General Information of Target

Target ID LDTP10475
Target Name Zinc finger protein 462 (ZNF462)
Gene Name ZNF462
Gene ID 58499
Synonyms
KIAA1803; Zinc finger protein 462; Zinc finger PBX1-interacting protein; ZFPIP
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MESVTFEDVAVEFIQEWALLDSARRSLCKYRMLDQCRTLASRGTPPCKPSCVSQLGQRAE
PKATERGILRATGVAWESQLKPEELPSMQDLLEEASSRDMQMGPGLFLRMQLVPSIEERE
TPLTREDRPALQEPPWSLGCTGLKAAMQIQRVVIPVPTLGHRNPWVARDSAVPARDPAWL
QEDKVEEEAMAPGLPTACSQEPVTFADVAVVFTPEEWVFLDSTQRSLYRDVMLENYRNLA
SVADQLCKPNALSYLEERGEQWTTDRGVLSDTCAEPQCQPQEAIPSQDTFTEILSIDVKG
EQPQPGEKLYKYNELEKPFNSIEPLFQYQRIHAGEASCECQEIRNSFFQSAHLIVPEKIR
SGDKSYACNKCEKSFRYSSDLIRHEKTHTAEKCFDCQECGQAFKYSSNLRRHMRTHTGEK
PFECSQCGKTFTRNFNLILHQRNHTGEKPYECKDCGKAFNQPSSLRSHVRTHTGEKPFEC
SQCGKAFREHSSLKTHLRTHTREKPYECNQCGKPFRTSTHLNVHKRIHTGEKLYECATCG
QVLSRLSTLKSHMRTHTGEKPYVCQECGRAFSEPSSLRKHARTHSGKKPYACQECGRAFG
QSSHLIVHVRTHSAGRPYQCNQCEKAFRHSSSLTVHKRTHVGRETIRNGSLPLSMSHPYC
GPLAN
Target Bioclass
Transcription factor
Subcellular location
Nucleus
Function
Zinc finger nuclear factor involved in transcription by regulating chromatin structure and organization. Involved in the pluripotency and differentiation of embryonic stem cells by regulating SOX2, POU5F1/OCT4, and NANOG. By binding PBX1, prevents the heterodimerization of PBX1 and HOXA9 and their binding to DNA. Regulates neuronal development and neural cell differentiation.
Uniprot ID
Q96JM2
Ensemble ID
ENST00000277225.10
HGNC ID
HGNC:21684

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
8505C SNV: p.D1238Y DBIA    Probe Info 
A2058 Deletion: p.H572_P576del DBIA    Probe Info 
A549 SNV: p.Q759H DBIA    Probe Info 
AN3CA Deletion: p.Q109NfsTer16
SNV: p.E2249D
DBIA    Probe Info 
BICR22 SNV: p.D1447H DBIA    Probe Info 
CAL51 SNV: p.N2500D .
COLO678 SNV: p.R452H DBIA    Probe Info 
COLO792 SNV: p.P536L DBIA    Probe Info 
EFO27 SNV: p.T2183S .
GB1 SNV: p.N358D DBIA    Probe Info 
HCT116 SNV: p.S1630F; p.P1707R .
HCT15 SNV: p.R1734M; p.A2017V; p.R2114M .
IGR37 SNV: p.P1244S DBIA    Probe Info 
IGR39 SNV: p.P1244S DBIA    Probe Info 
IGROV1 SNV: p.P1001S DBIA    Probe Info 
Ishikawa (Heraklio) 02 ER SNV: p.M449V; p.K1693E DBIA    Probe Info 
JURKAT SNV: p.Q1476Ter .
KMS11 SNV: p.R1372G .
KYSE30 SNV: p.D2382N DBIA    Probe Info 
LNCaP clone FGC SNV: p.E979A DBIA    Probe Info 
NALM6 SNV: p.A1346T .
NCIH1155 SNV: p.R856W .
NCIH2172 SNV: p.Q558L; p.G1311R .
OVK18 SNV: p.A1500T DBIA    Probe Info 
PC3 SNV: p.P103L .
PC9 SNV: p.E1636K .
REH SNV: p.R2280H .
RKO SNV: p.T1525A DBIA    Probe Info 
SNGM SNV: p.V1991A DBIA    Probe Info 
SNU5 SNV: p.Q2185K .
SUPT1 SNV: p.R255Ter; p.V1999M DBIA    Probe Info 
SW1783 SNV: p.S1432R DBIA    Probe Info 
SW620 SNV: p.S2129F DBIA    Probe Info 
SW756 SNV: p.S2096T .
TE11 SNV: p.E246K DBIA    Probe Info 
ZR751 SNV: p.D686Y DBIA    Probe Info 

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 5 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
ONAyne
 Probe Info 
K179(2.48)  LDD0274  [1]
DBIA
 Probe Info 
C930(1.65); C574(2.53)  LDD3310  [2]
IPM
 Probe Info 
C2287(2.00)  LDD1701  [3]
IA-alkyne
 Probe Info 
C1984(0.00); C1729(0.00)  LDD0165  [4]
NAIA_4
 Probe Info 
N.A.  LDD2226  [5]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0022  KB02 786-O C829(2.77)  LDD2247  [2]
 LDCM0023  KB03 MDA-MB-231 C2287(2.00)  LDD1701  [3]
 LDCM0024  KB05 COLO792 C930(1.65); C574(2.53)  LDD3310  [2]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Enzyme
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Histone-lysine N-methyltransferase EHMT2 (EHMT2) Histone-lysine methyltransferase family Q96KQ7

References

1 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
2 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
3 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761
4 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
5 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264