General Information of Target

Target ID LDTP02915
Target Name Neuromodulin (GAP43)
Gene Name GAP43
Gene ID 2596
Synonyms
Neuromodulin; Axonal membrane protein GAP-43; Growth-associated protein 43; Neural phosphoprotein B-50; pp46
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MLCCMRRTKQVEKNDDDQKIEQDGIKPEDKAHKAATKIQASFRGHITRKKLKGEKKDDVQ
AAEAEANKKDEAPVADGVEKKGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGDAAT
EQAAPQAPASSEEKAGSAETESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAAT
TPAAEDAAAKATAQPPTETGESSQAEENIEAVDETKPKESARQDEGKEEEPEADQEHA
Target Type
Literature-reported
Target Bioclass
Transporter and channel
Family
Neuromodulin family
Subcellular location
Cell membrane
Function This protein is associated with nerve growth. It is a major component of the motile 'growth cones' that form the tips of elongating axons. Plays a role in axonal and dendritic filopodia induction.
TTD ID
T93966
Uniprot ID
P17677
DrugMap ID
TTSGLN5
Ensemble ID
ENST00000305124.11
HGNC ID
HGNC:4140

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
AN3CA Insertion: p.E115GfsTer3 .
CAL33 SNV: p.N150Y .
HCT15 SNV: p.R43H .
HT115 SNV: p.E228Ter .
JHH7 SNV: p.E115D .
MCC13 SNV: p.S96F .
NALM6 SNV: p.A159P .
RKO Deletion: p.Q126RfsTer84 .
SKMEL24 SNV: p.P108S .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 4 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
DAyne
 Probe Info 
2.29  LDD0261  [1]
IA-alkyne
 Probe Info 
N.A.  LDD0174  [2]
VSF
 Probe Info 
N.A.  LDD0007  [3]
Phosphinate-6
 Probe Info 
N.A.  LDD0018  [4]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Protein kinase C delta type (PRKCD) AGC Ser/Thr protein kinase family Q05655
GPCR
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
D(4) dopamine receptor (DRD4) G-protein coupled receptor 1 family P21917

References

1 Proteome-Wide Profiling of Cellular Targets Modified by Dopamine Metabolites Using a Bio-Orthogonally Functionalized Catecholamine. ACS Chem Biol. 2021 Nov 19;16(11):2581-2594. doi: 10.1021/acschembio.1c00629. Epub 2021 Nov 2.
2 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
3 A modification-centric assessment tool for the performance of chemoproteomic probes. Nat Chem Biol. 2022 Aug;18(8):904-912. doi: 10.1038/s41589-022-01074-8. Epub 2022 Jul 21.
Mass spectrometry data entry: PXD027758 , PXD027755 , PXD027760 , PXD027762 , PXD027756 , PXD027591 , PXD007149 , PXD030064 , PXD032392 , PXD027789 , PXD027767 , PXD027764
4 DFT-Guided Discovery of Ethynyl-Triazolyl-Phosphinates as Modular Electrophiles for Chemoselective Cysteine Bioconjugation and Profiling. Angew Chem Int Ed Engl. 2022 Oct 10;61(41):e202205348. doi: 10.1002/anie.202205348. Epub 2022 Aug 22.
Mass spectrometry data entry: PXD033004