General Information of Target

Target ID LDTP10710
Target Name Serine protease FAM111A (FAM111A)
Gene Name FAM111A
Gene ID 63901
Synonyms
KIAA1895; Serine protease FAM111A; EC 3.4.21.-
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MEMTEMTGVSLKRGALVVEDNDSGVPVEETKKQKLSECSLTKGQDGLQNDFLSISEDVPR
PPDTVSTGKGGKNSEAQLEDEEEEEEDGLSEECEEEESESFADMMKHGLTEADVGITKFV
SSHQGFSGILKERYSDFVVHEIGKDGRISHLNDLSIPVDEEDPSEDIFTVLTAEEKQRLE
ELQLFKNKETSVAIEVIEDTKEKRTIIHQAIKSLFPGLETKTEDREGKKYIVAYHAAGKK
ALANPRKHSWPKSRGSYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTKDKRAITV
QEIAVLKITAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNITGTDDQVQ
QAMNSLKEIGFINYYGMQRFGTTAVPTYQVGRAILQNSWTEVMDLILKPRSGAEKGYLVK
CREEWAKTKDPTAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQ
SYVWNNMVSKRIEDYGLKPVPGDLVLKGATATYIEEDDVNNYSIHDVVMPLPGFDVIYPK
HKIQEAYREMLTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFN
TDVDNLEGKTPPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWL
R
Target Bioclass
Enzyme
Family
FAM111 family
Subcellular location
Nucleus
Function
Single-stranded DNA-binding serine protease that mediates the proteolytic cleavage of covalent DNA-protein cross-links (DPCs) during DNA synthesis, thereby playing a key role in maintaining genomic integrity. DPCs are highly toxic DNA lesions that interfere with essential chromatin transactions, such as replication and transcription, and which are induced by reactive agents, such as UV light or formaldehyde. Protects replication fork from stalling by removing DPCs, such as covalently trapped topoisomerase 1 (TOP1) adducts on DNA lesion, or poly(ADP-ribose) polymerase 1 (PARP1)-DNA complexes trapped by PARP inhibitors. Required for PCNA loading on replication sites. Promotes S-phase entry and DNA synthesis. Acts also as a restriction factor for some viruses including SV40 polyomavirus and vaccinia virus. Mechanistically, affects nuclear barrier function during viral replication by mediating the disruption of the nuclear pore complex (NPC) via its protease activity. In turn, interacts with vaccinia virus DNA-binding protein OPG079 in the cytoplasm and promotes its degradation without the need of its protease activity but through autophagy.
Uniprot ID
Q96PZ2
Ensemble ID
ENST00000361723.7
HGNC ID
HGNC:24725

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 4 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
BTD
 Probe Info 
C290(0.97)  LDD1700  [1]
DBIA
 Probe Info 
C36(44.59); C290(5.16)  LDD0209  [2]
IA-alkyne
 Probe Info 
N.A.  LDD0166  [3]
Lodoacetamide azide
 Probe Info 
N.A.  LDD0037  [4]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0022  KB02 697 C36(1.76); C212(1.40)  LDD2245  [5]
 LDCM0023  KB03 Jurkat C36(44.59); C290(5.16)  LDD0209  [2]
 LDCM0024  KB05 COLO792 C212(2.57)  LDD3310  [5]
 LDCM0497  Nucleophilic fragment 11b MDA-MB-231 C290(0.98)  LDD2090  [1]
 LDCM0500  Nucleophilic fragment 13a MDA-MB-231 C290(1.14)  LDD2093  [1]
 LDCM0515  Nucleophilic fragment 20b MDA-MB-231 C290(0.72)  LDD2108  [1]
 LDCM0527  Nucleophilic fragment 26b MDA-MB-231 C290(0.98)  LDD2120  [1]
 LDCM0532  Nucleophilic fragment 29a MDA-MB-231 C290(0.74)  LDD2125  [1]
 LDCM0534  Nucleophilic fragment 30a MDA-MB-231 C290(0.90)  LDD2127  [1]
 LDCM0542  Nucleophilic fragment 37 MDA-MB-231 C290(1.09)  LDD2135  [1]
 LDCM0543  Nucleophilic fragment 38 MDA-MB-231 C290(0.91)  LDD2136  [1]
 LDCM0211  Nucleophilic fragment 3b MDA-MB-231 C290(0.97)  LDD1700  [1]
 LDCM0547  Nucleophilic fragment 41 MDA-MB-231 C290(0.64)  LDD2141  [1]
 LDCM0550  Nucleophilic fragment 5a MDA-MB-231 C290(2.49)  LDD2144  [1]

References

1 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
2 Covalent Inhibition by a Natural Product-Inspired Latent Electrophile. J Am Chem Soc. 2023 May 24;145(20):11097-11109. doi: 10.1021/jacs.3c00598. Epub 2023 May 15.
3 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
4 Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation. Anal Chem. 2022 Mar 8;94(9):3800-3810. doi: 10.1021/acs.analchem.1c04402. Epub 2022 Feb 23.
Mass spectrometry data entry: PXD028853
5 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840