General Information of Target

Target ID LDTP14756
Target Name Endogenous retrovirus group FC1 member 1 Env polyprotein (ERVFC1-1)
Gene Name ERVFC1-1
Synonyms
Endogenous retrovirus group FC1 member 1 Env polyprotein; Envelope polyprotein; Fc2deltaenv; HERV-F(c)2_7q36.2 provirus ancestral Env polyprotein) [Includes: Surface protein; SU; Truncated transmembrane protein; TM)]
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MDPLHTIEKVPARRNIHDRGHQGHRMGDGTPGRPKISVQQMTRFSLIIFFLSAPFVVNAS
TSNVFLQWAHSYADGLQQGDPCWVCGSLPVTNTMELPWWVSPLQGKDWVFFQSFIGDLKQ
WTGAQMTGVTRKNISEWPINKTLNEPGHDKPFSVNETRDKVIAFAIPLLDTKVFVQTSRP
QNTQYRNGFLQIWDGFIWLTATKGHLSQIAPLCWEQRNHSLDNWPNTTRVMGWIPPGQCR
HTILLQQRDLFATDWSQQPGLNWYAPNGTQWLCSPNLWPWLPSGWLGCCTLGIPWAQGRW
VKTMEVYPYLPHVVNQGTRAIVHRNDHLPTIFMPSVGLGTVIQHIEALANFTQRALNDSL
QSISLMNAEVYYMHEDILQNRMALDILTAAEGGTCALIKTECCVYIPNNSRNISLALEDT
CRQIQVISSSALSLHDWIASQFSGRPSWWQKILIVLATLWSVGIALCCGLYFCRMFSQHI
PQTHSIIFQQELPLSPPSQEHYQSQRDIFHSNAP
Target Bioclass
Other
Family
Gamma type-C retroviral envelope protein family, HERV class-I F(c)2 env subfamily
Subcellular location
Virion
Function
Retroviral envelope proteins mediate receptor recognition and membrane fusion during early infection. Endogenous envelope proteins may have kept, lost or modified their original function during evolution. This endogenous envelope protein has lost its original fusogenic properties.
Uniprot ID
P60608
HGNC ID
HGNC:38137

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 1 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
DBIA
 Probe Info 
C132(0.91)  LDD1492  [1]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0022  KB02 HEK-293T C132(0.91)  LDD1492  [1]
 LDCM0023  KB03 HEK-293T C132(1.03)  LDD1497  [1]
 LDCM0024  KB05 HEK-293T C132(0.89)  LDD1502  [1]

References

1 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402