General Information of Target

Target ID LDTP10104
Target Name Interferon-stimulated gene 20 kDa protein (ISG20)
Gene Name ISG20
Gene ID 3669
Synonyms
HEM45; Interferon-stimulated gene 20 kDa protein; EC 3.1.13.1; Estrogen-regulated transcript 45 protein; Promyelocytic leukemia nuclear body-associated protein ISG20
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MADPGPDPESESESVFPREVGLFADSYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAA
LSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGGDVTITDLPLALEQIQGNVQANV
PAGGQAQVRALSWGIDHHVFPANYDLVLGADIVYLEPTFPLLLGTLQHLCRPHGTIYLAS
KMRKEHGTESFFQHLLPQHFQLELAQRDEDENVNIYRARHREPRPA
Target Bioclass
Enzyme
Family
Exonuclease superfamily
Subcellular location
Nucleus
Function
Interferon-induced antiviral exoribonuclease that acts mainly on single-stranded RNA. Exhibits antiviral activity against RNA viruses including hepatitis C virus (HCV), hepatitis A virus (HAV) and yellow fever virus (YFV). Inhibition of several viruses such as chikungunya virus (CHIKV) does not involve the degradation of viral RNAs, but rather the inhibition of translation of viral proteins. Exerts a translational control over a large panel of non-self RNA substrates while sparing endogenous transcripts. This activity correlates with the protein's ability to localize in cytoplasmic processing bodies. May also act as master regulator of over hundred interferon stimulated genes leading to viral genome translation inhibition. May play additional roles in the maturation of snRNAs and rRNAs, and in ribosome biogenesis.
Uniprot ID
Q96AZ6
Ensemble ID
ENST00000306072.10
HGNC ID
HGNC:6130

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
HT1376 SNV: p.D51Y .
JHH7 SNV: p.A26V .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 4 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
Probe 1
 Probe Info 
Y108(15.51); Y162(6.47)  LDD3495  [1]
EA-probe
 Probe Info 
N.A.  LDD0440  [2]
IA-alkyne
 Probe Info 
N.A.  LDD0162  [3]
NAIA_5
 Probe Info 
C28(0.00); C12(0.00)  LDD2223  [4]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0175  Ethacrynic acid HeLa N.A.  LDD0440  [2]
 LDCM0625  F8 Ramos C12(0.49)  LDD2187  [5]
 LDCM0572  Fragment10 Ramos C12(0.52)  LDD2189  [5]
 LDCM0573  Fragment11 Ramos C12(0.62)  LDD2190  [5]
 LDCM0574  Fragment12 Ramos C12(2.83)  LDD2191  [5]
 LDCM0576  Fragment14 Ramos C12(0.70)  LDD2193  [5]
 LDCM0586  Fragment28 Ramos C12(1.04)  LDD2198  [5]
 LDCM0588  Fragment30 Ramos C12(0.64)  LDD2199  [5]
 LDCM0590  Fragment32 Ramos C12(0.57)  LDD2201  [5]
 LDCM0468  Fragment33 Ramos C12(0.74)  LDD2202  [5]
 LDCM0596  Fragment38 Ramos C12(0.70)  LDD2203  [5]
 LDCM0566  Fragment4 Ramos C12(0.72)  LDD2184  [5]
 LDCM0610  Fragment52 Ramos C12(0.72)  LDD2204  [5]
 LDCM0569  Fragment7 Ramos C12(0.46)  LDD2186  [5]
 LDCM0022  KB02 Ramos C12(0.37)  LDD2182  [5]
 LDCM0023  KB03 Ramos C12(0.53)  LDD2183  [5]
 LDCM0024  KB05 Ramos C12(0.30)  LDD2185  [5]

The Interaction Atlas With This Target

The Drug(s) Related To This Target

Investigative
Click To Hide/Show 1 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
Uridine Monophosphate Small molecular drug DB03685

References

1 An Azo Coupling-Based Chemoproteomic Approach to Systematically Profile the Tyrosine Reactivity in the Human Proteome. Anal Chem. 2021 Jul 27;93(29):10334-10342. doi: 10.1021/acs.analchem.1c01935. Epub 2021 Jul 12.
2 Chemoproteomic Profiling Reveals Ethacrynic Acid Targets Adenine Nucleotide Translocases to Impair Mitochondrial Function. Mol Pharm. 2018 Jun 4;15(6):2413-2422. doi: 10.1021/acs.molpharmaceut.8b00250. Epub 2018 May 15.
3 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
4 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
5 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578