General Information of Target

Target ID LDTP11275
Target Name ER degradation-enhancing alpha-mannosidase-like protein 2 (EDEM2)
Gene Name EDEM2
Gene ID 55741
Synonyms
C20orf31; C20orf49; ER degradation-enhancing alpha-mannosidase-like protein 2
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MDVFQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQS
ATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNR
DEVSFIKKLRQK
Target Bioclass
Enzyme
Family
Glycosyl hydrolase 47 family
Subcellular location
Endoplasmic reticulum lumen
Function
Involved in the endoplasmic reticulum-associated degradation (ERAD) pathway that targets misfolded glycoproteins for degradation in an N-glycan-dependent manner. May initiate ERAD by promoting the first mannose trimming step of ERAD substrates, from Man9GlcNAc2 to Man8GlcNAc2. Seems to recognize and bind to exposed hydrophobic regions in target proteins.
Uniprot ID
Q9BV94
Ensemble ID
ENST00000374491.3
HGNC ID
HGNC:15877

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 2 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
DBIA
 Probe Info 
C558(2.60)  LDD3325  [1]
5E-2FA
 Probe Info 
N.A.  LDD2235  [2]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0022  KB02 A101D C558(2.72)  LDD2250  [1]
 LDCM0023  KB03 A101D C558(4.45)  LDD2667  [1]
 LDCM0024  KB05 UACC257 C558(2.60)  LDD3325  [1]

References

1 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
2 Global profiling of functional histidines in live cells using small-molecule photosensitizer and chemical probe relay labelling. Nat Chem. 2024 Jun 4. doi: 10.1038/s41557-024-01545-6. Online ahead of print.
Mass spectrometry data entry: PXD042377