General Information of Probe

Probe ID
LDPC0408
Probe Name
C168
Probe Type
PAL-AfBPP Probe
Structure
2D MOL
Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 317.349
Lipid-water partition coefficient (xlogp) 1.0278
Rotatable Bond Count (rotbonds) 8
Hydrogen Bond Donor Count (hbonddonor) 2
Hydrogen Bond Acceptor Count (hbondacc) 6
Chemical Identifiers
Formula
C15H19N5O3
Canonical SMILES
[H]C#CC([H])([H])C([H])([H])C1(C([H])([H])C([H])([H])C(=O)N([H])C2([H])C([H])([H])OC([H])([H])C2([H])Oc2c([H])nn([H])c2[H])N=N1
InChI
InChI=1S/C15H19N5O3/c1-2-3-5-15(19-20-15)6-4-14(21)18-12-9-22-10-13(12)23-11-7-16-17-8-11/h1,7-8,12-13H,3-6,9-10H2,(H,16,17)(H,18,21)/t12-,13+/m1/s1
InChIKey
LKKKCXBSUCPDER-OLZOCXBDSA-N

The Probe Interaction Atlas

Target(s) List of this Probe

1 Enzyme Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Dihydrofolate reductase (DHFR) LDTP01769 9.19  LDD1848 
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Full Information of The Labelling Profiles of This Probe

Quantification: AfBPP Probe vs Negative Probe
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
Probe:50uM; negative probe:50uM
Quantitative Method
TMT
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Peripheral blood
Disease Model
Normal
Model Name
Human normal cells (HEK-293T)
Note
Negative probe:C#CCCC1(CCC(NC)=O)N=N1
Interaction Atlas ID

References

1 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587