General Information of Target

Target ID LDTP00718
Target Name E3 ubiquitin-protein ligase SIAH2 (SIAH2)
Gene Name SIAH2
Gene ID 6478
Synonyms
E3 ubiquitin-protein ligase SIAH2; EC 2.3.2.27; RING-type E3 ubiquitin transferase SIAH2; Seven in absentia homolog 2; Siah-2; hSiah2
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MSRPSSTGPSANKPCSKQPPPQPQHTPSPAAPPAAATISAAGPGSSAVPAAAAVISGPGG
GGGAGPVSPQHHELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTP
SIRNLAMEKVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGS
LEAVMSHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYE
GHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFD
TAIAHLFADNGNLGINVTISTCCP
Target Bioclass
Enzyme
Family
SINA (Seven in absentia) family
Subcellular location
Cytoplasm
Function
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Mediates E3 ubiquitin ligase activity either through direct binding to substrates or by functioning as the essential RING domain subunit of larger E3 complexes. Triggers the ubiquitin-mediated degradation of many substrates, including proteins involved in transcription regulation (GPS2, POU2AF1, PML, NCOR1), a cell surface receptor (DCC), an antiapoptotic protein (BAG1), and a protein involved in synaptic vesicle function in neurons (SYP). Mediates ubiquitination and proteasomal degradation of DYRK2 in response to hypoxia. It is thereby involved in apoptosis, tumor suppression, cell cycle, transcription and signaling processes. Has some overlapping function with SIAH1. Triggers the ubiquitin-mediated degradation of TRAF2, whereas SIAH1 does not. Promotes monoubiquitination of SNCA. Regulates cellular clock function via ubiquitination of the circadian transcriptional repressors NR1D1 and NR1D2 leading to their proteasomal degradation. Plays an important role in mediating the rhythmic degradation/clearance of NR1D1 and NR1D2 contributing to their circadian profile of protein abundance. Mediates ubiquitination and degradation of EGLN2 and EGLN3 in response to the unfolded protein response (UPR), leading to their degradation and subsequent stabilization of ATF4. Also part of the Wnt signaling pathway in which it mediates the Wnt-induced ubiquitin-mediated proteasomal degradation of AXIN1.
Uniprot ID
O43255
Ensemble ID
ENST00000312960.4
HGNC ID
HGNC:10858

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 4 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
DBIA
 Probe Info 
C138(1.08)  LDD0531  [1]
IA-alkyne
 Probe Info 
N.A.  LDD0166  [2]
VSF
 Probe Info 
N.A.  LDD0007  [3]
NAIA_5
 Probe Info 
C138(0.00); C15(0.00)  LDD2223  [4]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0214  AC1 HCT 116 C138(1.08)  LDD0531  [1]
 LDCM0216  AC100 HCT 116 C138(0.80)  LDD0533  [1]
 LDCM0217  AC101 HCT 116 C138(0.78)  LDD0534  [1]
 LDCM0218  AC102 HCT 116 C138(0.90)  LDD0535  [1]
 LDCM0219  AC103 HCT 116 C138(0.79)  LDD0536  [1]
 LDCM0220  AC104 HCT 116 C138(1.03)  LDD0537  [1]
 LDCM0221  AC105 HCT 116 C138(0.83)  LDD0538  [1]
 LDCM0222  AC106 HCT 116 C138(0.84)  LDD0539  [1]
 LDCM0223  AC107 HCT 116 C138(0.92)  LDD0540  [1]
 LDCM0224  AC108 HCT 116 C138(0.84)  LDD0541  [1]
 LDCM0225  AC109 HCT 116 C138(0.94)  LDD0542  [1]
 LDCM0227  AC110 HCT 116 C138(0.78)  LDD0544  [1]
 LDCM0228  AC111 HCT 116 C138(0.80)  LDD0545  [1]
 LDCM0229  AC112 HCT 116 C138(0.80)  LDD0546  [1]
 LDCM0246  AC128 HCT 116 C138(1.49)  LDD0563  [1]
 LDCM0247  AC129 HCT 116 C138(1.21)  LDD0564  [1]
 LDCM0249  AC130 HCT 116 C138(1.16)  LDD0566  [1]
 LDCM0250  AC131 HCT 116 C138(1.14)  LDD0567  [1]
 LDCM0251  AC132 HCT 116 C138(1.18)  LDD0568  [1]
 LDCM0252  AC133 HCT 116 C138(1.20)  LDD0569  [1]
 LDCM0253  AC134 HCT 116 C138(1.20)  LDD0570  [1]
 LDCM0254  AC135 HCT 116 C138(1.18)  LDD0571  [1]
 LDCM0255  AC136 HCT 116 C138(1.06)  LDD0572  [1]
 LDCM0256  AC137 HCT 116 C138(1.28)  LDD0573  [1]
 LDCM0257  AC138 HCT 116 C138(1.06)  LDD0574  [1]
 LDCM0258  AC139 HCT 116 C138(0.98)  LDD0575  [1]
 LDCM0260  AC140 HCT 116 C138(1.13)  LDD0577  [1]
 LDCM0261  AC141 HCT 116 C138(1.11)  LDD0578  [1]
 LDCM0262  AC142 HCT 116 C138(1.17)  LDD0579  [1]
 LDCM0279  AC2 HCT 116 C138(1.00)  LDD0596  [1]
 LDCM0285  AC25 HCT 116 C138(1.04)  LDD0602  [1]
 LDCM0286  AC26 HCT 116 C138(0.95)  LDD0603  [1]
 LDCM0287  AC27 HCT 116 C138(1.03)  LDD0604  [1]
 LDCM0288  AC28 HCT 116 C138(1.07)  LDD0605  [1]
 LDCM0289  AC29 HCT 116 C138(0.83)  LDD0606  [1]
 LDCM0290  AC3 HCT 116 C138(0.91)  LDD0607  [1]
 LDCM0291  AC30 HCT 116 C138(0.85)  LDD0608  [1]
 LDCM0292  AC31 HCT 116 C138(0.86)  LDD0609  [1]
 LDCM0293  AC32 HCT 116 C138(0.90)  LDD0610  [1]
 LDCM0294  AC33 HCT 116 C138(0.97)  LDD0611  [1]
 LDCM0295  AC34 HCT 116 C138(0.90)  LDD0612  [1]
 LDCM0301  AC4 HCT 116 C138(1.09)  LDD0618  [1]
 LDCM0312  AC5 HCT 116 C138(1.03)  LDD0629  [1]
 LDCM0349  AC83 HCT 116 C138(1.31)  LDD0666  [1]
 LDCM0350  AC84 HCT 116 C138(1.20)  LDD0667  [1]
 LDCM0351  AC85 HCT 116 C138(1.19)  LDD0668  [1]
 LDCM0352  AC86 HCT 116 C138(1.10)  LDD0669  [1]
 LDCM0353  AC87 HCT 116 C138(1.10)  LDD0670  [1]
 LDCM0354  AC88 HCT 116 C138(1.02)  LDD0671  [1]
 LDCM0355  AC89 HCT 116 C138(1.19)  LDD0672  [1]
 LDCM0357  AC90 HCT 116 C138(1.01)  LDD0674  [1]
 LDCM0358  AC91 HCT 116 C138(1.27)  LDD0675  [1]
 LDCM0359  AC92 HCT 116 C138(1.24)  LDD0676  [1]
 LDCM0360  AC93 HCT 116 C138(1.23)  LDD0677  [1]
 LDCM0361  AC94 HCT 116 C138(1.31)  LDD0678  [1]
 LDCM0362  AC95 HCT 116 C138(1.02)  LDD0679  [1]
 LDCM0363  AC96 HCT 116 C138(1.30)  LDD0680  [1]
 LDCM0364  AC97 HCT 116 C138(1.07)  LDD0681  [1]
 LDCM0365  AC98 HCT 116 C138(0.72)  LDD0682  [1]
 LDCM0366  AC99 HCT 116 C138(0.87)  LDD0683  [1]
 LDCM0632  CL-Sc Hep-G2 C138(20.00); C15(0.95)  LDD2227  [4]
 LDCM0369  CL100 HCT 116 C138(1.01)  LDD0686  [1]
 LDCM0382  CL112 HCT 116 C138(0.89)  LDD0699  [1]
 LDCM0383  CL113 HCT 116 C138(0.84)  LDD0700  [1]
 LDCM0384  CL114 HCT 116 C138(0.79)  LDD0701  [1]
 LDCM0385  CL115 HCT 116 C138(0.91)  LDD0702  [1]
 LDCM0386  CL116 HCT 116 C138(0.92)  LDD0703  [1]
 LDCM0403  CL16 HCT 116 C138(0.90)  LDD0720  [1]
 LDCM0420  CL31 HCT 116 C138(0.99)  LDD0737  [1]
 LDCM0421  CL32 HCT 116 C138(0.93)  LDD0738  [1]
 LDCM0422  CL33 HCT 116 C138(0.96)  LDD0739  [1]
 LDCM0423  CL34 HCT 116 C138(0.98)  LDD0740  [1]
 LDCM0424  CL35 HCT 116 C138(1.06)  LDD0741  [1]
 LDCM0425  CL36 HCT 116 C138(0.93)  LDD0742  [1]
 LDCM0426  CL37 HCT 116 C138(1.06)  LDD0743  [1]
 LDCM0428  CL39 HCT 116 C138(0.97)  LDD0745  [1]
 LDCM0430  CL40 HCT 116 C138(0.98)  LDD0747  [1]
 LDCM0431  CL41 HCT 116 C138(0.90)  LDD0748  [1]
 LDCM0432  CL42 HCT 116 C138(1.04)  LDD0749  [1]
 LDCM0433  CL43 HCT 116 C138(1.10)  LDD0750  [1]
 LDCM0434  CL44 HCT 116 C138(0.87)  LDD0751  [1]
 LDCM0435  CL45 HCT 116 C138(0.94)  LDD0752  [1]
 LDCM0486  CL91 HCT 116 C138(0.94)  LDD0803  [1]
 LDCM0487  CL92 HCT 116 C138(0.85)  LDD0804  [1]
 LDCM0488  CL93 HCT 116 C138(0.91)  LDD0805  [1]
 LDCM0489  CL94 HCT 116 C138(1.22)  LDD0806  [1]
 LDCM0490  CL95 HCT 116 C138(0.86)  LDD0807  [1]
 LDCM0491  CL96 HCT 116 C138(0.81)  LDD0808  [1]
 LDCM0492  CL97 HCT 116 C138(0.92)  LDD0809  [1]
 LDCM0493  CL98 HCT 116 C138(1.07)  LDD0810  [1]
 LDCM0494  CL99 HCT 116 C138(0.92)  LDD0811  [1]
 LDCM0427  Fragment51 HCT 116 C138(0.91)  LDD0744  [1]
 LDCM0022  KB02 786-O C138(2.16)  LDD2247  [5]
 LDCM0023  KB03 786-O C138(3.08)  LDD2664  [5]
 LDCM0024  KB05 NALM-6 C138(1.90)  LDD3339  [5]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 3 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Serine/threonine-protein kinase LATS1 (LATS1) AGC Ser/Thr protein kinase family O95835
Serine/threonine-protein kinase LATS2 (LATS2) AGC Ser/Thr protein kinase family Q9NRM7
E3 ubiquitin-protein ligase SH3RF1 (SH3RF1) SH3RF family Q7Z6J0
GPCR
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Mu-type opioid receptor (OPRM1) G-protein coupled receptor 1 family P35372

References

1 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
2 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
3 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
4 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
5 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840