General Information of Target

Target ID LDTP07146
Target Name Synaptotagmin-6 (SYT6)
Gene Name SYT6
Gene ID 148281
Synonyms
Synaptotagmin-6; Synaptotagmin VI; SytVI
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MSGVWGAGGPRCQEALAVLASLCRARPPPLGLDVETCRSFELQPPERSPSAAGAGTSVSL
LAVVVIVCGVALVAVFLFLFWKLCWMPWRNKEASSPSSANPPLEALQSPSFRGNMADKLK
DPSTLGFLEAAVKISHTSPDIPAEVQMSVKEHIMRHTRLQRQTTEPASSTRHTSFKRHLP
RQMHVSSVDYGNELPPAAEQPTSIGRIKPELYKQKSVDGEDAKSEATKSCGKINFSLRYD
YETETLIVRILKAFDLPAKDFCGSSDPYVKIYLLPDRKCKLQTRVHRKTLNPTFDENFHF
PVPYEELADRKLHLSVFDFDRFSRHDMIGEVILDNLFEASDLSRETSIWKDIQYATSESV
DLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLLCDGRRLKKKKTTIK
KNTLNPVYNEAIIFDIPPENMDQVSLLISVMDYDRVGHNEIIGVCRVGITAEGLGRDHWN
EMLAYPRKPIAHWHSLVEVKKSFKEGNPRL
Target Bioclass
Other
Family
Synaptotagmin family
Subcellular location
Membrane; Cytoplasm, cytosol; Cytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane
Function
May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis. May mediate Ca(2+)-regulation of exocytosis in acrosomal reaction in sperm.
Uniprot ID
Q5T7P8
Ensemble ID
ENST00000607941.5
HGNC ID
HGNC:18638

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
HCT15 SNV: p.H494N .
HT SNV: p.R177C .
HT115 SNV: p.P87S .
IGROV1 SNV: p.P303S .
JURKAT Deletion: p.P438RfsTer25 .
KYSE150 Deletion: p.F78SfsTer41 .
NCIH2172 Substitution: p.P301S .
SKMEL3 SNV: p.P437S .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 1 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
DBIA
 Probe Info 
C407(1.40)  LDD3423  [1]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0022  KB02 A673 C407(1.36)  LDD2261  [1]
 LDCM0023  KB03 A673 C407(1.17)  LDD2678  [1]
 LDCM0024  KB05 SK-ES1 C407(1.40)  LDD3423  [1]

References

1 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840