General Information of Target

Target ID LDTP01244
Target Name Tumor necrosis factor receptor superfamily member 21 (TNFRSF21)
Gene Name TNFRSF21
Gene ID 27242
Synonyms
DR6; Tumor necrosis factor receptor superfamily member 21; Death receptor 6; CD antigen CD358
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MGTSPSSSTALASCSRIARRATATMIAGSLLLLGFLSTTTAQPEQKASNLIGTYRHVDRA
TGQVLTCDKCPAGTYVSEHCTNTSLRVCSSCPVGTFTRHENGIEKCHDCSQPCPWPMIEK
LPCAALTDRECTCPPGMFQSNATCAPHTVCPVGWGVRKKGTETEDVRCKQCARGTFSDVP
SSVMKCKAYTDCLSQNLVVIKPGTKETDNVCGTLPSFSSSTSPSPGTAIFPRPEHMETHE
VPSSTYVPKGMNSTESNSSASVRPKVLSSIQEGTVPDNTSSARGKEDVNKTLPNLQVVNH
QQGPHHRHILKLLPSMEATGGEKSSTPIKGPKRGHPRQNLHKHFDINEHLPWMIVLFLLL
VLVVIVVCSIRKSSRTLKKGPRQDPSAIVEKAGLKKSMTPTQNREKWIYYCNGHGIDILK
LVAAQVGSQWKDIYQFLCNASEREVAAFSNGYTADHERAYAALQHWTIRGPEASLAQLIS
ALRQHRRNDVVEKIRGLMEDTTQLETDKLALPMSPSPLSPSPIPSPNAKLENSALLTVEP
SPQDKNKGFFVDESEPLLRCDSTSSGSSALSRNGSFITKEKKDTVLRQVRLDPCDLQPIF
DDMLHFLNPEELRVIEEIPQAEDKLDRLFEIIGVKSQEASQTLLDSVYSHLPDLL
Target Type
Literature-reported
Target Bioclass
Cytokine and receptor
Subcellular location
Cell membrane
Function
Promotes apoptosis, possibly via a pathway that involves the activation of NF-kappa-B. Can also promote apoptosis mediated by BAX and by the release of cytochrome c from the mitochondria into the cytoplasm. Plays a role in neuronal apoptosis, including apoptosis in response to amyloid peptides derived from APP, and is required for both normal cell body death and axonal pruning. Trophic-factor deprivation triggers the cleavage of surface APP by beta-secretase to release sAPP-beta which is further cleaved to release an N-terminal fragment of APP (N-APP). N-APP binds TNFRSF21; this triggers caspase activation and degeneration of both neuronal cell bodies (via caspase-3) and axons (via caspase-6). Negatively regulates oligodendrocyte survival, maturation and myelination. Plays a role in signaling cascades triggered by stimulation of T-cell receptors, in the adaptive immune response and in the regulation of T-cell differentiation and proliferation. Negatively regulates T-cell responses and the release of cytokines such as IL4, IL5, IL10, IL13 and IFNG by Th2 cells. Negatively regulates the production of IgG, IgM and IgM in response to antigens. May inhibit the activation of JNK in response to T-cell stimulation. Also acts as a regulator of pyroptosis: recruits CASP8 in response to reactive oxygen species (ROS) and subsequent oxidation, leading to activation of GSDMC.
TTD ID
T64744
Uniprot ID
O75509
DrugMap ID
TT8UA0T
Ensemble ID
ENST00000296861.2
HGNC ID
HGNC:13469

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 3 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
STPyne
 Probe Info 
K493(10.00)  LDD0277  [1]
DBIA
 Probe Info 
C560(0.88)  LDD3312  [2]
NAIA_4
 Probe Info 
C438(0.00); C560(0.00); C594(0.00)  LDD2226  [3]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0215  AC10 HEK-293T C594(1.12); C560(0.62)  LDD1508  [4]
 LDCM0237  AC12 HEK-293T C560(1.03)  LDD1510  [4]
 LDCM0270  AC15 HEK-293T C411(1.10)  LDD1513  [4]
 LDCM0277  AC18 HEK-293T C594(0.88); C560(0.80)  LDD1516  [4]
 LDCM0279  AC2 HEK-293T C594(1.05); C560(0.81)  LDD1518  [4]
 LDCM0280  AC20 HEK-293T C560(1.21)  LDD1519  [4]
 LDCM0283  AC23 HEK-293T C411(1.07)  LDD1522  [4]
 LDCM0286  AC26 HEK-293T C594(0.92); C560(0.87)  LDD1525  [4]
 LDCM0288  AC28 HEK-293T C560(0.87)  LDD1527  [4]
 LDCM0292  AC31 HEK-293T C411(0.87)  LDD1531  [4]
 LDCM0295  AC34 HEK-293T C594(1.16); C560(1.10)  LDD1534  [4]
 LDCM0297  AC36 HEK-293T C560(1.13)  LDD1536  [4]
 LDCM0300  AC39 HEK-293T C411(1.08)  LDD1539  [4]
 LDCM0301  AC4 HEK-293T C560(0.73)  LDD1540  [4]
 LDCM0304  AC42 HEK-293T C594(1.00); C560(0.83)  LDD1543  [4]
 LDCM0306  AC44 HEK-293T C560(0.86)  LDD1545  [4]
 LDCM0309  AC47 HEK-293T C411(1.02)  LDD1548  [4]
 LDCM0313  AC50 HEK-293T C594(1.25); C560(0.74)  LDD1552  [4]
 LDCM0315  AC52 HEK-293T C560(1.07)  LDD1554  [4]
 LDCM0318  AC55 HEK-293T C411(1.14)  LDD1557  [4]
 LDCM0321  AC58 HEK-293T C594(0.98); C560(0.70)  LDD1560  [4]
 LDCM0324  AC60 HEK-293T C560(0.78)  LDD1563  [4]
 LDCM0327  AC63 HEK-293T C411(0.98)  LDD1566  [4]
 LDCM0334  AC7 HEK-293T C411(1.01)  LDD1568  [4]
 LDCM0379  CL11 HEK-293T C411(1.30)  LDD1583  [4]
 LDCM0405  CL18 HEK-293T C594(0.87); C560(1.01)  LDD1609  [4]
 LDCM0408  CL20 HEK-293T C560(1.41)  LDD1612  [4]
 LDCM0411  CL23 HEK-293T C411(1.09)  LDD1615  [4]
 LDCM0419  CL30 HEK-293T C594(1.12); C560(1.17)  LDD1623  [4]
 LDCM0421  CL32 HEK-293T C560(1.54)  LDD1625  [4]
 LDCM0424  CL35 HEK-293T C411(1.14)  LDD1628  [4]
 LDCM0432  CL42 HEK-293T C594(0.98); C560(0.69)  LDD1636  [4]
 LDCM0434  CL44 HEK-293T C560(1.33)  LDD1638  [4]
 LDCM0437  CL47 HEK-293T C411(1.14)  LDD1641  [4]
 LDCM0445  CL54 HEK-293T C594(0.95); C560(0.98)  LDD1648  [4]
 LDCM0447  CL56 HEK-293T C560(1.91)  LDD1650  [4]
 LDCM0450  CL59 HEK-293T C411(1.04)  LDD1653  [4]
 LDCM0451  CL6 HEK-293T C594(1.01); C560(0.77)  LDD1654  [4]
 LDCM0458  CL66 HEK-293T C594(1.04); C560(1.36)  LDD1661  [4]
 LDCM0460  CL68 HEK-293T C560(1.21)  LDD1663  [4]
 LDCM0464  CL71 HEK-293T C411(1.10)  LDD1667  [4]
 LDCM0471  CL78 HEK-293T C594(1.06); C560(0.83)  LDD1674  [4]
 LDCM0473  CL8 HEK-293T C560(0.93)  LDD1676  [4]
 LDCM0474  CL80 HEK-293T C560(1.14)  LDD1677  [4]
 LDCM0477  CL83 HEK-293T C411(1.15)  LDD1680  [4]
 LDCM0485  CL90 HEK-293T C594(1.24); C560(0.67)  LDD1688  [4]
 LDCM0487  CL92 HEK-293T C560(0.91)  LDD1690  [4]
 LDCM0490  CL95 HEK-293T C411(1.43)  LDD1693  [4]
 LDCM0022  KB02 BxPC-3 C560(1.92); C594(1.02)  LDD2280  [2]
 LDCM0023  KB03 BxPC-3 C560(2.34)  LDD2697  [2]
 LDCM0024  KB05 HMCB C560(0.88)  LDD3312  [2]

References

1 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
2 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
3 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264
4 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402