General Information of Target

Target ID LDTP11186
Target Name NEDD4 family-interacting protein 1 (NDFIP1)
Gene Name NDFIP1
Gene ID 80762
Synonyms
N4WBP5; NEDD4 family-interacting protein 1; Breast cancer-associated protein SGA-1M; NEDD4 WW domain-binding protein 5; Putative MAPK-activating protein PM13; Putative NF-kappa-B-activating protein 164; Putative NFKB and MAPK-activating protein
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MKGLRSLAATTLALFLVFVFLGNSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRR
KDLSDRPLPERRSPNPQLLTIPEAATILLASLQKSPEDEEKNFDQTRFLEDSLLNW
Target Bioclass
Other
Subcellular location
Endosome membrane
Function
Activates HECT domain-containing E3 ubiquitin-protein ligases, including NEDD4 and ITCH, and consequently modulates the stability of their targets. As a result, controls many cellular processes. Prevents chronic T-helper cell-mediated inflammation by activating ITCH and thus controlling JUNB degradation. Promotes pancreatic beta cell death through degradation of JUNB and inhibition of the unfolded protein response, leading to reduction of insulin secretion. Restricts the production of pro-inflammatory cytokines in effector Th17 T-cells by promoting ITCH-mediated ubiquitination and degradation of RORC. Together with NDFIP2, limits the cytokine signaling and expansion of effector Th2 T-cells by promoting degradation of JAK1, probably by ITCH- and NEDD4L-mediated ubiquitination. Regulates peripheral T-cell tolerance to self and foreign antigens, forcing the exit of naive CD4+ T-cells from the cell cycle before they become effector T-cells. Negatively regulates RLR-mediated antiviral response by promoting SMURF1-mediated ubiquitination and subsequent degradation of MAVS. Negatively regulates KCNH2 potassium channel activity by decreasing its cell-surface expression and interfering with channel maturation through recruitment of NEDD4L to the Golgi apparatus where it mediates KCNH2 degradation. In cortical neurons, mediates the ubiquitination of the divalent metal transporter SLC11A2/DMT1 by NEDD4L, leading to its down-regulation and protection of the cells from cobalt and iron toxicity. Important for normal development of dendrites and dendritic spines in cortex. Enhances the ubiquitination of BRAT1 mediated by: NEDD4, NEDD4L and ITCH and is required for the nuclear localization of ubiquitinated BRAT1. Enhances the ITCH-mediated ubiquitination of MAP3K7 by recruiting E2 ubiquitin-conjugating enzyme UBE2L3 to ITCH. Modulates EGFR signaling through multiple pathways. In particular, may regulate the ratio of AKT1-to-MAPK8 signaling in response to EGF, acting on AKT1 probably through PTEN destabilization and on MAPK8 through ITCH-dependent MAP2K4 inactivation. As a result, may control cell growth rate. Inhibits cell proliferation by promoting PTEN nuclear localization and changing its signaling specificity.
Uniprot ID
Q9BT67
Ensemble ID
ENST00000253814.6
HGNC ID
HGNC:17592

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
JURKAT SNV: p.Y169H .
MEWO SNV: p.L185F .
MFE319 SNV: p.M124V; p.N129S .
SW620 SNV: p.P171L .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 6 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
STPyne
 Probe Info 
K204(2.07)  LDD0277  [1]
BTD
 Probe Info 
C15(0.78)  LDD1700  [2]
IA-alkyne
 Probe Info 
N.A.  LDD0165  [3]
IPM
 Probe Info 
N.A.  LDD0147  [4]
PF-06672131
 Probe Info 
N.A.  LDD0017  [5]
NAIA_5
 Probe Info 
N.A.  LDD2223  [6]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0213  Electrophilic fragment 2 MDA-MB-231 C15(2.40)  LDD1702  [2]
 LDCM0023  KB03 MDA-MB-231 C15(2.81)  LDD1701  [2]
 LDCM0507  Nucleophilic fragment 16b MDA-MB-231 C15(1.00)  LDD2100  [2]
 LDCM0513  Nucleophilic fragment 19b MDA-MB-231 C15(0.99)  LDD2106  [2]
 LDCM0514  Nucleophilic fragment 20a MDA-MB-231 C15(1.18)  LDD2107  [2]
 LDCM0518  Nucleophilic fragment 22a MDA-MB-231 C15(0.88)  LDD2111  [2]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C15(0.69)  LDD2125  [2]
 LDCM0534  Nucleophilic fragment 30a MDA-MB-231 C15(0.81)  LDD2127  [2]
 LDCM0211  Nucleophilic fragment 3b MDA-MB-231 C15(0.78)  LDD1700  [2]
 LDCM0546  Nucleophilic fragment 40 MDA-MB-231 C15(0.87)  LDD2140  [2]
 LDCM0547  Nucleophilic fragment 41 MDA-MB-231 C15(0.76)  LDD2141  [2]
 LDCM0552  Nucleophilic fragment 6a MDA-MB-231 C15(0.71)  LDD2146  [2]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Cytochrome b-c1 complex subunit 6, mitochondrial (UQCRH) UQCRH/QCR6 family P07919
Transporter and channel
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Natural resistance-associated macrophage protein 2 (SLC11A2) NRAMP family P49281

References

1 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
2 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
3 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
4 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
5 Site-Specific Activity-Based Protein Profiling Using Phosphonate Handles. Mol Cell Proteomics. 2023 Jan;22(1):100455. doi: 10.1016/j.mcpro.2022.100455. Epub 2022 Nov 24.
Mass spectrometry data entry: PXD036569
6 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264