General Information of Experiment

Probe Name IA-alkyne  Probe Info 
Probe concentration 100 uM
Criteria Quantification: Probe vs (Probe+Competitor)
Quantitative Method
Isotope tag
Competitor Name Fragment14  Competitor Info 
Competitor Concentration 200 uM
In Vivo Experiment Model Model Type Living cell
Derived Tissue Lymph node
Disease Model Burkitt lymphoma [ICD-11:2A85]
Model Name Human burkitt lymphoma cells (Ramos)

Interaction Altas of This Experiment [1]

Enzyme
Click to Show/Hide to Show 16 Protein Related to This Bioclass
Target ID Target Name Binding Sites Binding Ratio
 LDTP00701  D-3-phosphoglycerate dehydrogenase (PHGDH) C369 20.0
 LDTP00414  Dual specificity mitogen-activated protein kinase kinase 7 (MAP2K7) C131 20.0
 LDTP01055  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 (PFKFB2) C158 14.2
 LDTP12405  Fructose-2,6-bisphosphatase TIGAR (TIGAR) C114 5.1
 LDTP05075  Tubulin alpha-4A chain (TUBA4A) C54 5.1
 LDTP03401  Multifunctional protein CAD (CAD) C73 3.7
 LDTP00601  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit (OGT) C758 2.9
 LDTP00479  Histone acetyltransferase type B catalytic subunit (HAT1) C101 1.9
 LDTP05943  Myotubularin-related protein 1 (MTMR1) C117 1.7
 LDTP12539  DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C) C130 1.4
 LDTP18330  Haloacid dehalogenase-like hydrolase domain-containing 5 (HDHD5) C392 1.1
 LDTP05912  Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (PIN1) C113 1.0
 LDTP03291  Acetyl-CoA acetyltransferase, mitochondrial (ACAT1) C413 0.8
 LDTP03998  3-ketoacyl-CoA thiolase, mitochondrial (ACAA2) C92 0.8
 LDTP02677  Protein disulfide-isomerase A4 (PDIA4) C206 0.7
 LDTP02038  Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) C152 0.6
Transporter and channel
Click to Show/Hide to Show 1 Protein Related to This Bioclass
Target ID Target Name Binding Sites Binding Ratio
 LDTP08769  Nuclear pore complex protein Nup93 (NUP93) C522 20.0
Other
Click to Show/Hide to Show 10 Protein Related to This Bioclass
Target ID Target Name Binding Sites Binding Ratio
 LDTP10843  MMS19 nucleotide excision repair protein homolog (MMS19) C848 20.0
 LDTP06250  Proteasome activator complex subunit 4 (PSME4) C1840 20.0
 LDTP01532  ZW10 interactor (ZWINT) C54 20.0
 LDTP15861  Acyl-CoA-binding domain-containing protein 6 (ACBD6) C267 6.9
 LDTP14250  Cytoplasmic dynein 1 light intermediate chain 1 (DYNC1LI1) C51 4.3
 LDTP12571  LanC-like protein 2 (LANCL2) C187 3.3
 LDTP10781  NudC domain-containing protein 1 (NUDCD1) C376 1.8
 LDTP12669  Mediator of RNA polymerase II transcription subunit 17 (MED17) C649 1.4
 LDTP04952  Heterogeneous nuclear ribonucleoprotein K (HNRNPK) C132 0.9
 LDTP12651  TBC1 domain family member 23 (TBC1D23) C283 0.6

References

1 Proteome-wide covalent ligand discovery in native biological systems. Nature. 2016 Jun 23;534(7608):570-4. doi: 10.1038/nature18002. Epub 2016 Jun 15.