General Information of Target

Target ID LDTP13625
Target Name Ubl carboxyl-terminal hydrolase 18 (USP18)
Gene Name USP18
Gene ID 11274
Synonyms
ISG43; Ubl carboxyl-terminal hydrolase 18; EC 3.4.19.12; 43 kDa ISG15-specific protease; hUBP43; ISG15-specific-processing protease; Ubl thioesterase 18
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRNQSKASGSGLCEGDEVVSINGNP
CADLTYPEVIKLMESITDSLQMLIKRPSSGISEALISENENKNLEHLTHGGYVESTTLQI
RPATKTQCTEFFLAPVKTEVPLAENQRSGPDCAGSLKEETGPSYQRAPQMPDSQRGRVAE
ELILREKVEAVQPGPVVELQLSLSQERHKGASGPLVALPGAEKSKSPDPDPNLSHDRIVH
INSIPTNEKADPFLRSSKIIQISSGRELRVIQESEAGDAGLPRVEVILDCSDRQKTEGCR
LQAGKECVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPRSEKDHSRPHKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELERE
ADEEEEGDKEDTCEVAFLGASESEVDEELLSDVDDNTQVVNFDWDSGLVDIEKKLNRGDK
MEMLPDTTGKGALMFAKRRERMDQITAQKEEDKVGGTPSREQDAAQTDGLRTTTSYQRKE
EESVRTQSSVSKSYIEVSHGLGHVPQQNGFSGTSETANIQRMVPMNRTAKPFPGSVNQPA
TPFSPTRNMTSPIADFPAPPPYSAVTPPPDAFSRGVSSPIAGPAQPPPWPQPAPWSQPAF
YDSSERIASRDERISVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGK
RGTGAGGDSGPEEDYLSLGAEACNFMQSSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVW
SPGVAPTQPPAFPTSNPSKGTVVSSIKIAQPSYPPARPASTLNVAGPFKGPQAAVASQNY
TPKPTVSTPTVNAVQPGAVGPSNELPGMSGRGAQLFAKRQSRMEKYVVDSDTVQAHAARA
QSPTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPLAALKSQPSAAQPSKMGKKKGKKPLN
ALDVMKHQPYQLNASLFTFQPPDAKDGLPQKSSVKVNSALAMKQALPPRPVNAASPTNVQ
ASSVYSVPAYTSPPSFFAEASSPVSASPVPVGIPTSPKQESASSSYFVAPRPKFSAKKSG
VTIQVWKPSVVEE
Target Bioclass
Enzyme
Family
Peptidase C19 family
Subcellular location
Cytoplasm; Nucleus
Function
Interferon-induced ISG15-specific protease that plays a crucial role for maintaining a proper balance of ISG15-conjugated proteins in cells. Regulates protein ISGylation by efficiently cleaving ISG15 conjugates linked via isopeptide bonds. Regulates T-cell activation and T-helper 17 (Th17) cell differentiation by deubiquitinating TAK1, likely to keep TAK1-TAB complexes in steady conditions. In turn, restricts activation of NF-kappa-B, NFAT, and JNK as well as expression of IL2 in T-cells after TCR activation. Acts as a molecular adapter with USP20 to promote innate antiviral response through deubiquitinating STING1. Involved also in the negative regulation of the inflammatory response triggered by type I interferon. Upon recruitment by STAT2 to the type I interferon receptor subunit IFNAR2 interferes with the assembly of the ternary interferon-IFNAR1-IFNAR2 complex and acts as a negative regulator of the type I interferon signaling pathway.; [Isoform 2]: Has enzymatic activity similar to isoform 1 and interferes with type I interferon signaling. Major deISGylation enzyme for nuclear proteins.
Uniprot ID
Q9UMW8
Ensemble ID
ENST00000215794.8
HGNC ID
HGNC:12616
ChEMBL ID
CHEMBL3407317

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
NCIH1155 SNV: p.K29R .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 4 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
DBIA
 Probe Info 
C126(2.94)  LDD3323  [1]
IA-alkyne
 Probe Info 
N.A.  LDD0036  [2]
Compound 10
 Probe Info 
N.A.  LDD2216  [3]
TER-AC
 Probe Info 
N.A.  LDD0426  [4]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0270  AC15 HEK-293T C228(1.01)  LDD1513  [5]
 LDCM0281  AC21 HEK-293T C215(0.99)  LDD1520  [5]
 LDCM0283  AC23 HEK-293T C228(1.01)  LDD1522  [5]
 LDCM0289  AC29 HEK-293T C215(1.01)  LDD1528  [5]
 LDCM0292  AC31 HEK-293T C228(0.96)  LDD1531  [5]
 LDCM0298  AC37 HEK-293T C215(1.07)  LDD1537  [5]
 LDCM0300  AC39 HEK-293T C228(0.96)  LDD1539  [5]
 LDCM0307  AC45 HEK-293T C215(1.00)  LDD1546  [5]
 LDCM0309  AC47 HEK-293T C228(1.06)  LDD1548  [5]
 LDCM0312  AC5 HEK-293T C215(1.05)  LDD1551  [5]
 LDCM0316  AC53 HEK-293T C215(1.08)  LDD1555  [5]
 LDCM0318  AC55 HEK-293T C228(0.97)  LDD1557  [5]
 LDCM0325  AC61 HEK-293T C215(1.07)  LDD1564  [5]
 LDCM0327  AC63 HEK-293T C228(1.00)  LDD1566  [5]
 LDCM0334  AC7 HEK-293T C228(1.02)  LDD1568  [5]
 LDCM0248  AKOS034007472 HEK-293T C215(1.08)  LDD1511  [5]
 LDCM0379  CL11 HEK-293T C228(1.10)  LDD1583  [5]
 LDCM0409  CL21 HEK-293T C215(1.03)  LDD1613  [5]
 LDCM0411  CL23 HEK-293T C228(1.02)  LDD1615  [5]
 LDCM0422  CL33 HEK-293T C215(0.85)  LDD1626  [5]
 LDCM0424  CL35 HEK-293T C228(1.01)  LDD1628  [5]
 LDCM0435  CL45 HEK-293T C215(1.02)  LDD1639  [5]
 LDCM0437  CL47 HEK-293T C228(1.19)  LDD1641  [5]
 LDCM0448  CL57 HEK-293T C215(1.20)  LDD1651  [5]
 LDCM0450  CL59 HEK-293T C228(1.31)  LDD1653  [5]
 LDCM0461  CL69 HEK-293T C215(1.05)  LDD1664  [5]
 LDCM0464  CL71 HEK-293T C228(1.10)  LDD1667  [5]
 LDCM0475  CL81 HEK-293T C215(1.06)  LDD1678  [5]
 LDCM0477  CL83 HEK-293T C228(1.23)  LDD1680  [5]
 LDCM0484  CL9 HEK-293T C215(1.07)  LDD1687  [5]
 LDCM0488  CL93 HEK-293T C215(0.94)  LDD1691  [5]
 LDCM0490  CL95 HEK-293T C228(0.93)  LDD1693  [5]
 LDCM0022  KB02 DM93 C126(1.34)  LDD2472  [1]
 LDCM0023  KB03 ICC12 C130(1.91)  LDD2800  [1]
 LDCM0024  KB05 SKMEL24 C126(2.94)  LDD3323  [1]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
. Peptidase C19 family Q3LFD5
Transporter and channel
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Huntingtin (HTT) Huntingtin family P42858
Cytokine and receptor
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Interferon alpha/beta receptor 2 (IFNAR2) Type II cytokine receptor family P48551
Other
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Ubiquitin-like protein ISG15 (ISG15) . P05161

References

1 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
2 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
3 Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling. Anal Chem. 2021 Feb 2;93(4):2610-2618. doi: 10.1021/acs.analchem.0c04726. Epub 2021 Jan 20.
Mass spectrometry data entry: PXD022279
4 Differently Tagged Probes for Protein Profiling of Mitochondria. Chembiochem. 2019 May 2;20(9):1155-1160. doi: 10.1002/cbic.201800735. Epub 2019 Mar 26.
5 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402