General Information of Probe

Probe ID
LDPC0351
Probe Name
C103
Probe Type
PAL-AfBPP Probe
Structure
3D MOL 2D MOL
Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 330.432
Lipid-water partition coefficient (xlogp) 2.0091
Rotatable Bond Count (rotbonds) 8
Hydrogen Bond Donor Count (hbonddonor) 2
Hydrogen Bond Acceptor Count (hbondacc) 4
Chemical Identifiers
Formula
C18H26N4O2
Canonical SMILES
[H]C#CC([H])([H])C([H])([H])C1(C([H])([H])C([H])([H])N([H])C(=O)C2([H])C([H])([H])C([H])([H])C3([H])N([H])C(=O)C(C([H])([H])[H])(C([H])([H])[H])C3([H])C2([H])[H])N=N1
InChI
InChI=1S/C18H26N4O2/c1-4-5-8-18(21-22-18)9-10-19-15(23)12-6-7-14-13(11-12)17(2,3)16(24)20-14/h1,12-14H,5-11H2,2-3H3,(H,19,23)(H,20,24)/t12-,13-,14+/m1/s1
InChIKey
GVRXRFOPQIHXKQ-MCIONIFRSA-N

The Probe Interaction Atlas

Target(s) List of this Probe

1 Other Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Neuferricin (CYB5D2) LDTP15623 7.11  LDD1791 
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Full Information of The Labelling Profiles of This Probe

Quantification: AfBPP Probe vs Negative Probe
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
Probe:50uM; negative probe:50uM
Quantitative Method
TMT
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Peripheral blood
Disease Model
Normal
Model Name
Human normal cells (HEK-293T)
Note
Negative probe:C#CCCC1(CCC(NC)=O)N=N1
Interaction Atlas ID

References

1 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587