General Information of Probe

Probe ID
LDPC0525
Probe Name
C295
Synonyms
Z4282860197
Probe Type
PAL-AfBPP Probe
Structure
3D MOL 2D MOL
Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 343.4
Lipid-water partition coefficient (xlogp) 1.4
Rotatable Bond Count (rotbonds) 6
Hydrogen Bond Donor Count (hbonddonor) 0
Hydrogen Bond Acceptor Count (hbondacc) 4
Chemical Identifiers
Formula
C18H22N3O2P
IUPAC Name
3-(3-but-3-ynyldiazirin-3-yl)-1-(4-oxo-4-phenyl-1,4lambda5-azaphosphinan-1-yl)propan-1-one
Canonical SMILES
C#CCCC1(N=N1)CCC(=O)N2CCP(=O)(CC2)C3=CC=CC=C3
InChI
InChI=1S/C18H22N3O2P/c1-2-3-10-18(19-20-18)11-9-17(22)21-12-14-24(23,15-13-21)16-7-5-4-6-8-16/h1,4-8H,3,9-15H2
InChIKey
QRKVPFMJSNYQAH-UHFFFAOYSA-N

The Probe Interaction Atlas

Target(s) List of this Probe

3 Enzyme Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
dCTP pyrophosphatase 1 (DCTPP1) LDTP12013 14.62  LDD1965 
Isocitrate dehydrogenase [NADP], mitochondrial (IDH2) LDTP04211 7.73  LDD1965 
Lipid droplet-associated hydrolase (LDAH) LDTP16007 5.28  LDD1965 
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Full Information of The Labelling Profiles of This Probe

Quantification: AfBPP Probe vs Negative Probe
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
Probe:50uM; negative probe:50uM
Quantitative Method
TMT
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Peripheral blood
Disease Model
Normal
Model Name
Human normal cells (HEK-293T)
Note
Negative probe:C#CCCC1(CCC(NC)=O)N=N1
Interaction Atlas ID

References

1 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587