General Information of Target

Target ID LDTP09879
Target Name Histone-lysine N-methyltransferase EZH1 (EZH1)
Gene Name EZH1
Gene ID 2145
Synonyms
KIAA0388; Histone-lysine N-methyltransferase EZH1; EC 2.1.1.356; ENX-2; Enhancer of zeste homolog 1
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDTRKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKTESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFNSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGSLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVVRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEAPAGPLEEDDLEPLTLAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSPSPSPSARPGPPPSEEAMDFREEGPECET
PGIFISMDDDSGLTEAALLDSSLEGPLPKETAAGGLTLKEERSPQTLAPVGEDAMKTPSP
AAEDAREPEAKGNS
Target Type
Clinical trial
Target Bioclass
Enzyme
Family
Class V-like SAM-binding methyltransferase superfamily, Histone-lysine methyltransferase family, EZ subfamily
Subcellular location
Nucleus
Function
Polycomb group (PcG) protein. Catalytic subunit of the PRC2/EED-EZH1 complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene. Able to mono-, di- and trimethylate 'Lys-27' of histone H3 to form H3K27me1, H3K27me2 and H3K27me3, respectively. Required for embryonic stem cell derivation and self-renewal, suggesting that it is involved in safeguarding embryonic stem cell identity. Compared to EZH2-containing complexes, it is less abundant in embryonic stem cells, has weak methyltransferase activity and plays a less critical role in forming H3K27me3, which is required for embryonic stem cell identity and proper differentiation.
TTD ID
T17986
Uniprot ID
Q92800
DrugMap ID
TTNJA0C
Ensemble ID
ENST00000428826.7
HGNC ID
HGNC:3526
ChEMBL ID
CHEMBL2189116

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
G415 SNV: p.A427S DBIA    Probe Info 
HCT15 SNV: p.E191D .
HEC1 SNV: p.R321C .
HEC1B SNV: p.R321C .
IM95 SNV: p.R443Ter .
JURKAT SNV: p.R557H .
KURAMOCHI SNV: p.R557C .
MCC13 SNV: p.R360C;p.S632F;p.Q718Ter
Substitution: p.S358I
.
MEWO SNV: p.P133L DBIA    Probe Info 
MFE319 SNV: p.Q467R .
MOLT4 SNV: p.G200E .
NCIH1155 SNV: p.R287W DBIA    Probe Info 
REH SNV: p.C537Y .
SKMEL30 Substitution: p.R708Q .
SKMEL5 SNV: p.P4L DBIA    Probe Info 
SUDHL4 SNV: p.I3V .
SUPT1 SNV: p.E163Ter .
TC71 SNV: p.R443Ter .
UACC62 SNV: p.G222S DBIA    Probe Info 

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 5 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
DBIA
 Probe Info 
C17(2.90)  LDD3312  [1]
BTD
 Probe Info 
C696(1.30)  LDD2107  [2]
AHL-Pu-1
 Probe Info 
C504(2.18)  LDD0171  [3]
IA-alkyne
 Probe Info 
C11(5.99)  LDD1703  [4]
NAIA_4
 Probe Info 
N.A.  LDD2226  [5]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0026  4SU-RNA+native RNA DM93 C504(2.18)  LDD0171  [3]
 LDCM0022  KB02 T cell C11(5.99)  LDD1703  [4]
 LDCM0023  KB03 A101D C17(5.45)  LDD2667  [1]
 LDCM0024  KB05 HMCB C17(2.90)  LDD3312  [1]
 LDCM0514  Nucleophilic fragment 20a MDA-MB-231 C696(1.30)  LDD2107  [2]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C605(1.14)  LDD2125  [2]
 LDCM0543  Nucleophilic fragment 38 MDA-MB-231 C605(1.26)  LDD2136  [2]
 LDCM0546  Nucleophilic fragment 40 MDA-MB-231 C605(0.80)  LDD2140  [2]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Other
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Polycomb protein EED (EED) WD repeat ESC family O75530

The Drug(s) Related To This Target

Approved
Click To Hide/Show 1 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
Tazemetostat Small molecular drug DB12887
Phase 2
Click To Hide/Show 1 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
Ds-3201b Small molecular drug DNM79H
Phase 1
Click To Hide/Show 2 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
Hh2853 Small molecular drug D6EU7R
Ds-3201 . D0LG8T
Investigative
Click To Hide/Show 1 Drug(s) Interacting with This Target
Drug Name Drug Type External ID
Gsk343 Small molecular drug D02TVQ

References

1 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
2 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
3 Chemoproteomic capture of RNA binding activity in living cells. Nat Commun. 2023 Oct 7;14(1):6282. doi: 10.1038/s41467-023-41844-z.
Mass spectrometry data entry: PXD044625
4 An Activity-Guided Map of Electrophile-Cysteine Interactions in Primary Human T Cells. Cell. 2020 Aug 20;182(4):1009-1026.e29. doi: 10.1016/j.cell.2020.07.001. Epub 2020 Jul 29.
5 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264