General Information of Target

Target ID LDTP06202
Target Name Glycine N-methyltransferase (GNMT)
Gene Name GNMT
Gene ID 27232
Synonyms
Glycine N-methyltransferase; EC 2.1.1.20
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MVDSVYRTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQR
VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMT
LDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNY
DHILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGSPGLSK
FRLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKRTD
Target Bioclass
Enzyme
Family
Class I-like SAM-binding methyltransferase superfamily, Glycine N-methyltransferase family
Subcellular location
Cytoplasm
Function
Catalyzes the methylation of glycine by using S-adenosylmethionine (AdoMet) to form N-methylglycine (sarcosine) with the concomitant production of S-adenosylhomocysteine (AdoHcy), a reaction regulated by the binding of 5-methyltetrahydrofolate. Plays an important role in the regulation of methyl group metabolism by regulating the ratio between S-adenosyl-L-methionine and S-adenosyl-L-homocysteine.
Uniprot ID
Q14749
Ensemble ID
ENST00000372808.4
HGNC ID
HGNC:4415
ChEMBL ID
CHEMBL4523295

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 1 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
DBIA
 Probe Info 
C58(1.32)  LDD3493  [1]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0022  KB02 AU565 C58(0.94)  LDD2265  [1]
 LDCM0023  KB03 CAL-148 C58(2.68)  LDD2702  [1]
 LDCM0024  KB05 ZR-75-1 C58(1.32)  LDD3493  [1]

References

1 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840