General Information of Probe

Probe ID
LDPC0284
Probe Name
C015
Probe Type
PAL-AfBPP Probe
Structure
2D MOL
Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 288.395
Lipid-water partition coefficient (xlogp) 1.941
Rotatable Bond Count (rotbonds) 6
Hydrogen Bond Donor Count (hbonddonor) 1
Hydrogen Bond Acceptor Count (hbondacc) 4
Chemical Identifiers
Formula
C16H24N4O
Canonical SMILES
C#CCCC1(CCC(=O)NC2CC3CCC2N(C)C3)N=N1
InChI
InChI=1S/C16H24N4O/c1-3-4-8-16(18-19-16)9-7-15(21)17-13-10-12-5-6-14(13)20(2)11-12/h1,12-14H,4-11H2,2H3,(H,17,21)
InChIKey
RNASXFYJEKSQDN-UHFFFAOYSA-N

The Probe Interaction Atlas

Target(s) List of this Probe

2 Enzyme Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
Probable serine carboxypeptidase CPVL (CPVL) LDTP15988 5.24  LDD1724 
Retinoid-inducible serine carboxypeptidase (SCPEP1) LDTP16032 5.46  LDD1724 
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Full Information of The Labelling Profiles of This Probe

Quantification: AfBPP Probe vs Negative Probe
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
Probe:50uM; negative probe:50uM
Quantitative Method
TMT
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Peripheral blood
Disease Model
Normal
Model Name
Human normal cells (HEK-293T)
Note
Negative probe:C#CCCC1(CCC(NC)=O)N=N1
Interaction Atlas ID

References

1 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587