General Information of Target

Target ID LDTP06086
Target Name Lymphocyte antigen 6D (LY6D)
Gene Name LY6D
Gene ID 8581
Synonyms
E48; Lymphocyte antigen 6D; Ly-6D; E48 antigen
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MRTALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNTVEPLRGNLVK
KDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSLGLALSLL
AVILAPSL
Target Type
Literature-reported
Target Bioclass
Other
Subcellular location
Cell membrane
Function May act as a specification marker at earliest stage specification of lymphocytes between B- and T-cell development. Marks the earliest stage of B-cell specification.
TTD ID
T03317
Uniprot ID
Q14210
DrugMap ID
TTINE9B
Ensemble ID
ENST00000301263.5
HGNC ID
HGNC:13348

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 4 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
OPA-S-S-alkyne
 Probe Info 
K46(1.33)  LDD3494  [1]
AF-1
 Probe Info 
10.00  LDD0421  [2]
AF-2
 Probe Info 
10.00  LDD0422  [2]
DBIA
 Probe Info 
C38(1.66)  LDD2418  [3]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0166  Afatinib A431 10.00  LDD0421  [2]
 LDCM0022  KB02 KMCH-1 C38(1.66)  LDD2418  [3]
 LDCM0023  KB03 KMCH-1 C38(2.17)  LDD2835  [3]
 LDCM0024  KB05 ICC20 C38(1.98)  LDD3221  [3]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 2 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Very long chain fatty acid elongase 4 (ELOVL4) ELO family Q9GZR5
Lysoplasmalogenase TMEM86B (TMEM86B) TMEM86 family Q8N661
Transporter and channel
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Aquaporin-6 (AQP6) MIP/aquaporin (TC 1.A.8) family Q13520

References

1 A chemical proteomics approach for global mapping of functional lysines on cell surface of living cell. Nat Commun. 2024 Apr 8;15(1):2997. doi: 10.1038/s41467-024-47033-w.
Mass spectrometry data entry: PXD042888
2 Minimalist linkers suitable for irreversible inhibitors in simultaneous proteome profiling, live-cell imaging and drug screening. Chem Commun (Camb). 2019 Jan 15;55(6):834-837. doi: 10.1039/c8cc08685k.
3 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840