General Information of Target

Target ID LDTP08474
Target Name 5-phosphohydroxy-L-lysine phospho-lyase (PHYKPL)
Gene Name PHYKPL
Gene ID 85007
Synonyms
AGXT2L2; 5-phosphohydroxy-L-lysine phospho-lyase; EC 4.2.3.134; Alanine--glyoxylate aminotransferase 2-like 2
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MAADQRPKADTLALRQRLISSSCRLFFPEDPVKIVRAQGQYMYDEQGAEYIDCISNVAHV
GHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLA
LRLARHYTGHQDVVVLDHAYHGHLSSLIDISPYKFRNLDGQKEWVHVAPLPDTYRGPYRE
DHPNPAMAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAG
GVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFE
ATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDV
RGVGLFIGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLD
NARQVVAKLDAILTDMEEKVRSCETLRLQP
Target Bioclass
Enzyme
Family
Class-III pyridoxal-phosphate-dependent aminotransferase family
Subcellular location
Mitochondrion
Function Catalyzes the pyridoxal-phosphate-dependent breakdown of 5-phosphohydroxy-L-lysine, converting it to ammonia, inorganic phosphate and 2-aminoadipate semialdehyde.
Uniprot ID
Q8IUZ5
Ensemble ID
ENST00000308158.10
HGNC ID
HGNC:28249

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
IGR1 SNV: p.A301S .
NCIH1155 SNV: p.G340C .
NCIN87 SNV: p.T302I .
REH SNV: p.A186V .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 3 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
Probe 1
 Probe Info 
Y387(19.95); Y396(23.69)  LDD3495  [1]
DBIA
 Probe Info 
C443(0.85)  LDD3336  [2]
NAIA_5
 Probe Info 
C416(0.00); C288(0.00)  LDD2223  [3]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0022  KB02 CAL-62 C443(1.06)  LDD2289  [2]
 LDCM0023  KB03 CAL-62 C443(0.90)  LDD2706  [2]
 LDCM0024  KB05 MONO-MAC-6 C443(0.85)  LDD3336  [2]

References

1 An Azo Coupling-Based Chemoproteomic Approach to Systematically Profile the Tyrosine Reactivity in the Human Proteome. Anal Chem. 2021 Jul 27;93(29):10334-10342. doi: 10.1021/acs.analchem.1c01935. Epub 2021 Jul 12.
2 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
3 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264