General Information of Target

Target ID LDTP02453
Target Name Tubulin alpha-3D chain (TUBA3D)
Gene Name TUBA3D
Gene ID 113457
Synonyms
Tubulin alpha-3D chain; EC 3.6.5.-; Alpha-tubulin 3D) [Cleaved into: Detyrosinated tubulin alpha-3D chain]
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
Target Bioclass
Enzyme
Family
Tubulin family
Subcellular location
Cytoplasm, cytoskeleton
Function
Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
Uniprot ID
P0DPH8
Ensemble ID
ENST00000321253.7
HGNC ID
HGNC:24071

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 2 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
IA-alkyne
 Probe Info 
C347(0.85); C347(0.74)  LDD2206  [1]
Acrolein
 Probe Info 
H393(0.00); H88(0.00)  LDD0217  [2]
PAL-AfBPP Probe
Click To Hide/Show 3 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
BD-F
 Probe Info 
N356(0.00); I355(0.00); F255(0.00); Q256(0.00)  LDD0024  [3]
LD-F
 Probe Info 
C295(0.00); E297(0.00); I355(0.00); V375(0.00)  LDD0015  [3]
TM-F
 Probe Info 
Q256(0.00); E254(0.00); T253(0.00)  LDD0020  [3]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0108  Chloroacetamide HeLa H393(0.00); H88(0.00)  LDD0222  [2]
 LDCM0107  IAA HeLa N.A.  LDD0221  [2]
 LDCM0109  NEM HeLa H393(0.00); H88(0.00)  LDD0223  [2]
 LDCM0627  NUDT7-COV-1 HEK-293T C347(0.85); C347(0.74)  LDD2206  [1]
 LDCM0628  OTUB2-COV-1 HEK-293T C20(15.00); C25(15.00); C20(1.06); C347(0.84)  LDD2207  [1]

References

1 Rapid Covalent-Probe Discovery by Electrophile-Fragment Screening. J Am Chem Soc. 2019 Jun 5;141(22):8951-8968. doi: 10.1021/jacs.9b02822. Epub 2019 May 22.
2 ACR-Based Probe for the Quantitative Profiling of Histidine Reactivity in the Human Proteome. J Am Chem Soc. 2023 Mar 8;145(9):5252-5260. doi: 10.1021/jacs.2c12653. Epub 2023 Feb 27.
3 Evaluation of fully-functionalized diazirine tags for chemical proteomic applications. Chem Sci. 2021 May 7;12(22):7839-7847. doi: 10.1039/d1sc01360b.
Mass spectrometry data entry: PXD025652