General Information of Target

Target ID LDTP08282
Target Name Serine incorporator 5 (SERINC5)
Gene Name SERINC5
Gene ID 256987
Synonyms
C5orf12; Serine incorporator 5
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MSAQCCAGQLACCCGSAGCSLCCDCCPRIRQSLSTRFMYALYFILVVVLCCIMMSTTVAH
KMKEHIPFFEDMCKGIKAGDTCEKLVGYSAVYRVCFGMACFFFIFCLLTLKINNSKSCRA
HIHNGFWFFKLLLLGAMCSGAFFIPDQDTFLNAWRYVGAVGGFLFIGIQLLLLVEFAHKW
NKNWTAGTASNKLWYASLALVTLIMYSIATGGLVLMAVFYTQKDSCMENKILLGVNGGLC
LLISLVAISPWVQNRQPHSGLLQSGVISCYVTYLTFSALSSKPAEVVLDEHGKNVTICVP
DFGQDLYRDENLVTILGTSLLIGCILYSCLTSTTRSSSDALQGRYAAPELEIARCCFCFS
PGGEDTEEQQPGKEGPRVIYDEKKGTVYIYSYFHFVFFLASLYVMMTVTNWFNHVRSAFH
LLP
Target Bioclass
Transporter and channel
Family
TDE1 family
Subcellular location
Cytoplasm, perinuclear region; Cell membrane
Function
Restriction factor required to restrict infectivity of lentiviruses, such as HIV-1: acts by inhibiting an early step of viral infection. Impairs the penetration of the viral particle into the cytoplasm. Enhances the incorporation of serine into phosphatidylserine and sphingolipids. May play a role in providing serine molecules for the formation of myelin glycosphingolipids in oligodendrocytes.
Uniprot ID
Q86VE9
Ensemble ID
ENST00000507668.7
HGNC ID
HGNC:18825

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 1 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
IA-alkyne
 Probe Info 
0.54  LDD2183  [1]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0625  F8 Ramos C82(1.49)  LDD2187  [1]
 LDCM0572  Fragment10 Ramos C82(3.86)  LDD2189  [1]
 LDCM0573  Fragment11 Ramos C82(1.48); 1.07  LDD2190  [1]
 LDCM0580  Fragment21 Ramos 0.71  LDD2195  [1]
 LDCM0578  Fragment27 Ramos 0.71  LDD2197  [1]
 LDCM0586  Fragment28 Ramos 1.55  LDD2198  [1]
 LDCM0588  Fragment30 Ramos C82(2.23); 0.37  LDD2199  [1]
 LDCM0468  Fragment33 Ramos 0.78  LDD2202  [1]
 LDCM0566  Fragment4 Ramos C82(2.19)  LDD2184  [1]
 LDCM0614  Fragment56 Ramos C82(4.25)  LDD2205  [1]
 LDCM0569  Fragment7 Ramos C82(1.15); 1.35  LDD2186  [1]
 LDCM0023  KB03 Ramos 0.54  LDD2183  [1]

References

1 Site-specific quantitative cysteine profiling with data-independent acquisition-based mass spectrometry. Methods Enzymol. 2023;679:295-322. doi: 10.1016/bs.mie.2022.07.037. Epub 2022 Sep 7.
Mass spectrometry data entry: PXD027578