General Information of Probe

Probe ID
LDPC0547
Probe Name
C321
Probe Type
PAL-AfBPP Probe
Structure
3D MOL 2D MOL
Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 358.32
Lipid-water partition coefficient (xlogp) 2.20482
Rotatable Bond Count (rotbonds) 10
Hydrogen Bond Donor Count (hbonddonor) 2
Hydrogen Bond Acceptor Count (hbondacc) 6
Chemical Identifiers
Formula
C15H17F3N4O3
Canonical SMILES
[H]C#CC([H])([H])C([H])([H])C1(C([H])([H])C([H])([H])C(=O)N([H])C([H])([H])C(O[H])(c2nc([H])c(C([H])([H])[H])o2)C(F)(F)F)N=N1
InChI
InChI=1S/C15H17F3N4O3/c1-3-4-6-13(21-22-13)7-5-11(23)20-9-14(24,15(16,17)18)12-19-8-10(2)25-12/h1,8,24H,4-7,9H2,2H3,(H,20,23)/t14-/m0/s1
InChIKey
PAGVNKYBZAQWAL-AWEZNQCLSA-N

The Probe Interaction Atlas

Target(s) List of this Probe

1 Transporter and channel Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Metaxin-1 (MTX1) LDTP05900 6.82  LDD1987 
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Full Information of The Labelling Profiles of This Probe

Quantification: AfBPP Probe vs Negative Probe
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
Probe:50uM; negative probe:50uM
Quantitative Method
TMT
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Peripheral blood
Disease Model
Normal
Model Name
Human normal cells (HEK-293T)
Note
Negative probe:C#CCCC1(CCC(NC)=O)N=N1
Interaction Atlas ID

References

1 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587