General Information of Target

Target ID LDTP12161
Target Name Netrin-4 (NTN4)
Gene Name NTN4
Gene ID 59277
Synonyms
Netrin-4; Beta-netrin; Hepar-derived netrin-like protein
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP
VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYEWQSRDTPIL
LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV
LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE
MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLPGG
TASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE
GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA
RKSRLKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM
KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKRKNSDECEVC
CQGGQLLCCGTCPRVFHEDCHIPPVEAKRMLWSCTFCRMKRSSGSQQCHHVSKTLERQMQ
PQDQLIRDYGEPFQEAMWLDLVKERLITEMYTVAWFVRDMRLMFRNHKTFYKASDFGQVG
LDLEAEFEKDLKDVLGFHEANDGGFWTLP
Target Bioclass
Other
Subcellular location
Secreted, extracellular space, extracellular matrix, basement membrane
Function May play an important role in neural, kidney and vascular development. Promotes neurite elongation from olfactory bulb explants.
Uniprot ID
Q9HB63
Ensemble ID
ENST00000343702.9
HGNC ID
HGNC:13658

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
DU145 SNV: p.P394L .
IM95 SNV: p.C508R .
LOXIMVI SNV: p.A388G .
MELJUSO SNV: p.Q148Ter .
MEWO SNV: p.S525L .
MFE319 SNV: p.W491Ter .
MKN45 SNV: p.M142V .
NCIH2172 SNV: p.G352W .
OCUG1 SNV: p.E59K DBIA    Probe Info 
SW620 SNV: p.P245T .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 1 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
DBIA
 Probe Info 
C362(1.05); C371(1.05); C329(1.00)  LDD0078  [1]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0281  AC21 HEK-293T C80(0.88)  LDD1520  [2]
 LDCM0289  AC29 HEK-293T C80(0.68)  LDD1528  [2]
 LDCM0298  AC37 HEK-293T C80(0.65)  LDD1537  [2]
 LDCM0307  AC45 HEK-293T C80(1.04)  LDD1546  [2]
 LDCM0312  AC5 HEK-293T C80(0.85)  LDD1551  [2]
 LDCM0316  AC53 HEK-293T C80(1.14)  LDD1555  [2]
 LDCM0325  AC61 HEK-293T C80(1.19)  LDD1564  [2]
 LDCM0248  AKOS034007472 HEK-293T C80(0.93)  LDD1511  [2]
 LDCM0020  ARS-1620 HCC44 C362(1.05); C371(1.05); C329(1.00)  LDD0078  [1]
 LDCM0409  CL21 HEK-293T C80(0.99)  LDD1613  [2]
 LDCM0422  CL33 HEK-293T C80(1.13)  LDD1626  [2]
 LDCM0435  CL45 HEK-293T C80(1.01)  LDD1639  [2]
 LDCM0448  CL57 HEK-293T C80(1.20)  LDD1651  [2]
 LDCM0461  CL69 HEK-293T C80(1.29)  LDD1664  [2]
 LDCM0475  CL81 HEK-293T C80(1.14)  LDD1678  [2]
 LDCM0484  CL9 HEK-293T C80(0.77)  LDD1687  [2]
 LDCM0488  CL93 HEK-293T C80(1.18)  LDD1691  [2]
 LDCM0022  KB02 8305C C329(1.04)  LDD2248  [3]
 LDCM0023  KB03 8505C C329(2.54)  LDD2666  [3]
 LDCM0024  KB05 COLO792 C329(1.09)  LDD3310  [3]

References

1 Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries. Nat Biotechnol. 2021 May;39(5):630-641. doi: 10.1038/s41587-020-00778-3. Epub 2021 Jan 4.
2 Accelerating multiplexed profiling of protein-ligand interactions: High-throughput plate-based reactive cysteine profiling with minimal input. Cell Chem Biol. 2024 Mar 21;31(3):565-576.e4. doi: 10.1016/j.chembiol.2023.11.015. Epub 2023 Dec 19.
Mass spectrometry data entry: PXD044402
3 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840