General Information of Target

Target ID LDTP06369
Target Name Elongin-B (ELOB)
Gene Name ELOB
Gene ID 6923
Synonyms
TCEB2; Elongin-B; EloB; Elongin 18 kDa subunit; RNA polymerase II transcription factor SIII subunit B; SIII p18; Transcription elongation factor B polypeptide 2
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
Sequence
MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC
GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ
Target Bioclass
Other
Subcellular location
Nucleus
Function
SIII, also known as elongin, is a general transcription elongation factor that increases the RNA polymerase II transcription elongation past template-encoded arresting sites. Subunit A is transcriptionally active and its transcription activity is strongly enhanced by binding to the dimeric complex of the SIII regulatory subunits B and C (elongin BC complex). In embryonic stem cells, the elongin BC complex is recruited by EPOP to Polycomb group (PcG) target genes in order generate genomic region that display both active and repressive chromatin properties, an important feature of pluripotent stem cells.; Core component of multiple cullin-RING-based ECS (ElonginB/C-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complexes, which mediate the ubiquitination of target proteins. This includes the von Hippel-Lindau ubiquitination complex CBC(VHL). By binding to BC-box motifs it seems to link target recruitment subunits, like VHL and members of the SOCS box family, to Cullin/RBX1 modules that activate E2 ubiquitination enzymes. As part of a multisubunit ubiquitin ligase complex composed of elongin BC complex (ELOB and ELOC), elongin A/ELOA, RBX1 and CUL5; polyubiquitinates monoubiquitinated POLR2A. A number of ECS complexes (containing either KLHDC2, KLHDC3, KLHDC10, APPBP2, FEM1A, FEM1B or FEM1C as substrate-recognition component) are part of the DesCEND (destruction via C-end degrons) pathway, which recognizes a C-degron located at the extreme C terminus of target proteins, leading to their ubiquitination and degradation. ECS(LRR1) ubiquitinates MCM7 and promotes CMG replisome disassembly by VCP and chromatin extraction during S-phase.
Uniprot ID
Q15370
Ensemble ID
ENST00000262306.11
HGNC ID
HGNC:11619
ChEMBL ID
CHEMBL3301400

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
COLO678 SNV: p.G33A DBIA    Probe Info 

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 20 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
m-APA
 Probe Info 
15.00  LDD0402  [1]
STPyne
 Probe Info 
K46(10.00)  LDD0277  [2]
DBIA
 Probe Info 
C60(1.80)  LDD3310  [3]
BTD
 Probe Info 
C60(1.17)  LDD1700  [4]
AHL-Pu-1
 Probe Info 
C89(2.17)  LDD0169  [5]
4-Iodoacetamidophenylacetylene
 Probe Info 
C89(0.00); C60(0.00)  LDD0038  [6]
IA-alkyne
 Probe Info 
C89(0.00); C60(0.00)  LDD0036  [6]
IPIAA_H
 Probe Info 
N.A.  LDD0030  [7]
IPIAA_L
 Probe Info 
N.A.  LDD0031  [7]
Lodoacetamide azide
 Probe Info 
C89(0.00); C60(0.00)  LDD0037  [6]
ATP probe
 Probe Info 
K28(0.00); K46(0.00)  LDD0035  [8]
IPM
 Probe Info 
N.A.  LDD0025  [9]
JW-RF-010
 Probe Info 
C89(0.00); C60(0.00)  LDD0026  [9]
Compound 10
 Probe Info 
N.A.  LDD2216  [10]
TFBX
 Probe Info 
N.A.  LDD0148  [9]
Acrolein
 Probe Info 
N.A.  LDD0217  [11]
Crotonaldehyde
 Probe Info 
N.A.  LDD0219  [11]
Methacrolein
 Probe Info 
N.A.  LDD0218  [11]
AOyne
 Probe Info 
7.30  LDD0443  [12]
NAIA_5
 Probe Info 
C89(0.00); C60(0.00)  LDD2223  [13]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0548  1-(4-(Benzo[d][1,3]dioxol-5-ylmethyl)piperazin-1-yl)-2-nitroethan-1-one MDA-MB-231 C60(0.61)  LDD2142  [4]
 LDCM0519  1-(6-methoxy-3,4-dihydroquinolin-1(2H)-yl)-2-nitroethan-1-one MDA-MB-231 C60(0.61)  LDD2112  [4]
 LDCM0502  1-(Cyanoacetyl)piperidine MDA-MB-231 C60(0.57)  LDD2095  [4]
 LDCM0537  2-Cyano-N,N-dimethylacetamide MDA-MB-231 C60(1.04)  LDD2130  [4]
 LDCM0524  2-Cyano-N-(2-morpholin-4-yl-ethyl)-acetamide MDA-MB-231 C60(0.97)  LDD2117  [4]
 LDCM0558  2-Cyano-N-phenylacetamide MDA-MB-231 C60(1.16)  LDD2152  [4]
 LDCM0510  3-(4-(Hydroxydiphenylmethyl)piperidin-1-yl)-3-oxopropanenitrile MDA-MB-231 C60(0.90)  LDD2103  [4]
 LDCM0539  3-(4-Isopropylpiperazin-1-yl)-3-oxopropanenitrile MDA-MB-231 C60(1.07)  LDD2132  [4]
 LDCM0538  4-(Cyanoacetyl)morpholine MDA-MB-231 C60(0.65)  LDD2131  [4]
 LDCM0026  4SU-RNA+native RNA HEK-293T C89(2.17)  LDD0169  [5]
 LDCM0214  AC1 HEK-293T C60(1.07); C89(1.00)  LDD1507  [14]
 LDCM0215  AC10 PaTu 8988t C89(1.71)  LDD1094  [15]
 LDCM0226  AC11 PaTu 8988t C89(1.83)  LDD1105  [15]
 LDCM0237  AC12 PaTu 8988t C89(1.21)  LDD1116  [15]
 LDCM0259  AC14 PaTu 8988t C89(1.56)  LDD1138  [15]
 LDCM0270  AC15 PaTu 8988t C89(1.31)  LDD1149  [15]
 LDCM0276  AC17 HEK-293T C60(1.02); C89(1.05)  LDD1515  [14]
 LDCM0277  AC18 HEK-293T C60(1.00); C89(0.99)  LDD1516  [14]
 LDCM0278  AC19 HEK-293T C60(0.96); C89(0.96)  LDD1517  [14]
 LDCM0279  AC2 HEK-293T C60(1.02); C89(1.06)  LDD1518  [14]
 LDCM0280  AC20 HEK-293T C60(1.08); C89(1.02)  LDD1519  [14]
 LDCM0281  AC21 HEK-293T C60(1.11); C89(0.96)  LDD1520  [14]
 LDCM0282  AC22 HEK-293T C60(1.13); C89(1.00)  LDD1521  [14]
 LDCM0283  AC23 HEK-293T C60(1.12); C89(1.05)  LDD1522  [14]
 LDCM0284  AC24 HEK-293T C60(1.04); C89(0.98)  LDD1523  [14]
 LDCM0285  AC25 PaTu 8988t C89(0.88)  LDD1164  [15]
 LDCM0286  AC26 PaTu 8988t C89(0.97)  LDD1165  [15]
 LDCM0287  AC27 PaTu 8988t C89(0.99)  LDD1166  [15]
 LDCM0288  AC28 PaTu 8988t C89(0.87)  LDD1167  [15]
 LDCM0289  AC29 PaTu 8988t C89(0.99)  LDD1168  [15]
 LDCM0290  AC3 HEK-293T C60(0.96); C89(0.96)  LDD1529  [14]
 LDCM0291  AC30 PaTu 8988t C89(1.14)  LDD1170  [15]
 LDCM0292  AC31 PaTu 8988t C89(0.81)  LDD1171  [15]
 LDCM0293  AC32 PaTu 8988t C89(1.08)  LDD1172  [15]
 LDCM0294  AC33 PaTu 8988t C89(1.09)  LDD1173  [15]
 LDCM0295  AC34 PaTu 8988t C89(1.20)  LDD1174  [15]
 LDCM0296  AC35 PaTu 8988t C89(0.92)  LDD1175  [15]
 LDCM0297  AC36 PaTu 8988t C89(1.19)  LDD1176  [15]
 LDCM0298  AC37 PaTu 8988t C89(0.87)  LDD1177  [15]
 LDCM0299  AC38 PaTu 8988t C89(1.18)  LDD1178  [15]
 LDCM0300  AC39 PaTu 8988t C89(1.23)  LDD1179  [15]
 LDCM0301  AC4 HEK-293T C60(1.02); C89(0.95)  LDD1540  [14]
 LDCM0302  AC40 PaTu 8988t C89(1.13)  LDD1181  [15]
 LDCM0303  AC41 PaTu 8988t C89(1.02)  LDD1182  [15]
 LDCM0304  AC42 PaTu 8988t C89(0.98)  LDD1183  [15]
 LDCM0305  AC43 PaTu 8988t C89(0.86)  LDD1184  [15]
 LDCM0306  AC44 PaTu 8988t C89(0.86)  LDD1185  [15]
 LDCM0307  AC45 PaTu 8988t C89(0.65)  LDD1186  [15]
 LDCM0308  AC46 PaTu 8988t C89(1.22)  LDD1187  [15]
 LDCM0309  AC47 PaTu 8988t C89(1.30)  LDD1188  [15]
 LDCM0310  AC48 PaTu 8988t C89(1.63)  LDD1189  [15]
 LDCM0311  AC49 PaTu 8988t C89(1.76)  LDD1190  [15]
 LDCM0312  AC5 HEK-293T C60(1.01); C89(1.08)  LDD1551  [14]
 LDCM0313  AC50 PaTu 8988t C89(1.90)  LDD1192  [15]
 LDCM0314  AC51 PaTu 8988t C89(0.48)  LDD1193  [15]
 LDCM0315  AC52 PaTu 8988t C89(1.58)  LDD1194  [15]
 LDCM0316  AC53 PaTu 8988t C89(1.79)  LDD1195  [15]
 LDCM0317  AC54 PaTu 8988t C89(2.24)  LDD1196  [15]
 LDCM0318  AC55 PaTu 8988t C89(1.56)  LDD1197  [15]
 LDCM0319  AC56 PaTu 8988t C89(1.69)  LDD1198  [15]
 LDCM0320  AC57 HEK-293T C60(1.02); C89(1.03)  LDD1559  [14]
 LDCM0321  AC58 HEK-293T C60(0.99); C89(1.01)  LDD1560  [14]
 LDCM0322  AC59 HEK-293T C60(1.03); C89(0.98)  LDD1561  [14]
 LDCM0323  AC6 PaTu 8988t C89(1.07)  LDD1202  [15]
 LDCM0324  AC60 HEK-293T C60(1.05); C89(0.94)  LDD1563  [14]
 LDCM0325  AC61 HEK-293T C60(0.99); C89(0.94)  LDD1564  [14]
 LDCM0326  AC62 HEK-293T C60(0.98); C89(0.92)  LDD1565  [14]
 LDCM0327  AC63 HEK-293T C60(1.01); C89(1.11)  LDD1566  [14]
 LDCM0328  AC64 HEK-293T C60(1.02); C89(1.01)  LDD1567  [14]
 LDCM0334  AC7 PaTu 8988t C89(1.74)  LDD1213  [15]
 LDCM0345  AC8 PaTu 8988t C89(1.43)  LDD1224  [15]
 LDCM0545  Acetamide MDA-MB-231 C60(0.55)  LDD2138  [4]
 LDCM0520  AKOS000195272 MDA-MB-231 C60(0.66)  LDD2113  [4]
 LDCM0248  AKOS034007472 PaTu 8988t C89(1.92)  LDD1127  [15]
 LDCM0356  AKOS034007680 PaTu 8988t C89(1.60)  LDD1235  [15]
 LDCM0275  AKOS034007705 PaTu 8988t C89(1.59)  LDD1154  [15]
 LDCM0156  Aniline NCI-H1299 12.82  LDD0403  [1]
 LDCM0498  BS-3668 MDA-MB-231 C60(0.56)  LDD2091  [4]
 LDCM0108  Chloroacetamide HeLa N.A.  LDD0222  [11]
 LDCM0367  CL1 HEK-293T C60(0.90); C89(0.85)  LDD1571  [14]
 LDCM0368  CL10 HEK-293T C60(0.81); C89(1.03)  LDD1572  [14]
 LDCM0369  CL100 HEK-293T C60(1.01); C89(0.95)  LDD1573  [14]
 LDCM0370  CL101 PaTu 8988t C89(1.18)  LDD1249  [15]
 LDCM0371  CL102 PaTu 8988t C89(0.89)  LDD1250  [15]
 LDCM0372  CL103 PaTu 8988t C89(1.62)  LDD1251  [15]
 LDCM0373  CL104 PaTu 8988t C89(1.11)  LDD1252  [15]
 LDCM0374  CL105 HEK-293T C60(0.98); C89(1.01)  LDD1578  [14]
 LDCM0375  CL106 HEK-293T C60(1.02); C89(1.00)  LDD1579  [14]
 LDCM0376  CL107 HEK-293T C60(1.02); C89(1.02)  LDD1580  [14]
 LDCM0377  CL108 HEK-293T C60(1.02); C89(0.95)  LDD1581  [14]
 LDCM0378  CL109 HEK-293T C60(1.03); C89(0.97)  LDD1582  [14]
 LDCM0379  CL11 HEK-293T C60(1.11); C89(0.92)  LDD1583  [14]
 LDCM0380  CL110 HEK-293T C60(1.02); C89(0.89)  LDD1584  [14]
 LDCM0381  CL111 HEK-293T C60(1.05); C89(1.05)  LDD1585  [14]
 LDCM0382  CL112 PaTu 8988t C89(0.94)  LDD1261  [15]
 LDCM0383  CL113 PaTu 8988t C89(0.95)  LDD1262  [15]
 LDCM0384  CL114 PaTu 8988t C89(0.88)  LDD1263  [15]
 LDCM0385  CL115 PaTu 8988t C89(0.85)  LDD1264  [15]
 LDCM0386  CL116 PaTu 8988t C89(1.08)  LDD1265  [15]
 LDCM0387  CL117 PaTu 8988t C89(1.28)  LDD1266  [15]
 LDCM0388  CL118 PaTu 8988t C89(0.68)  LDD1267  [15]
 LDCM0389  CL119 PaTu 8988t C89(0.73)  LDD1268  [15]
 LDCM0390  CL12 HEK-293T C60(1.27); C89(1.21)  LDD1594  [14]
 LDCM0391  CL120 PaTu 8988t C89(1.30)  LDD1270  [15]
 LDCM0392  CL121 PaTu 8988t C89(1.27)  LDD1271  [15]
 LDCM0393  CL122 PaTu 8988t C89(1.50)  LDD1272  [15]
 LDCM0394  CL123 PaTu 8988t C89(1.62)  LDD1273  [15]
 LDCM0395  CL124 PaTu 8988t C89(1.87)  LDD1274  [15]
 LDCM0396  CL125 HEK-293T C60(1.06); C89(1.08)  LDD1600  [14]
 LDCM0397  CL126 HEK-293T C60(0.91); C89(0.97)  LDD1601  [14]
 LDCM0398  CL127 HEK-293T C60(0.94); C89(0.96)  LDD1602  [14]
 LDCM0399  CL128 HEK-293T C60(0.95); C89(0.98)  LDD1603  [14]
 LDCM0400  CL13 HEK-293T C60(0.80); C89(0.93)  LDD1604  [14]
 LDCM0401  CL14 HEK-293T C60(0.88); C89(1.01)  LDD1605  [14]
 LDCM0402  CL15 HEK-293T C60(0.85); C89(0.82)  LDD1606  [14]
 LDCM0403  CL16 HEK-293T C60(0.96); C89(1.01)  LDD1607  [14]
 LDCM0404  CL17 HEK-293T C60(0.90); C89(0.91)  LDD1608  [14]
 LDCM0405  CL18 HEK-293T C60(1.01); C89(1.11)  LDD1609  [14]
 LDCM0406  CL19 HEK-293T C60(1.05); C89(1.11)  LDD1610  [14]
 LDCM0407  CL2 HEK-293T C60(0.97); C89(1.12)  LDD1611  [14]
 LDCM0408  CL20 HEK-293T C60(1.01); C89(1.14)  LDD1612  [14]
 LDCM0409  CL21 HEK-293T C60(1.16); C89(1.00)  LDD1613  [14]
 LDCM0410  CL22 HEK-293T C60(1.00); C89(1.30)  LDD1614  [14]
 LDCM0411  CL23 HEK-293T C60(1.15); C89(0.83)  LDD1615  [14]
 LDCM0412  CL24 HEK-293T C60(1.42); C89(1.38)  LDD1616  [14]
 LDCM0413  CL25 HEK-293T C60(1.02); C89(0.97)  LDD1617  [14]
 LDCM0414  CL26 HEK-293T C60(0.98); C89(0.98)  LDD1618  [14]
 LDCM0415  CL27 HEK-293T C60(0.98); C89(1.06)  LDD1619  [14]
 LDCM0416  CL28 HEK-293T C60(1.03); C89(0.99)  LDD1620  [14]
 LDCM0417  CL29 HEK-293T C60(0.92); C89(1.03)  LDD1621  [14]
 LDCM0418  CL3 HEK-293T C60(0.96); C89(0.94)  LDD1622  [14]
 LDCM0419  CL30 HEK-293T C60(1.12); C89(1.00)  LDD1623  [14]
 LDCM0420  CL31 PaTu 8988t C89(1.19)  LDD1299  [15]
 LDCM0421  CL32 PaTu 8988t C89(1.33)  LDD1300  [15]
 LDCM0422  CL33 PaTu 8988t C89(1.38)  LDD1301  [15]
 LDCM0423  CL34 PaTu 8988t C89(1.16)  LDD1302  [15]
 LDCM0424  CL35 PaTu 8988t C89(1.18)  LDD1303  [15]
 LDCM0425  CL36 PaTu 8988t C89(1.06)  LDD1304  [15]
 LDCM0426  CL37 PaTu 8988t C89(1.22)  LDD1305  [15]
 LDCM0428  CL39 PaTu 8988t C89(1.22)  LDD1307  [15]
 LDCM0429  CL4 HEK-293T C60(0.92); C89(0.93)  LDD1633  [14]
 LDCM0430  CL40 PaTu 8988t C89(1.39)  LDD1309  [15]
 LDCM0431  CL41 PaTu 8988t C89(1.28)  LDD1310  [15]
 LDCM0432  CL42 PaTu 8988t C89(1.56)  LDD1311  [15]
 LDCM0433  CL43 PaTu 8988t C89(2.17)  LDD1312  [15]
 LDCM0434  CL44 PaTu 8988t C89(1.40)  LDD1313  [15]
 LDCM0435  CL45 PaTu 8988t C89(1.48)  LDD1314  [15]
 LDCM0436  CL46 HEK-293T C60(1.08); C89(1.41)  LDD1640  [14]
 LDCM0437  CL47 HEK-293T C60(1.26); C89(1.02)  LDD1641  [14]
 LDCM0438  CL48 HEK-293T C60(1.28); C89(1.48)  LDD1642  [14]
 LDCM0439  CL49 HEK-293T C60(1.04); C89(1.02)  LDD1643  [14]
 LDCM0440  CL5 HEK-293T C60(0.93); C89(1.00)  LDD1644  [14]
 LDCM0441  CL50 HEK-293T C60(0.89); C89(1.01)  LDD1645  [14]
 LDCM0443  CL52 HEK-293T C60(0.99); C89(0.97)  LDD1646  [14]
 LDCM0444  CL53 HEK-293T C60(1.08); C89(0.93)  LDD1647  [14]
 LDCM0445  CL54 HEK-293T C60(1.07); C89(0.96)  LDD1648  [14]
 LDCM0446  CL55 HEK-293T C60(1.12); C89(1.08)  LDD1649  [14]
 LDCM0447  CL56 HEK-293T C60(1.01); C89(1.08)  LDD1650  [14]
 LDCM0448  CL57 HEK-293T C60(1.12); C89(1.01)  LDD1651  [14]
 LDCM0449  CL58 HEK-293T C60(1.06); C89(1.25)  LDD1652  [14]
 LDCM0450  CL59 HEK-293T C60(1.17); C89(0.93)  LDD1653  [14]
 LDCM0451  CL6 HEK-293T C60(0.99); C89(0.85)  LDD1654  [14]
 LDCM0452  CL60 HEK-293T C60(1.34); C89(1.41)  LDD1655  [14]
 LDCM0453  CL61 HEK-293T C60(1.10); C89(1.11)  LDD1656  [14]
 LDCM0454  CL62 HEK-293T C60(1.04); C89(1.08)  LDD1657  [14]
 LDCM0455  CL63 HEK-293T C60(0.93); C89(1.11)  LDD1658  [14]
 LDCM0456  CL64 HEK-293T C60(0.93); C89(0.91)  LDD1659  [14]
 LDCM0457  CL65 HEK-293T C60(0.93); C89(1.12)  LDD1660  [14]
 LDCM0458  CL66 HEK-293T C60(1.05); C89(1.10)  LDD1661  [14]
 LDCM0459  CL67 HEK-293T C60(1.14); C89(1.06)  LDD1662  [14]
 LDCM0460  CL68 HEK-293T C60(1.09); C89(1.11)  LDD1663  [14]
 LDCM0461  CL69 HEK-293T C60(1.23); C89(1.31)  LDD1664  [14]
 LDCM0462  CL7 HEK-293T C60(1.03); C89(0.99)  LDD1665  [14]
 LDCM0463  CL70 HEK-293T C60(1.03); C89(1.38)  LDD1666  [14]
 LDCM0464  CL71 HEK-293T C60(1.15); C89(0.89)  LDD1667  [14]
 LDCM0465  CL72 HEK-293T C60(1.36); C89(1.44)  LDD1668  [14]
 LDCM0466  CL73 HEK-293T C60(0.93); C89(0.93)  LDD1669  [14]
 LDCM0467  CL74 HEK-293T C60(1.00); C89(1.08)  LDD1670  [14]
 LDCM0469  CL76 PaTu 8988t C89(0.78)  LDD1348  [15]
 LDCM0470  CL77 PaTu 8988t C89(0.82)  LDD1349  [15]
 LDCM0471  CL78 PaTu 8988t C89(1.05)  LDD1350  [15]
 LDCM0472  CL79 PaTu 8988t C89(0.80)  LDD1351  [15]
 LDCM0473  CL8 HEK-293T C60(0.71); C89(0.71)  LDD1676  [14]
 LDCM0474  CL80 PaTu 8988t C89(0.83)  LDD1353  [15]
 LDCM0475  CL81 PaTu 8988t C89(0.91)  LDD1354  [15]
 LDCM0476  CL82 PaTu 8988t C89(0.70)  LDD1355  [15]
 LDCM0477  CL83 PaTu 8988t C89(1.11)  LDD1356  [15]
 LDCM0478  CL84 PaTu 8988t C89(0.82)  LDD1357  [15]
 LDCM0479  CL85 PaTu 8988t C89(0.83)  LDD1358  [15]
 LDCM0480  CL86 PaTu 8988t C89(1.43)  LDD1359  [15]
 LDCM0481  CL87 PaTu 8988t C89(1.67)  LDD1360  [15]
 LDCM0482  CL88 PaTu 8988t C89(1.07)  LDD1361  [15]
 LDCM0483  CL89 PaTu 8988t C89(1.25)  LDD1362  [15]
 LDCM0484  CL9 HEK-293T C60(1.18); C89(1.07)  LDD1687  [14]
 LDCM0485  CL90 PaTu 8988t C89(1.53)  LDD1364  [15]
 LDCM0486  CL91 HEK-293T C60(1.04); C89(1.08)  LDD1689  [14]
 LDCM0487  CL92 HEK-293T C60(1.01); C89(0.97)  LDD1690  [14]
 LDCM0488  CL93 HEK-293T C60(1.29); C89(0.92)  LDD1691  [14]
 LDCM0489  CL94 HEK-293T C60(1.00); C89(1.19)  LDD1692  [14]
 LDCM0490  CL95 HEK-293T C60(0.99); C89(0.81)  LDD1693  [14]
 LDCM0491  CL96 HEK-293T C60(1.12); C89(1.00)  LDD1694  [14]
 LDCM0492  CL97 HEK-293T C60(1.04); C89(0.96)  LDD1695  [14]
 LDCM0493  CL98 HEK-293T C60(0.94); C89(0.98)  LDD1696  [14]
 LDCM0494  CL99 HEK-293T C60(1.03); C89(0.99)  LDD1697  [14]
 LDCM0495  E2913 HEK-293T C60(0.94); C89(1.01)  LDD1698  [14]
 LDCM0213  Electrophilic fragment 2 MDA-MB-231 C60(1.27)  LDD1702  [4]
 LDCM0625  F8 Ramos C60(0.92); C89(0.81)  LDD2187  [16]
 LDCM0572  Fragment10 Ramos C60(0.78); C89(1.17)  LDD2189  [16]
 LDCM0573  Fragment11 Ramos C60(2.69); C89(4.43)  LDD2190  [16]
 LDCM0574  Fragment12 Ramos C60(0.88); C89(1.47)  LDD2191  [16]
 LDCM0575  Fragment13 Ramos C60(1.67); C89(1.04)  LDD2192  [16]
 LDCM0576  Fragment14 Ramos C60(1.26); C89(1.29)  LDD2193  [16]
 LDCM0579  Fragment20 Ramos C60(0.71); C89(1.43)  LDD2194  [16]
 LDCM0580  Fragment21 Ramos C60(1.53); C89(1.15)  LDD2195  [16]
 LDCM0582  Fragment23 Ramos C60(1.62); C89(0.89)  LDD2196  [16]
 LDCM0578  Fragment27 Ramos C60(1.29); C89(0.86)  LDD2197  [16]
 LDCM0586  Fragment28 Ramos C60(0.66); C89(0.58)  LDD2198  [16]
 LDCM0588  Fragment30 Ramos C60(1.38); C89(1.25)  LDD2199  [16]
 LDCM0589  Fragment31 Ramos C60(1.99); C89(0.97)  LDD2200  [16]
 LDCM0590  Fragment32 Ramos C60(0.69); C89(1.01)  LDD2201  [16]
 LDCM0468  Fragment33 HEK-293T C60(0.95); C89(0.92)  LDD1671  [14]
 LDCM0596  Fragment38 Ramos C60(1.10); C89(0.92)  LDD2203  [16]
 LDCM0566  Fragment4 Ramos C60(0.74)  LDD2184  [16]
 LDCM0427  Fragment51 PaTu 8988t C89(2.04)  LDD1306  [15]
 LDCM0610  Fragment52 Ramos C60(1.25); C89(0.56)  LDD2204  [16]
 LDCM0614  Fragment56 Ramos C60(1.26)  LDD2205  [16]
 LDCM0569  Fragment7 Ramos C60(0.71); C89(2.45)  LDD2186  [16]
 LDCM0571  Fragment9 Ramos C60(0.74); C89(1.61)  LDD2188  [16]
 LDCM0107  IAA HeLa N.A.  LDD0221  [11]
 LDCM0022  KB02 HEK-293T C60(0.99); C89(1.02)  LDD1492  [14]
 LDCM0023  KB03 HEK-293T C60(1.10); C89(1.03)  LDD1497  [14]
 LDCM0024  KB05 COLO792 C60(1.80)  LDD3310  [3]
 LDCM0509  N-(4-bromo-3,5-dimethylphenyl)-2-nitroacetamide MDA-MB-231 C60(0.94)  LDD2102  [4]
 LDCM0528  N-(4-bromophenyl)-2-cyano-N-phenylacetamide MDA-MB-231 C60(0.62)  LDD2121  [4]
 LDCM0109  NEM HeLa N.A.  LDD0224  [11]
 LDCM0496  Nucleophilic fragment 11a MDA-MB-231 C60(1.15)  LDD2089  [4]
 LDCM0497  Nucleophilic fragment 11b MDA-MB-231 C60(1.64)  LDD2090  [4]
 LDCM0500  Nucleophilic fragment 13a MDA-MB-231 C60(1.17)  LDD2093  [4]
 LDCM0504  Nucleophilic fragment 15a MDA-MB-231 C60(0.93)  LDD2097  [4]
 LDCM0506  Nucleophilic fragment 16a MDA-MB-231 C60(1.01)  LDD2099  [4]
 LDCM0507  Nucleophilic fragment 16b MDA-MB-231 C60(0.55)  LDD2100  [4]
 LDCM0508  Nucleophilic fragment 17a MDA-MB-231 C60(0.98)  LDD2101  [4]
 LDCM0511  Nucleophilic fragment 18b MDA-MB-231 C60(0.46)  LDD2104  [4]
 LDCM0513  Nucleophilic fragment 19b MDA-MB-231 C60(0.93)  LDD2106  [4]
 LDCM0514  Nucleophilic fragment 20a MDA-MB-231 C60(1.13)  LDD2107  [4]
 LDCM0515  Nucleophilic fragment 20b MDA-MB-231 C60(0.65)  LDD2108  [4]
 LDCM0516  Nucleophilic fragment 21a MDA-MB-231 C60(0.86)  LDD2109  [4]
 LDCM0518  Nucleophilic fragment 22a MDA-MB-231 C60(1.13)  LDD2111  [4]
 LDCM0521  Nucleophilic fragment 23b MDA-MB-231 C60(0.54)  LDD2114  [4]
 LDCM0522  Nucleophilic fragment 24a MDA-MB-231 C60(0.60)  LDD2115  [4]
 LDCM0526  Nucleophilic fragment 26a MDA-MB-231 C60(2.02)  LDD2119  [4]
 LDCM0527  Nucleophilic fragment 26b MDA-MB-231 C60(0.93)  LDD2120  [4]
 LDCM0530  Nucleophilic fragment 28a MDA-MB-231 C60(1.07)  LDD2123  [4]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C60(0.91)  LDD2125  [4]
 LDCM0534  Nucleophilic fragment 30a MDA-MB-231 C60(1.15)  LDD2127  [4]
 LDCM0535  Nucleophilic fragment 30b MDA-MB-231 C60(1.24)  LDD2128  [4]
 LDCM0536  Nucleophilic fragment 31 MDA-MB-231 C60(1.35)  LDD2129  [4]
 LDCM0540  Nucleophilic fragment 35 MDA-MB-231 C60(0.66)  LDD2133  [4]
 LDCM0541  Nucleophilic fragment 36 MDA-MB-231 C60(0.43)  LDD2134  [4]
 LDCM0542  Nucleophilic fragment 37 MDA-MB-231 C60(1.43)  LDD2135  [4]
 LDCM0543  Nucleophilic fragment 38 MDA-MB-231 C60(1.16)  LDD2136  [4]
 LDCM0211  Nucleophilic fragment 3b MDA-MB-231 C60(1.17)  LDD1700  [4]
 LDCM0546  Nucleophilic fragment 40 MDA-MB-231 C60(1.11)  LDD2140  [4]
 LDCM0547  Nucleophilic fragment 41 MDA-MB-231 C60(0.62)  LDD2141  [4]
 LDCM0549  Nucleophilic fragment 43 MDA-MB-231 C60(1.62)  LDD2143  [4]
 LDCM0550  Nucleophilic fragment 5a MDA-MB-231 C60(2.10)  LDD2144  [4]
 LDCM0552  Nucleophilic fragment 6a MDA-MB-231 C60(1.02)  LDD2146  [4]
 LDCM0553  Nucleophilic fragment 6b MDA-MB-231 C60(3.11)  LDD2147  [4]
 LDCM0554  Nucleophilic fragment 7a MDA-MB-231 C60(0.54)  LDD2148  [4]
 LDCM0556  Nucleophilic fragment 8a MDA-MB-231 C60(0.53)  LDD2150  [4]
 LDCM0559  Nucleophilic fragment 9b MDA-MB-231 C60(2.92)  LDD2153  [4]
 LDCM0131  RA190 MM1.R C89(1.16)  LDD0304  [17]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Other
Click To Hide/Show 3 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Mediator of RNA polymerase II transcription subunit 8 (MED8) Mediator complex subunit 8 family Q96G25
Large ribosomal subunit protein mL53 (MRPL53) Mitochondrion-specific ribosomal protein mL53 family Q96EL3
Elongin-C (ELOC) SKP1 family Q15369

References

1 Quantitative and Site-Specific Chemoproteomic Profiling of Targets of Acrolein. Chem Res Toxicol. 2019 Mar 18;32(3):467-473. doi: 10.1021/acs.chemrestox.8b00343. Epub 2019 Jan 15.
2 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
3 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
4 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
5 Chemoproteomic capture of RNA binding activity in living cells. Nat Commun. 2023 Oct 7;14(1):6282. doi: 10.1038/s41467-023-41844-z.
Mass spectrometry data entry: PXD044625
6 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
7 SP3-Enabled Rapid and High Coverage Chemoproteomic Identification of Cell-State-Dependent Redox-Sensitive Cysteines. Mol Cell Proteomics. 2022 Apr;21(4):100218. doi: 10.1016/j.mcpro.2022.100218. Epub 2022 Feb 25.
Mass spectrometry data entry: PXD029500 , PXD031647
8 Comparison of Quantitative Mass Spectrometry Platforms for Monitoring Kinase ATP Probe Uptake in Lung Cancer. J Proteome Res. 2018 Jan 5;17(1):63-75. doi: 10.1021/acs.jproteome.7b00329. Epub 2017 Nov 22.
Mass spectrometry data entry: PXD006095 , PXD006096
9 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
10 Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling. Anal Chem. 2021 Feb 2;93(4):2610-2618. doi: 10.1021/acs.analchem.0c04726. Epub 2021 Jan 20.
Mass spectrometry data entry: PXD022279
11 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
12 Chemoproteomic profiling of targets of lipid-derived electrophiles by bioorthogonal aminooxy probe. Redox Biol. 2017 Aug;12:712-718. doi: 10.1016/j.redox.2017.04.001. Epub 2017 Apr 5.
13 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
14 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
15 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
16 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
17 Physical and Functional Analysis of the Putative Rpn13 Inhibitor RA190. Cell Chem Biol. 2020 Nov 19;27(11):1371-1382.e6. doi: 10.1016/j.chembiol.2020.08.007. Epub 2020 Aug 27.