General Information of Target

Target ID LDTP02123
Target Name Protein kinase C beta type (PRKCB)
Gene Name PRKCB
Gene ID 5579
Synonyms
PKCB; PRKCB1; Protein kinase C beta type; PKC-B; PKC-beta; EC 2.7.11.13
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MADPAAGPPPSEGEESTVRFARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIWGF
GKQGFQCQVCCFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGS
LLYGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHTERRGRIYIQAHIDRDVLIVLVRDA
KNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRL
SVEIWDWDLTSRNDFMGSLSFGISELQKASVDGWFKLLSQEEGEYFNVPVPPEGSEANEE
LRQKFERAKISQGTKVPEEKTTNTVSKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSE
RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM
EYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHI
KIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP
FEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF
RYIDWEKLERKEIQPPYKPKARDKRDTSNFDKEFTRQPVELTPTDKLFIMNLDQNEFAGF
SYTNPEFVINV
Target Type
Clinical trial
Target Bioclass
Enzyme
Family
Protein kinase superfamily, AGC Ser/Thr protein kinase family, PKC subfamily
Subcellular location
Cytoplasm
Function
Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase involved in various cellular processes such as regulation of the B-cell receptor (BCR) signalosome, oxidative stress-induced apoptosis, androgen receptor-dependent transcription regulation, insulin signaling and endothelial cells proliferation. Plays a key role in B-cell activation by regulating BCR-induced NF-kappa-B activation. Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11/CARMA1 at 'Ser-559', 'Ser-644' and 'Ser-652'. Phosphorylation induces CARD11/CARMA1 association with lipid rafts and recruitment of the BCL10-MALT1 complex as well as MAP3K7/TAK1, which then activates IKK complex, resulting in nuclear translocation and activation of NFKB1. Plays a direct role in the negative feedback regulation of the BCR signaling, by down-modulating BTK function via direct phosphorylation of BTK at 'Ser-180', which results in the alteration of BTK plasma membrane localization and in turn inhibition of BTK activity. Involved in apoptosis following oxidative damage: in case of oxidative conditions, specifically phosphorylates 'Ser-36' of isoform p66Shc of SHC1, leading to mitochondrial accumulation of p66Shc, where p66Shc acts as a reactive oxygen species producer. Acts as a coactivator of androgen receptor (AR)-dependent transcription, by being recruited to AR target genes and specifically mediating phosphorylation of 'Thr-6' of histone H3 (H3T6ph), a specific tag for epigenetic transcriptional activation that prevents demethylation of histone H3 'Lys-4' (H3K4me) by LSD1/KDM1A. In insulin signaling, may function downstream of IRS1 in muscle cells and mediate insulin-dependent DNA synthesis through the RAF1-MAPK/ERK signaling cascade. Participates in the regulation of glucose transport in adipocytes by negatively modulating the insulin-stimulated translocation of the glucose transporter SLC2A4/GLUT4. Phosphorylates SLC2A1/GLUT1, promoting glucose uptake by SLC2A1/GLUT1. Under high glucose in pancreatic beta-cells, is probably involved in the inhibition of the insulin gene transcription, via regulation of MYC expression. In endothelial cells, activation of PRKCB induces increased phosphorylation of RB1, increased VEGFA-induced cell proliferation, and inhibits PI3K/AKT-dependent nitric oxide synthase (NOS3/eNOS) regulation by insulin, which causes endothelial dysfunction. Also involved in triglyceride homeostasis. Phosphorylates ATF2 which promotes cooperation between ATF2 and JUN, activating transcription. Phosphorylates KLHL3 in response to angiotensin II signaling, decreasing the interaction between KLHL3 and WNK4.
TTD ID
T40276
Uniprot ID
P05771
DrugMap ID
TTYPXQF
Ensemble ID
ENST00000321728.12
HGNC ID
HGNC:9395
ChEMBL ID
CHEMBL3045

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 13 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
TH211
 Probe Info 
Y515(20.00); Y518(20.00)  LDD0260  [1]
BTD
 Probe Info 
C586(1.23); C488(0.93)  LDD2099  [2]
DBIA
 Probe Info 
C572(6.40)  LDD0209  [3]
IPM
 Probe Info 
C586(4.05)  LDD1701  [2]
4-Iodoacetamidophenylacetylene
 Probe Info 
C217(0.00); C386(0.00); C488(0.00); C586(0.00)  LDD0038  [4]
IA-alkyne
 Probe Info 
C217(0.00); C572(0.00); C409(0.00); C132(0.00)  LDD0036  [4]
IPIAA_L
 Probe Info 
N.A.  LDD0031  [5]
Lodoacetamide azide
 Probe Info 
C217(0.00); C386(0.00); C572(0.00); C488(0.00)  LDD0037  [4]
WYneN
 Probe Info 
N.A.  LDD0021  [6]
WYneO
 Probe Info 
N.A.  LDD0022  [6]
TFBX
 Probe Info 
C488(0.00); C502(0.00)  LDD0148  [7]
W1
 Probe Info 
N.A.  LDD0236  [8]
NAIA_5
 Probe Info 
N.A.  LDD2223  [9]
PAL-AfBPP Probe
Click To Hide/Show 4 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
C218
 Probe Info 
13.83  LDD1892  [10]
C361
 Probe Info 
19.16  LDD2022  [10]
FFF probe3
 Probe Info 
6.00  LDD0465  [11]
DA-2
 Probe Info 
N.A.  LDD0070  [12]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0519  1-(6-methoxy-3,4-dihydroquinolin-1(2H)-yl)-2-nitroethan-1-one MDA-MB-231 C586(1.43)  LDD2112  [2]
 LDCM0524  2-Cyano-N-(2-morpholin-4-yl-ethyl)-acetamide MDA-MB-231 C586(0.56); C488(1.19)  LDD2117  [2]
 LDCM0558  2-Cyano-N-phenylacetamide MDA-MB-231 C586(1.36)  LDD2152  [2]
 LDCM0625  F8 Ramos C586(0.95)  LDD2187  [13]
 LDCM0572  Fragment10 Ramos C586(0.50)  LDD2189  [13]
 LDCM0573  Fragment11 Ramos C586(2.19)  LDD2190  [13]
 LDCM0574  Fragment12 Ramos C586(1.03)  LDD2191  [13]
 LDCM0576  Fragment14 Ramos C586(1.22)  LDD2193  [13]
 LDCM0579  Fragment20 Ramos C586(0.59)  LDD2194  [13]
 LDCM0582  Fragment23 Ramos C586(0.69)  LDD2196  [13]
 LDCM0588  Fragment30 Ramos C586(1.54)  LDD2199  [13]
 LDCM0590  Fragment32 Ramos C586(0.69)  LDD2201  [13]
 LDCM0468  Fragment33 Ramos C586(1.20)  LDD2202  [13]
 LDCM0596  Fragment38 Ramos C586(1.37)  LDD2203  [13]
 LDCM0566  Fragment4 Ramos C586(0.54)  LDD2184  [13]
 LDCM0569  Fragment7 Ramos C586(0.75)  LDD2186  [13]
 LDCM0571  Fragment9 Ramos C586(0.47)  LDD2188  [13]
 LDCM0022  KB02 Ramos C586(0.58)  LDD2182  [13]
 LDCM0023  KB03 Jurkat C572(6.40)  LDD0209  [3]
 LDCM0024  KB05 COLO792 C526(2.72); C586(1.65)  LDD3310  [14]
 LDCM0506  Nucleophilic fragment 16a MDA-MB-231 C586(1.23); C488(0.93)  LDD2099  [2]
 LDCM0514  Nucleophilic fragment 20a MDA-MB-231 C586(1.44)  LDD2107  [2]
 LDCM0516  Nucleophilic fragment 21a MDA-MB-231 C586(1.20)  LDD2109  [2]
 LDCM0518  Nucleophilic fragment 22a MDA-MB-231 C586(1.70)  LDD2111  [2]
 LDCM0526  Nucleophilic fragment 26a MDA-MB-231 C586(2.43)  LDD2119  [2]
 LDCM0530  Nucleophilic fragment 28a MDA-MB-231 C586(1.14); C488(1.31)  LDD2123  [2]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C586(1.13); C488(1.00)  LDD2125  [2]
 LDCM0534  Nucleophilic fragment 30a MDA-MB-231 C586(1.23)  LDD2127  [2]
 LDCM0536  Nucleophilic fragment 31 MDA-MB-231 C586(1.01)  LDD2129  [2]
 LDCM0542  Nucleophilic fragment 37 MDA-MB-231 C586(1.62); C488(0.83)  LDD2135  [2]
 LDCM0543  Nucleophilic fragment 38 MDA-MB-231 C586(1.60); C488(1.75)  LDD2136  [2]
 LDCM0544  Nucleophilic fragment 39 MDA-MB-231 C586(1.38)  LDD2137  [2]
 LDCM0546  Nucleophilic fragment 40 MDA-MB-231 C586(1.06)  LDD2140  [2]
 LDCM0550  Nucleophilic fragment 5a MDA-MB-231 C488(2.24)  LDD2144  [2]
 LDCM0552  Nucleophilic fragment 6a MDA-MB-231 C586(1.09)  LDD2146  [2]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 3 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Calcium/calmodulin-dependent protein kinase type II subunit alpha (CAMK2A) CAMK Ser/Thr protein kinase family Q9UQM7
PH domain leucine-rich repeat-containing protein phosphatase 1 (PHLPP1) . O60346
PH domain leucine-rich repeat-containing protein phosphatase 2 (PHLPP2) . Q6ZVD8
Other
Click To Hide/Show 2 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
SHC SH2 domain-binding protein 1 (SHCBP1) . Q8NEM2
TERF1-interacting nuclear factor 2 (TINF2) . Q9BSI4

The Drug(s) Related To This Target

Approved
Click To Hide/Show 7 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
Dequalinium Small molecular drug DB04209
Tamoxifen Small molecular drug DB00675
Vitamin E Small molecular drug DB00163
Alpha-tocopherol Succinate . DB14001
Benzoyl Peroxide . DB09096
Cholecystokinin . DB08862
D-alpha-tocopherol Acetate . DB14002
Phase 3
Click To Hide/Show 2 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
Enzastaurin Small molecular drug D0I6VU
Ruboxistaurin Hydrochloride . D0MV4W
Phase 2
Click To Hide/Show 2 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
Ly333531 Small molecular drug D0W3LI
Sotrastaurin Acetate Small molecular drug D0F5HB
Phase 1
Click To Hide/Show 1 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
Ms-553 . D98VPM
Investigative
Click To Hide/Show 26 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
(-)-cercosporamide Small molecular drug D0L1YA
2,3,3-triphenyl-acrylonitrile Small molecular drug D0S9UK
2-(4-hydroxy-phenyl)-3,3-diphenyl-acrylonitrile Small molecular drug D02QME
3,3-bis-(4-hydroxy-phenyl)-2-phenyl-acrylonitrile Small molecular drug D0T0UH
3,3-bis-(4-methoxy-phenyl)-2-phenyl-acrylonitrile Small molecular drug D0A8MN
3-(1h-indol-3-yl)-4-phenylamino-pyrrole-2,5-dione Small molecular drug D0X2DH
3-(4-hydroxy-phenyl)-2,3-diphenyl-acrylonitrile Small molecular drug D09XIE
4-cycloheptyliden(4-hydroxyphenyl)Methylphenol Small molecular drug D0Q3GQ
4-cyclohexyliden(4-hydroxyphenyl)Methylphenol Small molecular drug D0V9SW
4-cyclopentyliden(4-hydroxyphenyl)Methylphenol Small molecular drug D04OHM
4-[1-(4-hydroxyphenyl)-3-methyl-1-butenyl]Phenol Small molecular drug D02PUV
Ellagic Acid Small molecular drug DB08846
Go 6983 Small molecular drug D06TLL
K00248 Small molecular drug D0H7DQ
Ly-326449 Small molecular drug D06ZCX
O-phosphoethanolamine Small molecular drug D04TBJ
Phosphorylcolamine Small molecular drug DB01738
Prostratin Small molecular drug D04JNZ
Punicafolin Small molecular drug D0Q3XB
Ro-316233 Small molecular drug D0L8HO
Ro-32-0557 Small molecular drug D09TSC
Staurosporine Small molecular drug DB02010
[2,2':5',2'terthiophen-4-yl-methanol Small molecular drug D00TWA
[2,2':5',2'terthiophene-4,5''-dicarbaldehyde Small molecular drug D05LRV
[2,2':5',2'terthiophene-4-carbaldehyde Small molecular drug D0D3MR
Tannin . D0B1SO
Discontinued
Click To Hide/Show 4 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
Balanol Small molecular drug D0R2TM
Linetastine Small molecular drug D0E8UV
Ly-317644 Small molecular drug D0X0HN
Ro-320432 Small molecular drug D0R5ZR

References

1 Chemoproteomic profiling of kinases in live cells using electrophilic sulfonyl triazole probes. Chem Sci. 2021 Jan 21;12(9):3295-3307. doi: 10.1039/d0sc06623k.
2 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
3 Covalent Inhibition by a Natural Product-Inspired Latent Electrophile. J Am Chem Soc. 2023 May 24;145(20):11097-11109. doi: 10.1021/jacs.3c00598. Epub 2023 May 15.
4 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
5 SP3-Enabled Rapid and High Coverage Chemoproteomic Identification of Cell-State-Dependent Redox-Sensitive Cysteines. Mol Cell Proteomics. 2022 Apr;21(4):100218. doi: 10.1016/j.mcpro.2022.100218. Epub 2022 Feb 25.
Mass spectrometry data entry: PXD029500 , PXD031647
6 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
7 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
8 Oxidant-Induced Bioconjugation for Protein Labeling in Live Cells. ACS Chem Biol. 2023 Jan 20;18(1):112-122. doi: 10.1021/acschembio.2c00740. Epub 2022 Dec 21.
9 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
10 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587
11 Ligand and Target Discovery by Fragment-Based Screening in Human Cells. Cell. 2017 Jan 26;168(3):527-541.e29. doi: 10.1016/j.cell.2016.12.029. Epub 2017 Jan 19.
12 Cell-based proteome profiling of potential dasatinib targets by use of affinity-based probes. J Am Chem Soc. 2012 Feb 15;134(6):3001-14. doi: 10.1021/ja208518u. Epub 2012 Feb 1.
13 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578
14 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840