 HCT 116 C254(1.30)  LDD0082  [4]
 LDCM0497  Nucleophilic fragment 11b MDA-MB-231 C254(1.52)  LDD2090  [3]
 LDCM0499  Nucleophilic fragment 12b MDA-MB-231 C254(0.92)  LDD2092  [3]
 LDCM0500  Nucleophilic fragment 13a MDA-MB-231 C254(0.90)  LDD2093  [3]
 LDCM0504  Nucleophilic fragment 15a MDA-MB-231 C254(0.65)  LDD2097  [3]
 LDCM0506  Nucleophilic fragment 16a MDA-MB-231 C254(0.86)  LDD2099  [3]
 LDCM0507  Nucleophilic fragment 16b MDA-MB-231 C254(0.45)  LDD2100  [3]
 LDCM0508  Nucleophilic fragment 17a MDA-MB-231 C254(0.61)  LDD2101  [3]
 LDCM0511  Nucleophilic fragment 18b MDA-MB-231 C254(0.54)  LDD2104  [3]
 LDCM0512  Nucleophilic fragment 19a MDA-MB-231 C254(1.04)  LDD2105  [3]
 LDCM0513  Nucleophilic fragment 19b MDA-MB-231 C254(0.34)  LDD2106  [3]
 LDCM0514  Nucleophilic fragment 20a MDA-MB-231 C254(0.99)  LDD2107  [3]
 LDCM0515  Nucleophilic fragment 20b MDA-MB-231 C254(0.70)  LDD2108  [3]
 LDCM0518  Nucleophilic fragment 22a MDA-MB-231 C254(1.00)  LDD2111  [3]
 LDCM0521  Nucleophilic fragment 23b MDA-MB-231 C254(0.36)  LDD2114  [3]
 LDCM0522  Nucleophilic fragment 24a MDA-MB-231 C254(0.61)  LDD2115  [3]
 LDCM0526  Nucleophilic fragment 26a MDA-MB-231 C254(1.18)  LDD2119  [3]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C254(1.01)  LDD2125  [3]
 LDCM0534  Nucleophilic fragment 30a MDA-MB-231 C254(0.60)  LDD2127  [3]
 LDCM0536  Nucleophilic fragment 31 MDA-MB-231 C254(0.93)  LDD2129  [3]
 LDCM0540  Nucleophilic fragment 35 MDA-MB-231 C254(0.86)  LDD2133  [3]
 LDCM0542  Nucleophilic fragment 37 MDA-MB-231 C254(1.14)  LDD2135  [3]
 LDCM0543  Nucleophilic fragment 38 MDA-MB-231 C254(0.75)  LDD2136  [3]
 LDCM0544  Nucleophilic fragment 39 MDA-MB-231 C254(1.10)  LDD2137  [3]
 LDCM0546  Nucleophilic fragment 40 MDA-MB-231 C254(0.75)  LDD2140  [3]
 LDCM0547  Nucleophilic fragment 41 MDA-MB-231 C254(0.60)  LDD2141  [3]
 LDCM0550  Nucleophilic fragment 5a MDA-MB-231 C254(1.49)  LDD2144  [3]
 LDCM0551  Nucleophilic fragment 5b MDA-MB-231 C254(1.37)  LDD2145  [3]
 LDCM0559  Nucleophilic fragment 9b MDA-MB-231 C254(1.05)  LDD2153  [3]
 LDCM0021  THZ1 HeLa S3 C148(1.05)  LDD0460  [2]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 5 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Sialidase-4 (NEU4) Glycosyl hydrolase 33 family Q8WWR8
Cathepsin Z (CTSZ) Peptidase C1 family Q9UBR2
Serine/threonine-protein kinase 16 (STK16) Ser/Thr protein kinase family O75716
Tripartite motif-containing protein 42 (TRIM42) TRIM/RBCC family Q8IWZ5
Glutaredoxin-3 (GLRX3) . O76003
Transporter and channel
Click To Hide/Show 5 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Amyloid-beta precursor protein (APP) APP family P05067
Cation channel sperm-associated protein 1 (CATSPER1) Cation channel sperm-associated (TC 1.A.1.19) family Q8NEC5
Occludin (OCLN) ELL/occludin family Q16625
Polycystin-2 (PKD2) Polycystin family Q13563
Sodium channel modifier 1 (SCNM1) . Q9BWG6
Transcription factor
Click To Hide/Show 5 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Doublesex- and mab-3-related transcription factor 3 (DMRT3) DMRT family Q9NQL9
Zinc finger protein 417 (ZNF417) Krueppel C2H2-type zinc-finger protein family Q8TAU3
Zinc finger protein 587 (ZNF587) Krueppel C2H2-type zinc-finger protein family Q96SQ5
Estrogen receptor beta (ESR2) Nuclear hormone receptor family Q92731
SWI/SNF complex subunit SMARCC1 (SMARCC1) SMARCC family Q92922
GPCR
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
P2Y purinoceptor 6 (P2RY6) G-protein coupled receptor 1 family Q15077
Other
Click To Hide/Show 22 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Chordin (CHRD) Chordin family Q9H2X0
Dedicator of cytokinesis protein 2 (DOCK2) DOCK family Q92608
Keratin-associated protein 10-11 (KRTAP10-11) KRTAP type 10 family P60412
Keratin-associated protein 10-9 (KRTAP10-9) KRTAP type 10 family P60411
Keratin-associated protein 4-11 (KRTAP4-11) KRTAP type 4 family Q9BYQ6
Keratin-associated protein 4-2 (KRTAP4-2) KRTAP type 4 family Q9BYR5
Keratin-associated protein 5-6 (KRTAP5-6) KRTAP type 5 family Q6L8G9
Keratin-associated protein 9-2 (KRTAP9-2) KRTAP type 9 family Q9BYQ4
Late cornified envelope protein 2D (LCE2D) LCE family Q5TA82
Late cornified envelope protein 4A (LCE4A) LCE family Q5TA78
Cleavage and polyadenylation specificity factor subunit 6 (CPSF6) RRM CPSF6/7 family Q16630
RNA-binding protein EWS (EWSR1) RRM TET family Q01844
Vacuolar protein sorting-associated protein 37C (VPS37C) VPS37 family A5D8V6
DAZ-associated protein 2 (DAZAP2) . Q15038
Differentially expressed in FDCP 6 homolog (DEF6) . Q9H4E7
Fibroblast growth factor receptor substrate 3 (FRS3) . O43559
FMR1-interacting protein NUFIP2 (NUFIP2) . Q7Z417
Galectin-9C (LGALS9C) . Q6DKI2
Proline-rich protein 13 (PRR13) . Q9NZ81
Protein TFG (TFG) . Q92734
Regulator of G-protein signaling 3 (RGS3) . P49796
Spermatogenesis-associated protein 8 (SPATA8) . Q6RVD6

References

1 Oxidant-Induced Bioconjugation for Protein Labeling in Live Cells. ACS Chem Biol. 2023 Jan 20;18(1):112-122. doi: 10.1021/acschembio.2c00740. Epub 2022 Dec 21.
2 A Chemoproteomic Strategy for Direct and Proteome-Wide Covalent Inhibitor Target-Site Identification. J Am Chem Soc. 2019 Jan 9;141(1):191-203. doi: 10.1021/jacs.8b07911. Epub 2018 Dec 20.
3 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
4 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
5 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
6 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
7 Site-Specific Activity-Based Protein Profiling Using Phosphonate Handles. Mol Cell Proteomics. 2023 Jan;22(1):100455. doi: 10.1016/j.mcpro.2022.100455. Epub 2022 Nov 24.
Mass spectrometry data entry: PXD036569
8 Design and synthesis of minimalist terminal alkyne-containing diazirine photo-crosslinkers and their incorporation into kinase inhibitors for cell- and tissue-based proteome profiling. Angew Chem Int Ed Engl. 2013 Aug 12;52(33):8551-6. doi: 10.1002/anie.201300683. Epub 2013 Jun 10.
9 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402